P51788  CLCN2_HUMAN

Gene name: CLCN2   Description: Chloride channel protein 2

Length: 898    GTS: 2.314e-06   GTS percentile: 0.756     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 13      BenignSAV: 16      gnomAD_SAV: 504      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAAAAAEEGMEPRALQYEQTLMYGRYTQDLGAFAKEEAARIRLGGPEPWKGPPSSRAAPELLEYGRSRCARCRVCSVRCHKFLVSRVGEDWIFLVLLGLL 100
PathogenicSAV:                      K D N                                                                       R  
BenignSAV:                                                    R                   H                                
gnomAD_SAV:     PT  V   TA QV   Q   T  Q I  V D  R  T W H A  #LG ASL FW  A      WGHYTQ H#   S Y L  Y I  H         F
Conservation:  1111111000000110010012231213113100331111110110001110100000001000111122332132121312332334367546346843
STMI:                                                                                                 MMMMMMMMMMMMM
SS_PSIPRED:      HHHHH     HHH     HHHEE      HHHHHHHHHHH                HHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:                            EEH    HHHHHHHHHH                 HHHHHH     HHHHHHHHHHHHHHHHHH  HHHHHHHHHHH
SS_PSSPRED:      HHHHHH   HHHH  HHHHH    HHHHHHHHHHHHHHHHH               HHHHHHH  HHHHHHHHHHHHHHHHHHH   HHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDD D                   DDDDD                                                     
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDD       D DDDDDDDDDDDDDDDDDDDDDDDDDDD                                          
DO_IUPRED2A:                                                                                                       
MODRES_P:                         T                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            MALVSWVMDYAIAACLQAQQWMSRGLNTSILLQYLAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKEYLTLKTFIAKVIGLTCALGSGM 200
PathogenicSAV:                                                                        Q                            
BenignSAV:                                                                                                       A 
gnomAD_SAV:    TS   *GV      G       FQ     V P      A         TV IH V  HV S  FL   #V*W     K F    V   FT  #WT  GE 
Conservation:  4553672573243132243482401411432576457624542763775254444554559655583565556535444553445245445644375243
STMI:          MMMMMMMMMMMMMMMMMMMMM        MMMMMMMMMMMMMMMMMMMMMMMMMM        IIIIIIII        MMMMMMMMMMMMMMMMMMM  
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHH     HHH  HHHHHHHHHHHHHHHH   
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH     EEEEE  EE HHH  HHHHHHHHHHHHHHHH   
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHH HHHH     HHHHHHH    HHH  HHHHHHHHHHHHHHH    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:                                                                     GSGIP                                   
BINDING:                                                                    S                                      

                       10        20        30        40        50        60        70        80        90     
AA:            PLGKEGPFVHIASMCAALLSKFLSLFGGIYENESRNTEMLAAACAVGVGCCFAAPIGGVLFSIEVTSTFFAVRNYWRGFFAATFSAFIFRVLAVWNRDEE 300
PathogenicSAV:                                   Q                                                                 
BenignSAV:                T                                                                                        
gnomAD_SAV:    LV   R V  MT       G L  F #SFH  A W   #P GTY M      V SV  I   MK    V  AQKC     T        W V  G W   
Conservation:  6452544343343341214431322426121211221425235434442343245457253355231336344466574443333443463436221342
STMI:              MMMMMMMMMMMMMMMMMMM               IIIIIIIIIIIII   IIIIIIIII           MMMMMMMMMMMMMMMMMMMMM     
SS_PSIPRED:           HHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHH HHH           HHHHH     HH   HHHHHHHHHHHHHHHHHH      
SS_SPIDER3:           HHHHHHHHHHHHHHHHHH       HHH  HHHHHHHH EEEEEE      EE  HHHHHHH     HHHHHHHHHHHHHHHHHHH       
SS_PSSPRED:            HHHHHHHHHHHHHHHHHH      HHHHHHHHHHHH   EEE         EEEEHHH      HHHHHHHHHHHHHHHHHHHHHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:           GKEGP                                                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            TITALFKTRFRLDFPFDLQELPAFAVIGIASGFGGALFVYLNRKIVQVMRKQKTINRFLMRKRLLFPALVTLLISTLTFPPGFGQFMAGQLSQKETLVTL 400
PathogenicSAV:                                       L                                                             
BenignSAV:                                  V                                                  A                   
gnomAD_SAV:      I#V   G WFN L   LD    V T VVT LS    LC KW V  M   ER  SHL  GRC   L     V  #MS#LR   * V   VL  KMPIN 
Conservation:  3334322424223344484546453334525954874765446353324832323416534336466436643456258839486665448453435257
STMI:                              MMMMMMMMMMMMMMMMMMMMMMMMMMMMM        MMMMMMMMMMMMMMMMMMMM                       
SS_PSIPRED:    EEEEEEEEEE       HHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHH  HHHHHHHH    HHHHHHHHHHHHHH   HHHHHHHH    HHHHHHH
SS_SPIDER3:    EEEEEEEEE E      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHH HHHHHHHHHHHHHHHH    H HHH     HHHHHHHH
SS_PSSPRED:    EEEEEEEEEE       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHH   HHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FDNRTWVRQGLVEELEPPSTSQAWNPPRANVFLTLVIFILMKFWMSALATTIPVPCGAFMPVFVIGAAFGRLVGESMAAWFPDGIHTDSSTYRIVPGGYA 500
PathogenicSAV:                                                                  E    H                            V
BenignSAV:                                            F                                                            
gnomAD_SAV:      SQMCIH S A GI #L     C L PT I    #N  F#   L   T   S SS V     FV    RC L   I  S     YM CG  WTMSEV #
Conservation:  6852883311111120014041481442356545624845466354444264948474548456463256455442451136353113213424384454
STMI:                                      MMMMMMMMMMMMMMMMMMMMM       MMMMMMMMMMMMMMMMMMMMMMMM                IIII
SS_PSIPRED:    HH   HHH            HHH     HHHHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHH                 HHH
SS_SPIDER3:    HH    HH                     HHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHH    EEE     EE     H
SS_PSSPRED:    HH                           HHHHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHH    EE            HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                    D                                                                                  
MOTIF:                                                                 GAFMP                                       
BINDING:                                                                 F                                         

                       10        20        30        40        50        60        70        80        90     
AA:            VVGAAALAGAVTHTVSTAVIVFELTGQIAHILPVMIAVILANAVAQSLQPSLYDSIIRIKKLPYLPELGWGRHQQYRVRVEDIMVRDVPHVALSCTFRDL 600
PathogenicSAV:   R                                                                         Q                       
gnomAD_SAV:    L R  VP  S  Y LCA  MM K  DH   V  LIFTI   DT P     T  EN  *L E       S* C    Q HG   I W   #       QY 
Conservation:  3365433365546435545433864843444563444546562556375663664383455696884833421435242867683334144341335356
STMI:          IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMMMMMMMMMMMMMMMMMM                                                    
SS_PSIPRED:    HHHHHHHHHHHH EEEHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHH   HHHHHHHH                    HHHH      EEE    HHHH
SS_SPIDER3:    HHHHHHH   EE EEEEEEEEEEH   HHHHHHHHHHHHHHHHHHHH    HHHHHHHH                 EEEHHHH     EEEE    HHHH
SS_PSSPRED:    HHHHHHHHHHHHEHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHH   HHHHHHHHHH                  EHHH      EEEE    HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                           Y                                               

                       10        20        30        40        50        60        70        80        90     
AA:            RLALHRTKGRMLALVESPESMILLGSIERSQVVALLGAQLSPARRRQHMQERRATQTSPLSDQEGPPTPEASVCFQVNTEDSAFPAARGETHKPLKPALK 700
BenignSAV:                                                C Q              T      S                   #            
gnomAD_SAV:    H  V G ND*    A#Y # V    A KH  M  #F T*    HWW  TE#GT   AF  T  K SLNL   F L M PK   LSVD#RK R #  S   
Conservation:  1036012224246564525454869445315422320024411572000111110001201011100000111262211221110100010125222111
SS_PSIPRED:    HHHHHH      EEEE     EEEEEEEHHHHHHHHHH   HHHHHHHHHHHHHH                   EEE                       
SS_SPIDER3:    HHHHH        EEE     EEEEEEEHHHHHHHHH    HHHHHHHHHHHHH                      E                       
SS_PSSPRED:    HHHHHH    EEEEEE     EEEEEE HHHHHHHHHH   HHHHHHHHHHHHHH                                             
DO_DISOPRED3:                                             DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                             DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      DDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            RGPSVTRNLGESPTGSAESAGIALRSLFCGSPPPEAASEKLESCEKRKLKRVRISLASDADLEGEMSPEEILEWEEQQLDEPVNFSDCKIDPAPFQLVER 800
BenignSAV:                      D      W                     H                                                     
gnomAD_SAV:    WR  IS   R GL#E TDL   TFWR L    AS   LG   #R NH   H #    N V P SGVR   V          S T N WR  TT    G Q
Conservation:  1111000011111111111110230121401111111111001000111011111112102302042124302642043320313202254333443332
SS_PSIPRED:                           HHHH       HHHHHHHHHH        EEE            HHHHHHHHHH           EE          
SS_SPIDER3:                    HHH    HHH        HHHHHHHHHHHHHH                   HHHHHHHHH      E     EE      E   
SS_PSSPRED:                       H HHHHHH        HHHHHHHHHHH    HHHHH                 HHHHH                  EE   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                   
DO_IUPRED2A:   DDDDDDDDDDDDDDDDD               D DDDDDDDDD                DD D DDDDDDDDDDDDD      DD               
MODRES_P:                 S                                             S                                          

                       10        20        30        40        50        60        70        80        90     
AA:            TSLHKTHTIFSLLGVDHAYVTSIGRLIGIVTLKELRKAIEGSVTAQGVKVRPPLASFRDSATSSSDTETTEVHALWGPHSRHGLPREGSPSDSDDKCQ 898
PathogenicSAV:                                                                 R                                 
gnomAD_SAV:     T  E   V       R    I D  T  # V   WN VK C R      Q H    Q T      P N Q R V E   HQ   W*  R N NNT  
Conservation:  32323241323243422333521733243334244334427313115234353312321202221000110111110100000130100111111111
SS_PSIPRED:      HHHHHHHHHHH   EEEE     EEEEEEHHHHHHHHH                               HHH                        
SS_SPIDER3:      HHHHHHHHHH    EEEEE   EEEEEEEHHHHHHHH         E                    HHHH                         
SS_PSSPRED:      HHHHHHHHHHH   EEEEE   EEEEEE HHHHHHHHH                                                          
DO_DISOPRED3:                                                  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                 DDDDD    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                             D      D   DDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD