P49917  DNLI4_HUMAN

Gene name: LIG4   Description: DNA ligase 4

Length: 911    GTS: 2.532e-06   GTS percentile: 0.814     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 10      BenignSAV: 12      gnomAD_SAV: 467      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLP 100
BenignSAV:       V     I                                                    H                                      
gnomAD_SAV:      V K * I#GT LS VNW     Q  E# RHT E   LG Y VTC TL    R K   A  FS  E# V V *  K T       SV V  NV   SFL
Conservation:  8412201016531565179934895663370825925263285359928826665212131889868799469459999699899958799676579398
SS_PSIPRED:                   HHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHH   HHH  HHHHHHHHHH  HHHH        HHHHHHHHHHHH   
SS_SPIDER3:                   HHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHH  H      H    HHHHHHHHHHHH   
SS_PSSPRED:                   HHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHH  HHHHHHHH   HHHHHHHHHHHHH   
DO_DISOPRED3:  DDDDDDDDDD                                                                                          
DO_SPOTD:      DDDDDDDDDDD                                                                                         
DO_IUPRED2A:    DD D                                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            RDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQ 200
gnomAD_SAV:      RR         I A      *   I    L    R R      R*  NF     I  Y  S V R     K TP#       R RQI       VI  
Conservation:  5292780698889493323254999814779966397114819574599139647626832449354645684663566988999789985997688465
SS_PSIPRED:       HHHHHHHHH         HHHHHHHHHHHH           HHHHHHHHHHHHH   HHHHHHHHHHHHHHHHH  HHHHHHHHHHHHH       H
SS_SPIDER3:       HHHHHHH           HHHHHHHHHHHH          EHHHHHHHHHHHHH    HHHHHHHHHHHHHHHH  HHHHHHHHHHHHHH       
SS_PSSPRED:      HHHHHHHHHHH        HHHHHHHHHHHH           HHHHHHHHHHHHHH    HHHHHHHHHHHHHHH  HHHHHHHHHHHHHHH     H
DO_DISOPRED3:                                       DDD                                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            QTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD 300
PathogenicSAV:                                                                              H   LE                 
BenignSAV:                                   S                                                                     
gnomAD_SAV:      VL       P VRS I   *E FK  RGS    N T VA   T       VT V R   AI   CS      YD H K RI V #  #  # R    N
Conservation:  2467349919917766867983798359848254946698259669699995464423797552420976789899997969749329377798663842
SS_PSIPRED:    HHHHHHHHHHHHHHHHH   HHHHHHHH                           HHHHHHHH    EEEEEE    EEEEEEE  EEEEEE      HH
SS_SPIDER3:      HHHHH HHHHHHHHH   HHHHHHHHH     H H EEE       EE     HHHHHHH     EEEEEE    EEEEEE   EEEEE     EHHH
SS_PSSPRED:    HHHHHHHHHHHHHHHHH   HHHHHHHHH       EEEEEE HHH HHHHH   HHHHHHHH    EEEEEE    EEEEE    EEEEEE        
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                             E      R              R       
ACT_SITE:                                                                              K                           

                       10        20        30        40        50        60        70        80        90     
AA:            QFGASPTEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRI 400
PathogenicSAV:   R                                                                                                 
gnomAD_SAV:    R  V SA    #    D  RTVL  SV  V   TC  DI  Y  RR   H   #  Y       F  N  #   NN  PA    KC   NG  ASV D  
Conservation:  5991560296966678139203311999999999765063486899259979574678696897869979746449774629329241502453321874
SS_PSIPRED:    H          HHHHHHH      EEE   EEEEEE    EE        HHHHHH     EEEEEEEEE    EE     HHHHHHHHHHH      EE
SS_SPIDER3:    H         HHHHHHHH      EEEE  EEEEEE    EEEE      HHH HH    EEEEEEEEEEEE  EE    EHHHHHHHHHH  EEE  EE
SS_PSSPRED:              HHHHHHHHHHHH  EEEE  EEEEE     EE        HHHHHH     EEEEEEEEEEE  HHHHHH HHHHHHHHHHH      EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                       E                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            EIVQKTQAHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVF 500
PathogenicSAV:                                      H        C                     E                               
BenignSAV:                                                                 G                                       
gnomAD_SAV:     VAR I    ES  TY   DVTG      L E   C  EAVR D AC Q  S  I R V K  VSV        PQ  I F       K LLSS  A MS
Conservation:  4371511413235965679799736699767939273979699976937777775436476774556999697929576588985755825126359439
SS_PSIPRED:    EEEEEEEE  HHHHHHHHHHHHH                        EEE HHHH     EEEEEEEE             EEEEEEE          EE
SS_SPIDER3:    EEEEEEEE  HHHHHHHHHHHHH     EE       E         EE  HHHH     EEEEEEEE           EEEEEEEEE          EE
SS_PSSPRED:    EEEEEEE   HHHHHHHHHHHHHH                       EEE HHHHHHH   EEEEEE               EEEEEE           E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                    DD 
BINDING:                                      K          R     K                                                   
METAL:                                   E                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            HTLSRVGSGCTMKELYDLGLKLAKYWKPFHRKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE 600
PathogenicSAV:                                                          P                                          
BenignSAV:                                           F                                                            K
gnomAD_SAV:    # F C E   SVR     A   G    # PS  SLN  F     S IC#K       R   G  ARGGT    R SH SQ  TMGHN   R   N NNPK
Conservation:  6746979997986994598589524952727436913648639797577692397759779697719369672569999997579779395374742252
SS_PSIPRED:    EEEEEE     HHHHHHHHHHHHHH            EE       EEE     EEEEEEEEE EE       EEEE  EEEEEE    HHH   HHHHH
SS_SPIDER3:    EEEEE      HHHHHHHHHHH    E         HHE       EEE     EEEEEEEEEEEE    E  EEEE  EEEEEE    HHH   HHHHH
SS_PSSPRED:    EEEEEE     HHHHHHHHHHHHHH                     EEE     EEEEEEEEEEE         EE    EEEE     HHH   HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            QLRGKASGKLASKHLYIGGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCV 700
BenignSAV:                                   T                          V                                          
gnomAD_SAV:      W E   QITCN  CV SGH    E QR T  VR  T VTG#  TAK IHI #M SV *  D       NR    EVQ *T K S  TI  S  G *  
Conservation:  2652563989677940231133723874712371772335444373778626164454946589974591003381288526633892689986379896
SS_PSIPRED:    HHHHHHHHHHHH           HHH             HHHHH                  EEEE        HHHHHHHHHH   EEEE      EEE
SS_SPIDER3:    HHHH                                   EHHH                   EEEE        HHHHHHHHHH   EEE       EEE
SS_PSSPRED:    HHHHHHHHHHHHH          HHH           EE                       EEEE        HHHHHHHHHHH  EEEE      EEE
DO_DISOPRED3:         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                 
DO_SPOTD:            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                               
DO_IUPRED2A:                       DDDDDDDDDD                                              D                       

                       10        20        30        40        50        60        70        80        90     
AA:            IAGSENIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLE 800
PathogenicSAV:                                                                          P                          
BenignSAV:                                                                                                     S   
gnomAD_SAV:    TG PK F  TKV   D    L  E   K   NEN  L   H V LT LP    S H C  #S    TEI  Y V   #     A KP       PVSA G
Conservation:  6762284997955246259584419674942130358969248685563932497248906899724434003855582452000000100000133159
SS_PSIPRED:    EE    HHHHHHHH     EE HHHHHHHHHH        HHEEE  HHHHHHHHHHHHHH         HHHHHHHHH         HHHHHHHHHHHH
SS_SPIDER3:    EE      HHHHHH    EEE HHHHHHHHH        HHEEEE  HHHHHHHHHHHHH          HHHHHHHHH         HHHHHHHHHHHH
SS_PSSPRED:    EE    HHHHHHHHH   EEE HHHHHHHHHH         EEEE  HHHHHHHHHHHHH          HHHHHHHHH         HHHHHHHHHHHH
DO_DISOPRED3:                                                                                 DDDDDDDDDDDDDDDDDDD  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            YRYSWDCSPLSMFRRHTVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKESWVTDSIDK 900
PathogenicSAV:                                                              Y                                      
BenignSAV:                                            V                T                                           
gnomAD_SAV:    DW   GWPAFGI *C AICF L#V M YR  N   I   V D   #  EV   Y  T E  Y   R G  HLG    CKK#S  TYE#   I# A *V Q
Conservation:  1452321112349911138360322442303120141412148365659725210615468666321311330147129513259658723095338511
SS_PSIPRED:    HH        HH    EEEEE HHH           HHHHHHHHHHH   EEEE      EEEEE      HHHHHHHHHH    EEEE HHHHHHHHH 
SS_SPIDER3:    HH         H   EEEEEE HH         H HHHHHHHHHHHH   EEEE     EEEEEE   HHHHHHHHHHHHH    EEEEEH HHHHHHH 
SS_PSSPRED:    HHH            EEEEEE          HHHHHHHHHHHHHHHHH  EEE        EEEE     HHHHHHHHHHHHH       HHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10 
AA:            CELQEENQYLI 911
gnomAD_SAV:    #  EK      
Conservation:  30323500843
SS_PSIPRED:         HHH   
SS_SPIDER3:         HHH   
SS_PSSPRED:               
DO_DISOPRED3:             
DO_SPOTD:                 
DO_IUPRED2A: