P49768  PSN1_HUMAN

Gene name: PSEN1   Description: Presenilin-1

Length: 467    GTS: 7.549e-07   GTS percentile: 0.122     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 124      BenignSAV: 3      gnomAD_SAV: 161      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MTELPAPLSYFQNAQMSEDNHLSNTVRSQNDNRERQEHNDRRSLGHPEPLSNGRPQGNSRQVVEQDEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATI 100
PathogenicSAV:                                                                               V  LT PC LL  S   F    
gnomAD_SAV:    V   L L       HT      NSS C H  S  WE Q HG#      A CD QSR   W #     G          GR   #        VM  A   
Conservation:  2222222222222121131121110222211101011000011011221100000111101111023257852435455565557536544543566467
STMI:                                                                                            MMMMMMMMMMMMMMMMMM
SS_PSIPRED:                                                                         HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
SS_SPIDER3:                                                                 HHHH HHHHHHHHHHHHHHHHHH HHHHH HHHHHHHEE
SS_PSSPRED:              HHH                                                        HHHHHHHHHHHHEHHHHHHHHHHHHHHEEEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  
DO_IUPRED2A:          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                
MODRES_P:                                                S       S                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            KSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVAL 200
PathogenicSAV:     #       P ###  # A            # T #  I#  #I     VN        # #P  #FP WM  L     VD                
gnomAD_SAV:    E   L  Q              QA       A       N       VF       SFC        V       C      W L   CDITG  V #  
Conservation:  4553563342485445542425213545352424462444445425433552444468637967995396856893844568279567975649436424
STMI:          MMM                             MMMMMMMMMMMMMMMMMMMMM             MMMMMMMMMMMMMMMMMMMMMMM     MMMMMM
SS_PSIPRED:    E           EEEEE       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHH
SS_SPIDER3:    EE            EEE       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHH    HHHHHHHHH      HHHHHH
SS_PSSPRED:    EEE         EE          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                  D                                                                       
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LIWNFGVVGMISIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAE 300
PathogenicSAV:      #  #  Y#Y  R P  P      F # # #  M       E   S     S   V###L S# # V      # # #  VV  C           
BenignSAV:         L                                                       G                                       
gnomAD_SAV:     FC SA L I   Y   LFQ      V                     L  A      L  F L V RHV I   L    M         AIM     S 
Conservation:  3667994777466799999299969994799997969777776975969743476655466556389775666775655665694666743437223442
STMI:          MMMMMMMMMMMMMMMM    MMMMMMMMMMMMMMMMMMMMM       MMMMMMMMMMMMMMMMMMMMMMMM                            
SS_PSIPRED:    HHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHH      HHHEEEE         
SS_SPIDER3:    HHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHH       EEEEEE EEEEE    
SS_PSSPRED:    HHHHHHHHEEEEEEE   HHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHEEE     HHHHHHHHHHH      EEEEE           
DO_DISOPRED3:                                                                                                  DDDD
DO_SPOTD:                                                                                                        DD
DO_IUPRED2A:                                                                                                       
REGION:                                                                                               YSS          
SITE:                                                                                                    TMV    MA 
ACT_SITE:                                                              D                                           

                       10        20        30        40        50        60        70        80        90     
AA:            GDPEAQRRVSKNSKYNAESTERESQDTVAENDDGGFSEEWEAQRDSHLGPHRSTPESRAAVQELSSSILAGEDPEERGVKLGLGDFIFYSVLVGKASATA 400
PathogenicSAV:           R                     G                                            #  #  A     I #F       
BenignSAV:                      G                                                                                  
gnomAD_SAV:      L S #   R P    G     L  PAV   G R  G   V  G Q   #H IA  Q TL QPA R  S  H    A                     S
Conservation:  0122222222222222222222011100110423543123102210112101110123112221221011122255524464544644434835453334
STMI:                                                                                          MMMMMMMMMMMMMMMMMMMM
SS_PSIPRED:      HHHH          HH                    HHHHH           HHHHHHHHHHHH            EEE       HHHHHHHHHH  
SS_SPIDER3:        H             H                   HHHHH           HHHHHHHHHH              EEE     HHHHHHHHHHHHH 
SS_PSSPRED:      HHH                                                  HHHHHHHHHH              E      EEEEHHHHHHHHH 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                        
DO_IUPRED2A:        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDD                                           
REGION:                                                                               EDPEERGVKLGLGDFIFYSVLVGKASAT 
SITE:                                                      DS                                                      
ACT_SITE:                                                                                          D               
MODRES_P:               S                                   S                    S                                 

                       10        20        30        40        50        60       
AA:            SGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFATDYLVQPFMDQLAFHQFYI 467
PathogenicSAV:        T Y       F     V P    E S ##                               
gnomAD_SAV:          S#   I L     F      V R       F VA   # C V      S     # R    
Conservation:  4443234544543554564325454422324232532432353343442224337434153234323
STMI:          M      MMMMMMMMMMMMMMMMMMMMM    MMMMMMMMMMMMMMMMMMMMM              
SS_PSIPRED:       HHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHH     
SS_SPIDER3:       HHHHHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHHHHHHHHHHH     
SS_PSSPRED:       HHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHH H  
DO_DISOPRED3:                                                                     
DO_SPOTD:                                                                         
DO_IUPRED2A:                                                                      
MOTIF:                                         PAL                                
REGION:                                       LPA                             QFYI