P50458  LHX2_HUMAN

Gene name: LHX2   Description: LIM/homeobox protein Lhx2

Length: 406    GTS: 4.765e-07   GTS percentile: 0.038     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 144      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLFHSLSGPEVHGVIDEMDRRAKSEAPAISSAIDRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSI 100
gnomAD_SAV:                E    TNL     VA      H S    A#R L#  GTT   S   R                   R  Q                  
Conservation:  5475532424333213223551512212113221123312121212142113644544253642442523535535565544635274443335634533
SS_PSIPRED:                                                                   EEEE     EEHHH               EEEE  EE
SS_SPIDER3:                                                       E      EEEEEEEEEE     E HHEEEEE E       EEEEE  EE
SS_PSSPRED:                                                                  HHHHH      HHHHH  H H         EEE     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                     
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                   
DO_IUPRED2A:                   DD          DDD DD     D                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            YCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFEALLQGEYPAHFNHADVAAAAAAAAAAKSAG 200
gnomAD_SAV:       G  N L      G              P  F    S  M     NT       # E N    C  L    L     Y K D#L   S#EVT#   S 
Conservation:  4774543575634454577674373636734544637747747457374939996797442396632553031321411033132222222221013122
SS_PSIPRED:    E    HHH               HHHHEEE   EEE                    EEE  EEE HHHHHHHH          HHHHHHHHHHHHHHH  
SS_SPIDER3:    EEE  H H    HHHH        HHEEEEE   EEEE  EEE     E     EEEEE  EEEEHHHHHHHH      H  HH HHHHHHHHHHH    
SS_PSSPRED:    E    HHH   HHHHHHH     HHHHHHHH   EEE    EE            EEE    EEHHHHHHHHH           HHHHHHHHHHHHH   
DO_DISOPRED3:                                                                              DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                   DDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LGAAGANPLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLA 300
gnomAD_SAV:     SV  SDL S LC H M           TIL A    T  STG  S K# SQLVNC  Q R    I                   T           H  
Conservation:  2222222213512225133144453343345102051013432235355432234333332424535759557575775744447335757777755593
SS_PSIPRED:                                     HHHHHHHHHHHH                         EE  HHHHHHHHHHHHH     HHHHHHHH
SS_SPIDER3:                                        HHHHHHH                               HHHHHHHHHHH       HHHHHHHH
SS_PSSPRED:                                      HHHHHHHHHHH                           HHHHHHHHHHHHHHH     HHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                               
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                            
DO_IUPRED2A:                      DDDDDDDDDDDDDDDD             D DDDDDDDDDDDDDDDDDDDDDDDDD      D DDD  D  DDDDDDDDD
DNA_BIND:                                                                       TKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLA

                       10        20        30        40        50        60        70        80        90     
AA:            QKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKSTDAALQTGTPSGPASELSNASLSPSSTPTTLTDLTSPTLPTVTSVLTSVPGNLEGHEPHSPSQT 400
gnomAD_SAV:       D            T   L     Q  T AM  L  VV H  MSLVL  DF DTL       #IRKG #     A # I S   RKR    T    RA
Conservation:  4557937544366666457644542535542326312432221213314214224124351133143433324122222233324321230133123212
SS_PSIPRED:    HHH   HHHHHHHHHHHHHHHHHHHHH                                                                       HH
SS_SPIDER3:    HHH     EEEEE      HHHHHHHHH          HH                           H                                
SS_PSSPRED:    HHH     EEEEEEHHHHHHHHHHHHH                                                                         
DO_DISOPRED3:                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DD                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDD
DNA_BIND:      QKTGLTKRVLQVWFQNARAKFRRNL                                                                           
MOTIF:               KRVLQVWFQNARAKFRR                                                                             

                     
AA:            TLTNLF 406
gnomAD_SAV:    A  S  
Conservation:  332215
SS_PSIPRED:    HHH   
SS_SPIDER3:          
SS_PSSPRED:          
DO_DISOPRED3:  DDDDDD
DO_SPOTD:      DDDDDD
DO_IUPRED2A:   DDDDDD