P49711  CTCF_HUMAN

Gene name: CTCF   Description: Transcriptional repressor CTCF

Length: 727    GTS: 3.062e-07   GTS percentile: 0.010     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 8      BenignSAV: 4      gnomAD_SAV: 175      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEGDAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQMVMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQV 100
BenignSAV:                                             A                                                           
gnomAD_SAV:      C   K              K     CW  A      DVA SKMGVD M RE   #  V      EH VVH     VA   P        H        
Conservation:  9422224232543434262752566647779204201211141221302331232234455754299476495966445227232234459447999997
SS_PSIPRED:           HHH              HHHHH      HHH          EEEEEEEEE  HHHHHH  HHHHHHHHHHHHHHH   EE        EEEEE
SS_SPIDER3:         HHHHHH    E       HH HH                     EEEEEEEE  HHHHH   HHHHHHHHHHHHH     EEEEE     EEEEE
SS_PSSPRED:        HHHHHHH          HHHHHHH                           HHHHHHHHHH  HHHHHHHHHHHHHH  HHHHH       EEEEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D   D                                       D     DD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD       DDDDD  DDDDDDDDDDDDD     DD      DDDDD     
DO_IUPRED2A:   DDDDDDDDDDDDDD  D  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DD     DD  DDDDDDDDDDD DDDDDDDDDD   DD D   

                       10        20        30        40        50        60        70        80        90     
AA:            VNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELPPQEDPSWQKDPDYQPP 200
gnomAD_SAV:     D#      V       I  SM A   AA I G R   K  #A  D GD   I                  S    AI R K   R  #         LR
Conservation:  9945774445536577697734577643337429544447433521224256497999999997997999779977757424422222214149745394
SS_PSIPRED:    E            EEEE     EE      HHHHHHHH               EEEE       EEEEE     EEEEEE                    
SS_SPIDER3:    E      E       EE    E        HHHH H HH  H           EEEEE     EEEEEE     EEE E  E                  
SS_PSSPRED:                   EE     EEEE     HHHHHHHHH             EEEE       EEEEE      EEEE                     
DO_DISOPRED3:  D D DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                      DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   D         DDD            DD DDDDDDDDDDDDDDDDDDDDDDDDDDD               DD  DDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            AKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG 300
PathogenicSAV:                                                                                   H                 
gnomAD_SAV:    T      R   VC A     A            D          MAV V            I           K   H                      
Conservation:  3771952575475747535557777777775977977779779957979797775999997997999979999957599999999799799999997997
SS_PSIPRED:                        EEE     EEEEE                                                 HH                
SS_SPIDER3:                 E     EEEEEEEEEEEEEE      E     E                   E       E       H HEE       E  HH  
SS_PSSPRED:                        EEE    HHHHH                                                 HHH                
DO_DISOPRED3:  DDDDDDDDDDDD          DDD DDDDDDDDDDDDDDDDDDDDDDDDDD  DD        D                                   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDD       DDDD       D  DDDDDDDDDDDDDDDDDDDDDDD                      DDDDDDD            
ZN_FING:                                                                        FQCELCSYTCPRRSNLDRHMKSH     HKCHLCG
MODRES_P:                                                                                              T           

                       10        20        30        40        50        60        70        80        90     
AA:            RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRT 400
PathogenicSAV:                                          C                 I       S        S                       
gnomAD_SAV:                            A           W   #       E                                                T  
Conservation:  7979977797997999975475792775777777995777777777577977775777574577557555977975797795799977977777777797
SS_PSIPRED:              HH                 EEE     EEE                  EEE                                     EE
SS_SPIDER3:     H   E   H  E        E   H   E  EE   E            E       EE  E  E   E        E       E       E  E  
SS_PSSPRED:                                 E EE  EEEEEE                                                           
DO_DISOPRED3:                                                                                                      
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:            DDDD                          D D                         D D                        DDDD  
ZN_FING:       RAFRTVTLLRNHLNTH     HKCPDCDMAFVTSGELVRHRRYKH     FKCSMCDYASVEVSKLKRHIRSH     FQCSLCSYASRDTYKLKRHMRT
MODRES_P:                      T                                                        T                          

                       10        20        30        40        50        60        70        80        90     
AA:            HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQC 500
PathogenicSAV:       C                                               Q                                             
gnomAD_SAV:                 V            #             N  I   *   W                               R         H      
Conservation:  7777797575575757595755755557555777575775757457777797777999777545355779995749779777777777757777777537
SS_PSIPRED:                                                EEE      HHH                         HHHH               
SS_SPIDER3:          EE      E  E  E E      E       E      EE       E  H                 E     HHH  H           HHH
SS_PSSPRED:                  EEE                          EEEEEE   HHH                   HHHHHHHHHHHHHH           H
DO_DISOPRED3:                                  DD                                                   DDDDDDDDDD  DD 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 
DO_IUPRED2A:                         D                                                                             
ZN_FING:       H     YECYICHARFTQSGTMKMHILQKH      FHCPHCDTVIARKSDLGVHLRKQH      KKCRYCDAVFHERYALIQHQKSH     FKCDQC
MODRES_P:       S                                                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            DYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR 600
PathogenicSAV:                                                                   W                                 
BenignSAV:                                                                                              Q          
gnomAD_SAV:              V            T  Q G   G              S  I V             Q          V S  I R     M E  HR   
Conservation:  5745775779597595777777557347574797777775775757773749345472572547777466366343816320022655212643449767
SS_PSIPRED:      EEE       EEEE              EEE      EE EE                  EEE      HHHHHH                       
SS_SPIDER3:    HHH          E        EE      EE      E     E       E EE      EE    HHHHHHHH                        
SS_PSSPRED:    HHHHHHHHHHHHH                 HHHHH HHHHHHHH                      HHHHHHHHHH                        
DO_DISOPRED3:                                                                                                      
DO_SPOTD:      DDD DDDDDDDDDDDDDDDDDDD   DDDDD  DDDDDDDDDDDDDDDDDDDD       DDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:              DDDDDD                     D   D                        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
ZN_FING:       DYACRQERHMIMHKRTH     YACSHCDKTFRQKQLLDMHFKRYH        FVCSKCGKTFTRRNTMARHADNC                       

                       10        20        30        40        50        60        70        80        90     
AA:            KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGE 700
BenignSAV:                                               S                                                     T   
gnomAD_SAV:      GP NK    I   A    H K G  S L #     LE # S  # S  W       IS   K  S  M     R A  #K  V#      E DLTGE 
Conservation:  7644436334443124232233243342213121125223125266636546766975222322132242424364134344456677645010111102
SS_PSIPRED:                     HHH        HHH                                      EEEEE      EEEEEEEE            
SS_SPIDER3:                                  E                                      EEEHE      E EEEEEE            
SS_PSSPRED:                                                                          EEEE      EEEEEEE             
DO_DISOPRED3:     DDDDDDDDDDD                DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD        DDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:              SS S                                                                                        

                       10        20       
AA:            EEEAQPAATDAPNGDLTPEMILSMMDR 727
gnomAD_SAV:         S V EVS R     V      W
Conservation:  121112022234566796567776655
SS_PSIPRED:                     HHHHHH    
SS_SPIDER3:                     HHHHHH    
SS_PSSPRED:                     HHHHHHH   
DO_DISOPRED3:  DDDDDDDDDDDDD      D     DD
DO_SPOTD:      DDDDDDDDDDDDDDD         DDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDD