P49916  DNLI3_HUMAN

Gene name: LIG3   Description: DNA ligase 3

Length: 1009    GTS: 2.113e-06   GTS percentile: 0.693     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 11      gnomAD_SAV: 481      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSLAFKIFFPQTLRALSRKELCLFRKHHWRDVRQFSQWSETDLLHGHPLFLRRKPVLSFQGSHLRSRATYLVFLPGLHVGLCSGPCEMAEQRFCVDYAKR 100
gnomAD_SAV:     FST  VL R  VH P *E  #VV*  Y*H G H N          R   V#  #  PV# G    HT CF    # PLE FN S   T  # Y  C  H
Conservation:  7022220121120223021000111000110000110020000100000001101001000101110010001100010001200027557854557456
STMI:          TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT                                                          
SS_PSIPRED:      EEHHHH HHHHHHH               HHHH             EEEE                EEEEEE           HHH        HH  
SS_SPIDER3:      H HEEH HHHHHH       E          H             EEEEE                EEEEE      HH             H     
SS_PSSPRED:      HHHHHHHHHHHHHHH   HHH HHH                                          EEEEE            HHHHH         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDD                                    D    D           D D   DDDDD   DD     DDD   
DO_SPOTD:       D                                                                                                  
DO_IUPRED2A:                                                                                                       
ZN_FING:                                                                                                   FCVDYAKR

                       10        20        30        40        50        60        70        80        90     
AA:            GTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQHIADLSSKAAGTPKKKAVVQA 200
BenignSAV:                                                       Q                                                 
gnomAD_SAV:    D  D   #   F   I Q VQL   L A F V I     V  V   P Q QT #   KY A  Q   GP   K KR P YT      VV  T        
Conservation:  6454545656762993497776797997645667769673595766756794576675856799977456727743924563542382223835742443
SS_PSIPRED:                     EEEEEE                HHHHHHHHHH          HHHH  HHH  HHHHHHHHHHHHHHHHH             
SS_SPIDER3:               E    EEEEEE           H  H  HHHHHHHH      EEE   HHH        HHHHHHHHHHHHHHH               
SS_PSSPRED:                    EEEEEE                 HHHHHHHHHHHHH                   HHHHHHHHHHHHHHH              
DO_DISOPRED3:  DDD D DDDD                 DD                   D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                  DDDDDDDDDDDD       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                         D  D    D DD DDDDDDDD DDDDDDDDDD DD     DDDDDD
ZN_FING:       GTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQHIADLS               

                       10        20        30        40        50        60        70        80        90     
AA:            KLTTTGQVTSPVKGASFVTSTNPRKFSGFSAKPNNSGEAPSSPTPKRSLSSSKCDPRHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFH 300
BenignSAV:                            W                                                                            
gnomAD_SAV:    R    D* SY   DTL I   DAQ    S   RS   DTAW  SSN  P T  R  W      Q  Q   T   NIAT S  IE   E PQ  LT V   
Conservation:  4342442324614233222336668978865743331122212213135641266529796779689879537873579839976844793895398594
SS_PSIPRED:                                                                  HHHHHHHHHHHH    HHHHHHHHHHHHHH        
SS_SPIDER3:                                                                  HHHHHHHHHHHH    HHHHHHHHHHHHHH        
SS_PSSPRED:                                                                 HHHHHHHHHHHHHH   HHHHHHHHHHHHHHH       
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                              
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                           
DO_IUPRED2A:   DDDD        DDD            DDDDDDDDDDDDDDDDDDDDDDDDD                                                
REGION:                                                                                    PSYN                    
MODRES_P:               S     S          S              S                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            GDVYLTVKLLLPGVIKTVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDI 400
gnomAD_SAV:    SNM VI   P  RI       SG E L   IH   R   NL Q   *  M       S   R  LRG#      E A#    W FN    NK     R  
Conservation:  9946897978999779379987889969688847356374846895799999978569725347565488366468972392387377797798249515
SS_PSIPRED:    HHHHHHH HH   HHHH     HHHHHHHHHHHH   HHHHHHHHH   HHHHHHHHHHH             HHHHHHHHHHHHHH  HHHHHHHHHHH
SS_SPIDER3:     HHHHHHHHH    H HH    HHHHHHHHHHHH   HHHHHHHHH   HHHHHHHHHHH            EHHHHHHHHHHH     HHHHHHHHHHH
SS_PSSPRED:     HHHHHHHHH            HHHHHHHHHHHH   HHHHHHHHHH  HHHHHHHHHHHH            HHHHHHHHHHHHHH  HHHHHHHHHHH
DO_DISOPRED3:                                                          D DDDDDDDDD                                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                    D  
REGION:                         VYNLND                                                                TKED         

                       10        20        30        40        50        60        70        80        90     
AA:            ASRCTANDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKSVEYAMKKCP 500
gnomAD_SAV:     P  I S    #     RG  V #   R  G  E #  A I  LC   V M QF   TR#M   L  KQ   I DL      #V  K   FI   VR  S
Conservation:  5267969999867887988866456687799979898669989998927974979293553121492762937595868989988666977645766789
SS_PSIPRED:    HHH  HHHHHHHHHHHH         HHHHHHH HHHHHHHH    HHHHHHHHH   HHHH     HHH  EE EE      HHHH    HHHHHHH  
SS_SPIDER3:    H H  HHHHHHHHHHHHHH      HHHHHHHH HHHHHHHH    HHHHHHHH   HHHHH        HEEE          H      HHHHHHH  
SS_PSSPRED:    HHH   HHHHHHHHHHHHHH       HHHHHH HHHHHHHHH   HHHHHHHHHHHHHHHH          EEEE      HHHHHHHH HHHHHHH  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                            DDDDD DDDD DD DDD                          
REGION:                            KMNSGAK                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            NGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF 600
gnomAD_SAV:    # IV#   *N      R D     N  C  M IVL  M    N   #   E  TI    K   TYKQ     R ES  L    DLE   IY LD YS H 
Conservation:  6977677799999979974542937466676867667959986698499487397999788899953357999997997989999579597999999679
SS_PSIPRED:      EEEEEE    EEEEEEE  EEEEEE             HHHHHHHH     EEEEE EEEEEE     EE      HHH        EEEEEE EEEE
SS_SPIDER3:      EEEEEEE  EEEEEEEE  EEEEEE            HHHHHHHHH     EEEEE EEEEEE     EE   EEEHE E       EEEEEEEEEEE
SS_PSSPRED:       EEEEE    EEEEEE   EEEEEE       HHHHHHHHHHHHHH     EEEEEEEEEEEE             HHHHH      EEEEEEEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:            E      R              R                                                                        
METAL:                                                                    E                                        
ACT_SITE:             K                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            NDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKALDLADMITRVIQEGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYG 700
BenignSAV:                V                                                                                        
gnomAD_SAV:         INKL WVQW Y  AS   VA Q    *  Q       S V  WM   * V  M  GM S HKA  #    M TY   K  IPN V VA     C 
Conservation:  9548885767199757726685673444557865343553473547577567777777776257199999999979999999797999699959997779
SS_PSIPRED:      EE     HHHHHHHHHH   EE  EEEEEEEEEE  HHHHHHHHHHHHH    EEEEE            EEEE HHHH         EEEEEEEE  
SS_SPIDER3:      EE     HHHHHHHHHHH EE   EEEEEEEEEE  HHHHHHHHHHHHH    EEEEE     EE       EE HHHH          EEEEEEEEE
SS_PSSPRED:             HHHHHHHHHHH      EEEEEEEEE   HHHHHHHHHHHHHH   EEEEE             EEE HHH           EEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                  K          R   K                         
METAL:                                                               E                                             

                       10        20        30        40        50        60        70        80        90     
AA:            QGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNELDMVKISKDPSKIPSWLKVNKIYYPDFIVPDPKKAAVWEITGAEFSKSEAHTADGI 800
BenignSAV:                                                                        H                                
gnomAD_SAV:      N  S I        N   H C      V   AN M  S     G L   R  G  AI  M K L H  LVI  AE   #*  #RTA F   V K AR 
Conservation:  4967995665777995972435977767757757776929995795679979774979299675949499966459539769778687786696968486
SS_PSIPRED:            EEEEEEEEE    EEEEEEEE     HHHHHHHHHHH   EE          EE        EEEE     EEEEEEEEE EE       EE
SS_SPIDER3:            EEEEEEEEE    EEEEEEE      HHHHHHHHHH   EEEE         E         EEEE    EEEEEEEEEE       EE  E
SS_PSSPRED:           HHHHHHEE      EEEEEEEE     HHHHHHHHHHHHH EE         HHH        EEE      EEEEEE  EEE         E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFTVVAGDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGKLSNSNSKDGNMQTAKPS 900
BenignSAV:                                                                       H                   F          T  
gnomAD_SAV:     VQ     QV*     #                      I   #GE  I VSN  G  RRL    CS     S   I  #K     F R    #  VT  
Conservation:  8998966754657788568969359667756987435616353242131224645643423335242214332221121231311143333301101012
SS_PSIPRED:    EEE   EEEEE    HHH   HHHHHHHHHHHHHHH                                         HHHHHHHH               
SS_SPIDER3:    EEE  EEEEEEE   HHH   HHHHHHHHHH H                                               H  H                
SS_PSSPRED:    EEE   EEEE     HHH   HHHHHHHHHHHHHHH                                          HHHH                  
DO_DISOPRED3:                                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                 D DD        D            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            AMKVGEKLATKSSPVKVGEKRKAADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMTSATHVLGSRDKNPAAQQVSPEWIWACI 1000
BenignSAV:     T                                        Q                                           S              
gnomAD_SAV:    TVMM     A   SE A   W V A M     IS  V  R QFD# LAIS LCC  H  MS NRHVAE  Y I  M M V  E  SVT  AY Q*  T V
Conservation:  2141133333333314283434222111110328456856557566153243135564646558567243523388734321221215335731747345
SS_PSIPRED:                                      HHH    EEE       HHHHHHHHHH   EEEE       EEEEE         EE HHHHHHHH
SS_SPIDER3:      EE           EE              E     EE  EEE       HHHHHHHHEH   EE         EEEEE         E  HHHHHHHH
SS_PSSPRED:                                      HHH   EEEEE      HHHHHHHHHHH  EEE        EEEE          EE HHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                        
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDD                                                     DDDDDDDDD               
MODRES_P:                  S                                                                                       

                       1
AA:            RKRRLVAPC 1009
BenignSAV:       Q      
gnomAD_SAV:    Q W  IPL 
Conservation:  545633232
SS_PSIPRED:    HH       
SS_SPIDER3:    H        
SS_PSSPRED:    HH       
DO_DISOPRED3:           
DO_SPOTD:               
DO_IUPRED2A: