P49585  PCY1A_HUMAN

Gene name: PCYT1A   Description: Choline-phosphate cytidylyltransferase A

Length: 367    GTS: 1.972e-06   GTS percentile: 0.643     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 7      BenignSAV: 6      gnomAD_SAV: 147      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MDAQCSAKVNARKRRKEAPGPNGATEEDGVPSKVQRCAVGLRQPAPFSDEIEVDFSKPYVRVTMEEASRGTPCERPVRVYADGIFDLFHSGHARALMQAK 100
PathogenicSAV:                                                                                                   # 
BenignSAV:                        R                                                                                
gnomAD_SAV:      ERY         TRGV R#SR A   R   R  LYTLD W RSL CGKT       C G SVGDD   STG Q   I  Y    F Y D T*    V 
Conservation:  7312121010134442500433310211100031121204722776647432110012717643456117650397999999999949979999999999
SS_PSIPRED:      HHH   HHHHHHHH                      EE                       HHHHH        EEEEEEE      HHHHHHHHHHH
SS_SPIDER3:              HHHH                                      H      EE  HHHH         EEEEEE       HHHHHHHHHHH
SS_PSSPRED:             HHHHHHH                                              EHHH          EEEEE  EH H  HHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                      
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                            
DO_IUPRED2A:        DDDDDDDDDDDDDDDDDDDDDDDDDD  DDD                             D      D                           
NP_BIND:                                                                                          IFDLFHSGH        
MODRES_A:             K                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            NLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGI 200
PathogenicSAV:                         M   K                    A                                        L         
BenignSAV:                                                                K                                        
gnomAD_SAV:    K       V         Y L   M   QS CC V    C         A K  SK  SK Q   I        TVSTV      E        #   D 
Conservation:  2999977777579793797549999995739999653999999955759997977597239577777975597397559999479949999799999799
SS_PSIPRED:    HH    EEEEEE  HHHHHH        HHHHHHHHHH     EEE        HHHHHH    EEEE            HHHHHHHH  EE        
SS_SPIDER3:    HH    EEEEEE  HHHHHH        HHHHHHHHH      EE         HHHHHH    EEEE   E        HHHHHHH    E E      
SS_PSSPRED:    HH    EEEEEE  HHHHHHH       HHHHHHHHHH     EEE        HHHHHHH   EEEE            HHHHHHHH            
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                                                                          HD                          RTEGI
BINDING:                            K                            W                     Y                           

                       10        20        30        40        50        60        70        80        90     
AA:            STSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALK 300
PathogenicSAV:                       S                                                                             
BenignSAV:                                        S                                                                
gnomAD_SAV:        V  *  W     V W  *             SK            R                M      F  R     #  V  S Q  RL   P 
Conservation:  9999777997757759599999999999999799997777799977777745966779677976577746567599699999999967997899979586
SS_PSIPRED:     HHHHHHHHHH HHHHHHHHHH    HHHH   HHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHH
SS_SPIDER3:     HHHHHHHHHH HHHHHHHHHH    HHHH   HHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHH    HHH
SS_PSSPRED:     HHHHHHHHHHHHHHHHHHHHHH   HHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                     DD                                                
MODRES_P:                                      S                                                                   

                       10        20        30        40        50        60       
AA:            HMLKEGKGRMLQAISPKQSPSSSPTRERSPSPSFRWPFSGKTSPPCSPANLSRHKAAAYDISEDEED 367
BenignSAV:                 V                       L                          V   
gnomAD_SAV:         R D    T  L  NS    ACKH SASP **L  C   L #PS SF K# GT  G ND    
Conservation:  5677996695475657466844583444564927345632422251580001000212203442342
SS_PSIPRED:    HHHHHHHHHHHHH                                     HHHHHHHH         
SS_SPIDER3:    HHHHHHHHHHHHH                                     HHHHHH           
SS_PSSPRED:    HHHHHHHHHHHHH                                       HHHHH          
DO_DISOPRED3:              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:                          SPSSSPTRERSPSPSFRWPFSGKTSPPCSP                   
MODRES_P:                    S   S SSS T   S S S        TS   S    S         S