P48431  SOX2_HUMAN

Gene name: SOX2   Description: Transcription factor SOX-2

Length: 317    GTS: 5.785e-07   GTS percentile: 0.065     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 9      BenignSAV: 1      gnomAD_SAV: 108      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MYNMMETELKPPGPQQTSGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRAL 100
PathogenicSAV:                                           W  K S                         P                      P   
gnomAD_SAV:    I    Q       L   #R ASVH I  T V   N G   #                    K S                    M             G 
Conservation:  1122211221120111112210111111111010100123425744757675474957766669766779779679647636363575666576679664
SS_PSIPRED:                                         HHH     HHHHH  HHHHHHHHHH     HHHHHHHHHHHHH   HHHH   HHHHHHHHHH
SS_SPIDER3:                                                   EEEE HHHHHHHHHH      HHHHHHHHHHHH   HHH   HHHHHHHHHHH
SS_PSSPRED:                                                  EHHHH HHHHHHHHHH     HHHHHHHH HHHHH  HHH  HHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                          
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   D  D D DDDDDDDDDD 
DNA_BIND:                                              VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRAL

                       10        20        30        40        50        60        70        80        90     
AA:            HMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQLGYPQHPGLNAHGAAQMQPMHRY 200
PathogenicSAV:            A          G      A                                                                      
gnomAD_SAV:                   A # #  V     SA  G  S       R   D     KEL  G         S     H # SHS  #S  V  TV  E     
Conservation:  7554667686483533633435655353632242432451111434122213221213241323563244432342212343334443421223324345
SS_PSIPRED:    HHHH            HHH                                        HH         HHHHHHH                       
SS_SPIDER3:    HHHH                                                                                                
SS_PSSPRED:    HHHH                                                                                                
DO_DISOPRED3:            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDD DDD   D D     DDD             D             DD DDDDDDDDDDDDDDDDDD D    
DNA_BIND:      HMKEHPDYK                                                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            DVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQS 300
PathogenicSAV:                                 R                                                                   
BenignSAV:                                                                       T                                 
gnomAD_SAV:     L            S I   T    T L   A   T S #S      SI #S    P  Q # TR         N  F S   S  PV#T  N#  R H 
Conservation:  3423324233224238533232132122222113143322423223440116221223122331201534324332443332224211324210231111
SS_PSIPRED:      HHH                                                                HHHHHHH              HH        
SS_SPIDER3:       H                                                                     E                          
SS_PSSPRED:                                                                         HHHHHH                         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:     DDD     DD        DDDDD DDD      DDDDDDDDD DDDDDDDDDDDDDDDDDDDDDD        DDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                        S                                                 

                       10       
AA:            GPVPGTAINGTLPLSHM 317
gnomAD_SAV:      A   T   R S    
Conservation:  32222111231121111
SS_PSIPRED:                     
SS_SPIDER3:                     
SS_PSSPRED:                     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDD