P45452  MMP13_HUMAN

Gene name: MMP13   Description: Collagenase 3

Length: 471    GTS: 1.933e-06   GTS percentile: 0.630     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 6      BenignSAV: 5      gnomAD_SAV: 274      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MHPGVLAAFLFLSWTHCRALPLPSGGDEDDLSEEDLQFAERYLRSYYHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPD 100
PathogenicSAV:                                                                       T  SS               T         
BenignSAV:      L     V                                                                                            
gnomAD_SAV:    V S A #VL C  C  YQV   L# #  HN  #D  E  KC  #    #I  T*N  D     T    Q      # A   Q   S S I  N  *R   
Conservation:  3001010021221000002142001111011001310244196125711002110111101112114434690763611670660193137224798477
STMI:          SSSSSSSSSSSSSSSSSSS                                                                                 
SS_PSIPRED:      HHHHHHHHHHHHHHHH              HHHHHHHHHHHHHH      HHHHHHH  HHHHHHHHHHHHHH         HHHHHHHH        
SS_SPIDER3:      HHHHHHHHHHHHHHH               HHHHHHHHHHHHH          HH     HHHHHHHHHHHH    E E   HHHHHHHH  E     
SS_PSSPRED:      HHHHHHHHHHHHHHHH              HHHHHHHHHHHHHH       HHHHH  HHHHHHHHHHHHHHH         HHHHHHH         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                               DD   D      DDDDD           D D  DDDDBB
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                        
DO_IUPRED2A:                           D D   D                                                                     
PROPEP:                           LPLPSGGDEDDLSEEDLQFAERYLRSYYHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPD
MOTIF:                                                                                                      PRCGVPD
METAL:                                                                                                        C    

                       10        20        30        40        50        60        70        80        90     
AA:            VGEYNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAH 200
BenignSAV:                                                              N                                          
gnomAD_SAV:    L K #L  Q V   T        S # EI     QEVLT G E  CNE A   AS YN    T    V TGR    L  A#     R LS ET C  V  
Conservation:  3226232211369131156736137735611038413421762495264492924211217863529212297924798962749698729504279848
SS_PSIPRED:                    EEEEEEEE      HHHHHHHHHHHHHHHHH    EEEE       EEEEEE                EEEE            
SS_SPIDER3:       H           E  EEEEEEE     HHHHHHHHHHHHHHHH      EEE    E EEEEEEEE              EEEE           EE
SS_PSSPRED:                     EEEEEEE      HHHHHHHHHHHHHHHH      EEEE      EEEEEE                                
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                  D   D
PROPEP:        VGE                                                                                                 
MOTIF:         V                                                                                                   
METAL:                                    D                                 D         H D    DG S L  H      N G D H
CARBOHYD:                      N                                  N                                                

                       10        20        30        40        50        60        70        80        90     
AA:            FDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGET 300
PathogenicSAV:       G                        N                                                                    
BenignSAV:                                                             V                                           
gnomAD_SAV:     Y  KNGP    D # LVA VR  S   #      TE  I  VC  ASENYST# EVN * FR VC L  K RHS    MLE Y TF    T  N *A  
Conservation:  8965808613014367428759959969962992431769682620001112184059203841995210000010050133182202156644143323
SS_PSIPRED:                   HHHHHHHHHHH                             HHHHHHHHHHH                         EEEEE  EE
SS_SPIDER3:                  EHHHHHHHHHHHH            E  EEE    H     HHHHHHHHHHH                       EEEEEEE   E
SS_PSSPRED:                  HHHHHHHHHHHHH                 EE         HHHHHHHHHH                        HHHHHHH   E
DO_DISOPRED3:                                                                           DDD  D                     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDD                                                           DDDDDDDDDDDDDDDDDDDDDDD               
METAL:          DD E                H   H     H       M                                                  D I       
ACT_SITE:                            E                                                                             
DISULFID:                                                                                         C                

                       10        20        30        40        50        60        70        80        90     
AA:            MIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN 400
BenignSAV:                                                                                              G          
gnomAD_SAV:    IT   K  #H R    EV RL MT I      CVE   V  Y     V S   L ## V*A#  A    KP M#    #  # S AY KGA        S
Conservation:  2445233393211100131311322336151216686631402313336351238333330211412427114867104216575543020246478323
SS_PSIPRED:    EEEE  EEEEE         EEHHHH         EEEEE    EEEEEE  EEEEEE           HHH        EE EEEEE    EEEEEE  
SS_SPIDER3:    EEEE  EEEEE        E HHHHH         EEEEE    EEEEEE  EEEEE  EEE       HHHH       EEEEEEEE     EEEEE  
SS_PSSPRED:    EEE    EEE        HHH              EEEEE    EEEEE   EEEEE                        EEEEEEE    EEEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                           D A                                             S A               
MODRES_P:                                                                       Y                                  

                       10        20        30        40        50        60        70 
AA:            QVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPANSILWC 471
gnomAD_SAV:     ISSC    N  YE  L         T   AE##       CIL R MH KCG# N HM SITS  #V   
Conservation:  05677650111641239505123637411256872211523454141023155110214212112423417
SS_PSIPRED:    EEE EE             HHHH         EEEEE  EEEEEE   EEEEE    EEEEEE        
SS_SPIDER3:    EEEE               HHHH         EEEEE  EEEEEE  EEEEEE    EEEEEEE       
SS_PSSPRED:    EEEEE                           EEEEE  EEEEEE   EEEE     EEEEE         
DO_DISOPRED3:                                                                         
DO_SPOTD:                                                                             
DO_IUPRED2A:                                                                          
METAL:                                        D V                                     
DISULFID:                                                                            C