P48742  LHX1_HUMAN

Gene name: LHX1   Description: LIM/homeobox protein Lhx1

Length: 406    GTS: 7.744e-07   GTS percentile: 0.129     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 149      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLST 100
gnomAD_SAV:      R  V R A      SK   GT    G   Y R     D  C  DD PF  K      R          Y     W     L   K       #     
Conservation:  2100131122112012101111114211102223010211221232222222013133464363761243342344633433546524548328433433
SS_PSIPRED:                 HHHEEE   EE                 EEEE  EEE  HHHHHHH            HHHHHHH    EEEE              
SS_SPIDER3:    E EE     E   HHEEEE     EE H EHHE   E   E EEE  EEEEE   HH              HHH EEE   EEEEE  EE      E   
SS_PSSPRED:      E         HHHHHHH    HHHH             HHH     EE    HHHH             HHHHH      EEEEE             
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            GEELYIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFA 200
gnomAD_SAV:    S V C   #          ND R    K   L  M T HT   E       Y  G D     E        EHK   S                   T  
Conservation:  5453344452443554651421111422131422223335355423421156086371412686511134464432348965685554656543643732
SS_PSIPRED:       EEEE   EEEE       HHHHHHH                                                          HHHHHHHHHHHHHH
SS_SPIDER3:      EEEEEE  EEEE        HH                                                                HHHHHHHHHHHH
SS_PSSPRED:       EEEE   EEEE                                                                         HHHHHHHHHHHHH
DO_DISOPRED3:                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD             
DO_SPOTD:                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D DDDDDD
DNA_BIND:                                                                                     RRGPRTTIKAKQLETLKAAFA
MODRES_P:                                                                   S                                      

                       10        20        30        40        50        60        70        80        90     
AA:            ATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLVDRLEPGELIPNGPFSFYGDYQSEYYGPGGNYDFFPQGP 300
gnomAD_SAV:     AA     T K     I  S                   *         DC     GLQA L G        D   P                NL    R
Conservation:  3263534223434333344243554202112121022111131320211000422242222212111111312232112212011202231232222133
SS_PSIPRED:          HHHHHHHHHHH      EEHH       HHHHHHHHHHHHHH                             HH                     
SS_SPIDER3:          HHHHHHHHHHH   H HEEEEH       HHHHHH    HHH                                                    
SS_PSSPRED:    H     HHHHHHHHHHH     EEEE      HHHHHHHHHHHHHHHHHH                                                  
DO_DISOPRED3:                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                 D    D
DO_IUPRED2A:   DDDDDDDDDDDDDDDD        DD   D    D DDDDDDDDDDDDDD  DDDDDDDD DDDDDDD                     DD DDDDDDDD
DNA_BIND:      ATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMK                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            PSSQAQTPVDLPFVPSSGPSGTPLGGLEHPLPGHHPSSEAQRFTDILAHPPGDSPSPEPSLPGPLHSMSAEVFGPSPPFSSLSVNGGASYGNHLSHPPEM 400
gnomAD_SAV:    Q     I    H  R #R    LVD PQR  R  N# RKV   I   T  ARH SN KSR  R  RA   D C   R  #     R S   S  F HT V
Conservation:  4311211311334211132111213121131121313120221111112142224162321131210123222211211101110131111213112120
SS_PSIPRED:                                                                                                     HHH
SS_SPIDER3:                                                                                                     HH 
SS_PSSPRED:                                                                                                     HHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDD DDDDDDDDDDDDDDDDDDDD

                     
AA:            NEAAVW 406
gnomAD_SAV:    DD#S  
Conservation:  111212
SS_PSIPRED:    H     
SS_SPIDER3:          
SS_PSSPRED:          
DO_DISOPRED3:  DDDDDD
DO_SPOTD:      DDDDD 
DO_IUPRED2A:   DDDDDD