P49810  PSN2_HUMAN

Gene name: PSEN2   Description: Presenilin-2

Length: 448    GTS: 1.975e-06   GTS percentile: 0.644     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 9      BenignSAV: 8      gnomAD_SAV: 257      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLTFMASDSEEEVCDERTSLMSAESPTPRSCQEGRQGPEDGENTAQWRSQENEEDGEEDPDRYVCSGVPGRPPGLEEELTLKYGAKHVIMLFVPVTLCMI 100
PathogenicSAV:                                                                                     V               
BenignSAV:                                                      R   D       H       RW                             
gnomAD_SAV:    TFK     NK DG   WM  IL K LAL#F #KSS #  V D  V*   R DKD S     H IYN ASRLLRA    P FTCEV  LFL       #TV
Conservation:  2212222113310112422321121211110111010111100000110111110000121222212220111107852435455565557536544543
STMI:                                                                                                 MMMMMMMMMMMMM
SS_PSIPRED:                                                                                HHHHHHH  HHHHHHHHHHHHHHH
SS_SPIDER3:                                                HHH                             HHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:                                                                                 HHHHHH H HEHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDD  DDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                
MODRES_P:                           S  S    S                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            VVVATIKSVRFYTEKNGQLIYTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLLFLFTYIYLGEVLKTYNVAMD 200
PathogenicSAV:                      #                  #      I                                                    
BenignSAV:                                  L                                           V                          
gnomAD_SAV:    M      C H      #   CM L   ITL  H#    LP S LI#GI  IV V WM   R H *   N    VC V M  H ICV  A     CSESL 
Conservation:  5664674553563342485445542425213545352424462444445425433552444468637967995396856893844568279567975649
STMI:          MMMMMMMM                              MMMMMMMMMMMMMMMMMMMMM       MMMMMMMMMMMMMMMMMMMMM             
SS_PSIPRED:    HHHHHH            EEEEE       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      
SS_SPIDER3:    HHHHEHEE   E       EEEE       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHH HHHHHHHHH      
SS_PSSPRED:    HHHHEEEEEE                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:      DDDD                                                                                                
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            YPTLLLTVWNFGAVGMVCIHWKGPLVLQQAYLIMISALMALVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVW 300
PathogenicSAV:                                       #                                                             
gnomAD_SAV:     L        LRTMV         VA L  C M   VPLS  L  HF    T I  ST  L   M     RRT  VP   S  G   V  VVLC   T  
Conservation:  4364243667994777466799999299969994799997969777776975969743476655466556389775666775655665694666743437
STMI:          MMMMMMMMMMMMMMMMMMMMM  MMMMMMMMMMMMMMMMMMMMM     MMMMMMMMMMMMMMMMMMMMM                              
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHH       HHHEEEE   
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHH H  HHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHEE    HHHHHHHHHHH       EEEEE EEEE
SS_PSSPRED:    HHHHHHHHHHHHHHEEEEEEE   HHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHEEEE     HHHHHHHHHHH      EEEEE    E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
ACT_SITE:                                                                    D                                     

                       10        20        30        40        50        60        70        80        90     
AA:            TVGMAKLDPSSQGALQLPYDPEMEEDSYDSFGEPSYPEVFEPPLTGYPGEELEEEEERGVKLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLC 400
BenignSAV:                                                                                            M            
gnomAD_SAV:    M   V    P  S F   CNLG G*  H  S QA   KA A#   # #RVG       AM    RN       A  VP M REYRHIM V SM  FL   
Conservation:  2234420101211010110431022101121011101221221011131222232555244645446444348354533344443234544543554564
STMI:                                                                       MMMMMMMMMMMMMMMMMMMMM      MMMMMMMMMMMM
SS_PSIPRED:                                                         HHHHH            HHH HHHHHH   HHHHHHHHHHHHHHHHH
SS_SPIDER3:    EE                                                HHHHHHHH  E        HHHE  HHHH     HHHHHHHHHHHHHHHH
SS_PSSPRED:    EE                                                  HHHHH              HHHHHHHHH    HHHHHHHHHHHHHHHH
DO_DISOPRED3:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                             
DO_SPOTD:          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                 
DO_IUPRED2A:                                                 DDDDDDD                                               
ACT_SITE:                                                                       D                                  

                       10        20        30        40        
AA:            LTLLLLAVFKKALPALPISITFGLIFYFSTDNLVRPFMDTLASHQLYI 448
PathogenicSAV:                              M                  
gnomAD_SAV:    VIFV  D  RR# S F   VML PVVH  MEH GQ# VAI  CY  HV
Conservation:  325454422324232532432353343442224337434153234323
STMI:          MMMMMMMMM    IIIIIIIIIIIIIIIIIIIII              
SS_PSIPRED:    HHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHH     
SS_SPIDER3:    HHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHH     
SS_PSSPRED:    HHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHH    
DO_DISOPRED3:                                                  
DO_SPOTD:                                                      
DO_IUPRED2A:                                                   
MOTIF:                      PAL