P39059  COFA1_HUMAN

Gene name: COL15A1   Description: Collagen alpha-1(XV) chain

Length: 1388    GTS: 1.782e-06   GTS percentile: 0.570     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 14      gnomAD_SAV: 823      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAPRRNNGQCWCLLMLLSVSTPLPAVTQTRGATETASQGHLDLTQLIGVPLPSSVSFVTGYGGFPAYSFGPGANVGRPARTLIPSTFFRDFAISVVVKPS 100
gnomAD_SAV:        KT #HS      IW   L  TINP    IKA F C   PMR VS LPRL IF     D  L H  R  T   C S   L  I      V IA  TN
Conservation:  1111110110001011100000000000111112123121658536784777457454484584398474235779966344481385279662435552
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                         
SS_PSIPRED:              HHHHHHHHHHHHHHHHHH              HHHHH       EEEEE      EEEE         HHHH        EEEEEEEE  
SS_SPIDER3:              HHHHHHHHHH HHHHHHH        H     HHHHH       EE  E    E EEEE    EE EEHHHH    H   EEEEEEEE  
SS_PSSPRED:             HHHHHHHHHHH                     HHHHHH       EEEE       EEEE       HHHHH         EEEEEEEE  
DO_DISOPRED3:  DDDDDDDDDBDDDDDDDDDDDDDDDDDDDDDDD DD                                                                
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                  
DO_IUPRED2A:                              DDDDD D                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            STRGGVLFAITDAFQKVIYLGLRLSGVEDGHQRIILYYTEPGSHVSQEAAAFSVPVMTHRWNRFAMIVQGEEVTLLVNCEEHSRIPFQRSSQALAFESSA 200
BenignSAV:                                                                   H                                     
gnomAD_SAV:    TIC DM  P A TL  F     W  S K S  Q     K S   M    V ##L LRN   SH TVTA    LAF MTY  Q HF   Q P  F  G NS
Conservation:  3128859995774174454795276243321935358875331117355758255265259247553653224283459462222141942229063225
SS_PSIPRED:         EEEEEE     EEEE EEHH       EEEEEE        EEEEEEE       EEEEEEEEE  EEEEEE     EEEE         EE   
SS_SPIDER3:        EEEEEEEE    EEEEEEEE   E   EEEEEEEE       E EEEEEEE     EEEEEEEEE  EEEEEE    EEEEE       EEEE   
SS_PSSPRED:         EEEEEE    HHHHH HEH        EEEEEE                      EEEEEEEE   EEEEEEE                      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            GIFMGNAGATGLERFTGSLQQLTVHPDPRTPEELCDPEESSASGETSGLQEADGVAEILEAVTYTQASPKEAKVEPINTPPTPSSPFEDMELSGEPVPEG 300
BenignSAV:        V                                                                                                
gnomAD_SAV:     N VCH  P E Q#   C R   M HN G HKKP  S   L   DS   HQ  RLT MF V#I I  LL    F H   L#A  FL   ID    L  K 
Conservation:  8595678844552393635746352153332343563434337742882120321121231211310110100205412753113114113134300211
SS_PSIPRED:     EEEE         EEEEEEEEEEE     HHHH                                                                  
SS_SPIDER3:    EEEEEE       EEE EEEEEEEE      HHH                         E EE                                     
SS_PSSPRED:     EEEEE           EEEEEEE       HHH                                                                  
DO_DISOPRED3:                                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                    DDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CARBOHYD:                                                                      T                                   

                       10        20        30        40        50        60        70        80        90     
AA:            TLETTNMSIIQHSSPKQGSGEILNDTLEGVHSVDGDPITDSGSGAGAFLDIAEEKNLAATAAGLAEVPISTAGEAEASSVPTGGPTLSMSTENPEEGVTP 400
BenignSAV:                                                                                               M         
gnomAD_SAV:        NI  VFLD N   R#SG     V  F     Y#   RSP T    E     D  SP  R  K A R     K     IRAS#V # S K G  D L
Conservation:  1111111111112213300002111101000211111111111111112121131111111111111111111111111111111111111111111111
SS_PSIPRED:                                                       HHH                                              
SS_SPIDER3:                                                      H  HH HH                                          
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CARBOHYD:           N                 N                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            GPDNEERLAATAAGEAEALASMPGEVEASGVAPGELDLSMSAQSLGEEATVGPSSEDSLTTAAAATEVSLSTFEDEEASGVPTDGLAPLTATMAPERAVT 500
BenignSAV:                                              T   R                                                      
gnomAD_SAV:    V  S  #ST  VT K K  T TTE LK GDMVSR    FI S R RKDD  D RG#GR  IVT   KAF RN      IWA #H   A #V V  KW   
Conservation:  2341341212232222223010101111112314212111312125100134103111111111111111111111111111111111111111111302
SS_PSIPRED:        HHHHHH     HHHHH                                                                          HHH   
SS_SPIDER3:        HHH H HH   HH                                                                                   
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SGPGDEEDLAAATTEEPLITAGGEESGSPPPDGPPLPLPTVAPERWITPAQREHVGMKGQAGPKGEKGDAGEELPGPPEPSGPVGPTAGAEAEGSGLGWG 600
BenignSAV:        V D                        R                                                                     
gnomAD_SAV:    PCTDEDGG     RG    I RV D S#TLS R L R    SA S #IAS   L  TE K   Q  EDNVE QF     LT    #M  T# VR    CS
Conservation:  2145022112121111111111143141145244565132222120111111111111111111111111111111111111111111012125462211
SS_PSIPRED:         HHHHHH                                                                                         
SS_SPIDER3:          HH HH                                                                                         
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:                                                               GMKGQAGPKGEKGDAGEE                           

                       10        20        30        40        50        60        70        80        90     
AA:            SDVGSGSGDLVGSEQLLRGPPGPPGPPGLPGIPGKPGTDVFMGPPGSPGEDGPAGEPGPPGPEGQPGVDGATGLPGMKGEKGARGPNGSVGEKGDPGNRG 700
BenignSAV:                                                                L                                        
gnomAD_SAV:    WEIS D   RLD K     H#R SV R   R  ET  S   V #S #  G  TD KT LL  KE L IG DAS SR    M*    S       E #S V
Conservation:  1111111112202132235346546557156135122312115335267138117228335348018028027118028247325217217246307118
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CARBOHYD:                                                                                            N             

                       10        20        30        40        50        60        70        80        90     
AA:            LPGPPGKKGQAGPPGVMGPPGPPGPPGPPGPGCTMGLGFEDTEGSGSTQLLNEPKLSRPTAAIGLKGEKGDRGPKGERGMDGASIVGPPGPRGPPGHIKV 800
BenignSAV:         L                                                                                               
gnomAD_SAV:    F E L EMAP D SE  EA#R   S ER     A     KG K   R      #  P  MV S#  E E HWV Q DK #  V TLE  RQ   R LMNF
Conservation:  1282292192091171284295474664352232012125425444011120211213312316228238229269419157132174663474692222
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:                                                                                                          KV

                       10        20        30        40        50        60        70        80        90     
AA:            LSNSLINITHGFMNFSDIPELVGPPGPDGLPGLPGFPGPRGPKGDTGLPGFPGLKGEQGEKGEPGAILTEDIPLERLMGKKGEPGMHGAPGPMGPKGPPG 900
gnomAD_SAV:    F  FFFI IQ II CL VAG  R L L R     E  CL   E G#A S L   I    K RKL  V   G   V       KSE#R   E K SR  L 
Conservation:  3222424151311634221331621733716636686534844841812622712823544756623333534323246069419119219227729239
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:        LSNSLINITHGFMNFSDIPELV                                             LTEDIPLERLM                      
CARBOHYD:            N      N                                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            HKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQGPPGLPGPPGPPGPPGAVINIKGAIFPIPVRPHCKMPVDTAHPGSPELITFHGVKGEKGSWGLPGSKGE 1000
BenignSAV:                                                                                             R           
gnomAD_SAV:    R E    HR# VSSV S F   R # EFVV V        DST  R #MS M ETV  TSIQ    V   IPR      V#V AI R R  R      RK
Conservation:  2694482884495392191472495162221613937947934815613134472445233542642212111222121121111111111111121465
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:                                                                                           GVKGEKGSWGLPGSKGE

                       10        20        30        40        50        60        70        80        90     
AA:            KGDQGAQGPPGPPLDLAYLRHFLNNLKGENGDKGFKGEKGEKGDINGSFLMSGPPGLPGNPGPAGQKGETVVGPQGPPGAPGLPGPPGFGRPGDPGPPGP 1100
BenignSAV:     R                                                             L                                     
gnomAD_SAV:    RV#H #     LL  I  R P    MR    # #  D   G RNN DN  V#WL   HRKL LSSP #D IL  R H       ETL S        L T
Conservation:  5541613826513120212111122131125306017258438522111313824723824622536544539439239138249259492292394494
SS_PSIPRED:                   HHH                                                                                  
SS_SPIDER3:                   HHHH H                                                                               
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:        KGDQGAQGPPGPPLDLAYLRHFLNNLKGENGDKGFKGEKGEKGDINGSFLMS                                                
CARBOHYD:                                                   N                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            PGPPGPPAILGAAVALPGPPGPPGQPGLPGSRNLVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIPADSPPPPALSSNPHQ 1200
gnomAD_SAV:    L T E   M   #MV  D  D    S#  R  KV      L      TY   G#I V        Y HII DR    PE    L #GR  #AV  NKSY 
Conservation:  4944833302133222374586584772331242423513112403131011574435412243565643268444577285204123342312342212
SS_PSIPRED:                                                           EEE                HHH                       
SS_SPIDER3:                                                    E      E E         E            EEE                 
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DD       DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD             DDDDD      D D DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                        DD DDDDDDDDDDDDDDDDD
REGION:               AILGAAVALPGPPGPPGQPGLPGSR                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            LLPPPNPISSANYEKPALHLAALNMPFSGDIRADFQCFKQARAAGLLSTYRAFLSSHLQDLSTIVRKAERYSLPIVNLKGQVLFNNWDSIFSGHGGQFNM 1300
gnomAD_SAV:           #L V       R TS SLLCC # #   E   R  T   FY C#     R     AV   T  HRIH   I DRLV   R     D R#H   
Conservation:  1114102021010121384769993933944356227437622376131545746334445235743134122975956553671561568341650531
SS_PSIPRED:                                      HHHHHHHHH    HHHHHHHHHHHHHHHHH  HHHH           EEE  HHHHH         
SS_SPIDER3:                       H          HHHHHHHHHHHHH      HHHHHHHHHH HHHH                 EEE  HHHHH         
SS_PSSPRED:                       HHH            HHHHHHHHHH     HHHHHHHHHHHHHHHHH               EE   HHH           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDD       DDDD                                                                   
DO_SPOTD:      DDDDDDDDDDDDDDD                                                                                     
DO_IUPRED2A:   DD DDDDD                                                                                            
DISULFID:                                          C                                                               

                       10        20        30        40        50        60        70        80        
AA:            HIPIYSFDGRDIMTDPSWPQKVIWHGSSPHGVRLVDNYCEAWRTADTAVTGLASPLSTGKILDQKAYSCANRLIVLCIENSFMTDARK 1388
BenignSAV:                                    I                                                        
gnomAD_SAV:     T KHP  S* LK E   L  LT R F L  FC  G H   R*PVY S M  # L GMAN  E E C   #W      K RLIINTG 
Conservation:  2265679676664255477372579874118153232594374322123382451713624427314464424455757543211111
SS_PSIPRED:       EEEE             EEEE          HHHHHHHH                             EEEEEEEE HH      
SS_SPIDER3:       EEEE              EEE        E  HHHHHHHH   HHH           EEEEE       EEEEEEE E       
SS_PSSPRED:        E               EEE             HHHHHHH   HHH                      EEEEEEEE         
DO_DISOPRED3:                                                         DDDDD                       DDDDD
DO_SPOTD:                                                                                         DDDDD
DO_IUPRED2A:                                                                                           
DISULFID:                                            C                             C       C