P52701  MSH6_HUMAN

Gene name: MSH6   Description: DNA mismatch repair protein Msh6

Length: 1360    GTS: 2.533e-06   GTS percentile: 0.814     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 31      BenignSAV: 59      gnomAD_SAV: 923      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSRQSTLYSFFPKSPALSDANKASARASREGGRAAAAPGASPSPGGDAAWSEAGPGPRPLARSASPPKAKNLNGGLRRSVAPAAPTSCDFSPGDLVWAKM 100
PathogenicSAV: I                                                                                     T             
BenignSAV:                 T      V    V             E     CE   R   A     VT   L               T                   
gnomAD_SAV:    IL *TP HGLL#RFSV T #D P SW LH  D#VVSVSA# S#  RV VRR  A  A S V CPL           W          Y#  L    S   
Conservation:  7235345225514321112223221213212221122102121222124111122221212101111112112212111000002112162593598686
SS_PSIPRED:          HHH                                                           HH                        EEEHH 
SS_SPIDER3:           H H                                                                                    EEE   
SS_PSSPRED:                                                                                                 EEEEE  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD               
DO_IUPRED2A:                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DD                
MODRES_P:                   S                          S S                                   S           S         
MODRES_A:                                                                           K                              

                       10        20        30        40        50        60        70        80        90     
AA:            EGYPWWPCLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRADEALNKDKIKRLELAVCDEPS 200
BenignSAV:                                                I                          Q   V     A                   
gnomAD_SAV:      F        S     KLTHKE E  C  #            IN    RH   Q*M V  RSPC  GN G   VV L  KP   Y  M  A    H # 
Conservation:  5969999776537923331383273226499798852838886325456282992114533992855156463575238713403230397244481579
SS_PSIPRED:            EEE      EEEE      EEEEEE           HHH         HH           HHHHHHHHHHHHHH   HHHHHH        
SS_SPIDER3:          EEEEE       EEE    EEEEEEEE           H HE  E                  HHHHHHHHHHHHH    HHHHH         
SS_PSSPRED:            EE         E       EEEEE            HHH                      HHHHHHHHHHHHHH   HHHHHHH       
DO_DISOPRED3:                             D               DDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                           DDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                 D             DDDD    DDD  DDDDDDD  DD DD    DDDDD            DDDDDDDD
MODRES_P:                                          S                                                              S

                       10        20        30        40        50        60        70        80        90     
AA:            EPEEEEEMEVGTTYVTDKSEEDNEIESEEEVQPKTQGSRRSSRQIKKRRVISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKR 300
BenignSAV:                        DD                                                                   D     R     
gnomAD_SAV:         KK *    SGIG#NGK S  #NK    R   ## *R H L Q#TAVA             RL S   #NT D   V R I   VP IS R V#NW
Conservation:  6255665353102012322413201203121002021230112429767732565752325637548612315456502231241132301323632194
SS_PSIPRED:      HHHHH                    HH                   EEE                          HH                     
SS_SPIDER3:      H HHH                 H                       E                                                   
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                        S       S                        S S S    S       T    SS   SS                    

                       10        20        30        40        50        60        70        80        90     
AA:            KRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPE 400
PathogenicSAV:                                                                   R  S                           E  
BenignSAV:        A                   R   G           SA                                                    A V    
gnomAD_SAV:     T#E    YP   NCK  MT T#Q  AR P A  HS  PS#VL KC FEV I VSA#ETGC## R   I      ATK  KY M  HDSN EGCIVCL  
Conservation:  5600102120111010110211133111321336238237344332734321122230011221969766787423677902863325336732765696
SS_PSIPRED:                          HH       HHHHHHH        HHH                 HH  HHH                          H
SS_SPIDER3:                                    HH H HH                               H                         E  H
SS_PSSPRED:                                                                         HHH                           H
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD            D D DDDD                
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D              DDDDDDDDDDDDDDDD         
MODRES_P:              S                                                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            DFLNSCTPGMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMA 500
PathogenicSAV:                  P                              P                              E P                  
BenignSAV:       I                                                               DH                           Y    
gnomAD_SAV:       SCG L   R     AEI  ILV  E   C         T    MRP   RAT P CR #     HC E     CCRE Q   IKA  TV #*Y R T
Conservation:  6644329994869955974469376779999999877699667857658479783989999996685976539866569649688588969895977332
SS_PSIPRED:    HHHHH  HHHHHHHHHHHH   EEEEEE   HHHHHHHHHHHHHHHH EEE           HHHHHHHHHHHHH    EEEEE    HHHHHHHHHHH 
SS_SPIDER3:    HHHHH  HHHHHHHHHHHH    EEEEEE  HHHH HHHHHHHHHHH  EEEE    EE E HHHHHHHHHHHHH   EEEEEE    HHHHHHHHHHH 
SS_PSSPRED:    HHHHH   HHHHHHHHHHH   EEEEEEE  EEHHHHHHHHHHHHHH  EE           HHHHHHHHHHHHHH  EEEEEEE   HHHHHHHHHH  
DO_DISOPRED3:                                                                                        DDDDDDDDDDDDDD
DO_SPOTD:                                                                                                      DDDD
DO_IUPRED2A:                                                                                                       
MODRES_P:                                                                                             T            

                       10        20        30        40        50        60        70        80        90     
AA:            HISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLLSLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN 600
PathogenicSAV:                                         R                        R                                  
BenignSAV:       C     A                            S                 F                       L    P               
gnomAD_SAV:    YTC    MA G V     R IRP T   V   D CNE H#G   EG  YA QAC C    D SLVANV VRH T  HYRL LT   E  R  EI I  RS
Conservation:  5377487983986997677996966767633551255698549941242373052785796967693825999298966996998576539576659775
SS_PSIPRED:            EEEEEEEEE       HHH          EEEEEEEE         EEEEEEEE    EEEEEEE    HHHHHHHHHHH    EEEEE   
SS_SPIDER3:           EEEEEEEEEEE      HHH          EEEEEEEE E     EEEEEEEEEE     EEEEEE     HHHHHHHHH     EEEEE   
SS_PSSPRED:           EEEEE  EEE                 HHHHEEEEEE          EEEEEEEE     EEEEEE    HHHHHHHHHHH    EEEE    
DO_DISOPRED3:  DDDD                                                                                                
DO_SPOTD:      D                                                                                                   
DO_IUPRED2A:                                                                                                       
MODRES_A:         K                                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            LSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQEL 700
PathogenicSAV:                                                                                      D              
BenignSAV:                           A                                                     T                       
gnomAD_SAV:        SE V#N    SCIRDS  ADF     CQ     #K    S*R GY V A#  R  Q K  KFH T   A KR QSV  VV   F   #     E# 
Conservation:  6826523668525334489691465869561688627386299030011201008915650644339465869463358486879566698679569387
SS_PSIPRED:      HHHHHHHHHH    HH           HHHHHHHHHHHHHHHHH        HHHHHHH                HHHHHHHHHHHHHHHH   HHHH
SS_SPIDER3:      HHHHHHHHHH                 HHHHHHHHH HHHHHHH         HHHHH                 HHHHHHHHHHHHHHHH    HHH
SS_PSSPRED:      HHHHHHHHHHH  HHHH          HHHHHHHHHHHHHHHHHH        HHHHHH               HHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                        DDDDDDDDDDDDDDDDD                             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                        D                              

                       10        20        30        40        50        60        70        80        90     
AA:            LSMANFEEYIPLDSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLDAIEDLMV 800
PathogenicSAV:      S                                      N                     I    W                           A
BenignSAV:                                                         F                                              L
gnomAD_SAV:      VG     #  NCEA  #IGYAGMY#T C #V   V  * K  V    K S P E   #G GS #SH   Q VQ  #RV  S  H    #   T  V L
Conservation:  7944585593969321110013123913315669896679399967283348528969564592928499799976957499845048259869456831
SS_PSIPRED:    HH   EEEE                      EEEE HHHHHHEEEEE          HHHHHH       HHHHHHHHH     HHHHHHHHHHHHHHH 
SS_SPIDER3:         EEEEE                     EEEE HHHHH  EEE       E   HHHHHHH      HHHHHHHHH H   HHHHHHHHHHHHHHH 
SS_PSSPRED:    HHH   EE                 H HHHHHEE HHHHHHHHHHE           HHHHHH       HHHHHHHHHHH   HHHHHHHHHHHHHHH 
DO_DISOPRED3:                DDDDDDDDDD                                                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                            D                                          

                       10        20        30        40        50        60        70        80        90     
AA:            VPDKISEVVELLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKNPEG 900
BenignSAV:                                                                                  A  S    V              
gnomAD_SAV:      G VFQ A   QE#     V G  DD#  #  #E QL   P    KI CGT M  N  F    LTIT## T  T  ATES TC  VNPFV   RIS D 
Conservation:  3424337427287669968899479955956852339854787588733888789489866969853314521132212114291383633313211215
SS_PSIPRED:     HHHHHHHHHHH     HHHHHHHHHH            HHHHHH         HHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHH       
SS_SPIDER3:      HHHHHHHHHH     HHHHHHHHH              HHHHHH        HHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHH      
SS_PSSPRED:     HHHHHHHHHHHH   HHHHHHHHHH                            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      
DO_DISOPRED3:                                      DD  DDD                                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                         D   DD                                                        
MODRES_P:                                   S                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            RFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTK 1000
PathogenicSAV:                                                                     C                               
BenignSAV:                          Q                                                                              
gnomAD_SAV:    H SHM A F L GID ERD V* S FT#  T    E   S DYV      FPK V   H#T#   S GFC   G    Q   #HV IHS A# F   T#N
Conservation:  3996831992794478682398379674972999377929513622252163188439744562744268837799796976663214269378367977
SS_PSIPRED:        HHHHHHHHHHH  HHHHHHH          HHHHHHHHHHHHHHHHHHHHHHHHHHHH    EEEEE    EEEEEEE           EEEE   
SS_SPIDER3:        HHHHHHHHHHH  HHHHHH   E       HHHHHHHHHHHHHHHHHHHHHHHHHHHH    EEEEE   EEEEEEEE      H    HEEE   
SS_PSSPRED:       HHHHHHHHHHH   HHHHHH   EE      HHHHHHHHHHHHHHHHHHHHHHHHHHHH    EEEEE  EEEEEEE           HHHHH    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                              D        
MODRES_P:                                        S                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            KGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILLPEDTPPFLELKGSRHPCIT 1100
PathogenicSAV:                                                       P  H   YR            C                        
BenignSAV:                                              N           F         T        S             R             
gnomAD_SAV:        # C II   RF   V G  # GI F   R#LQLC  G      E  IK*FTLS      VKC QRD VS# H LVR SQ S#HC  V RLCR   M
Conservation:  9947985843583363253439769627666997669479655324953686946669684564279435583548823344221147528137799974
SS_PSIPRED:        EE  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH         EEE       EEEEE      HH
SS_SPIDER3:       EE   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHH     E   EEE       EEEEE     E H
SS_PSSPRED:         E  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH        EEE       EEEEE     HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_P:               T                                                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            KTFFGDDFIPNDILIGCEEEEQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI 1200
PathogenicSAV:                                                   D                                         K       
gnomAD_SAV:    E# LRVE  # NM T #K  #      CGM LNA    D  MFL  T# FG TGH#A *IA V     A   M IGVDD*N M# DG AL# Q TQ#  M
Conservation:  7669997999976278332111111061949999999999999699599446699596659961635665777999999795776999997997777667
SS_PSIPRED:                EEE   HHHHH    EEEEEE      HHHHHHHHHHHHHHHHH     HHH EE               HH     HHHHHHHHHHH
SS_SPIDER3:    H      E E EEEE   HHH H    EEEEEE      HHHHHHHHHHHHHHHH   E    H  E    EEE   E           HHHHHHHHHHH
SS_PSSPRED:    H           E              EEEEEE      HHHHHHHHHHHHHHHHH         EE EEEEEE     HHHH       HHHHHHHHHH
DO_DISOPRED3:                                                                                      DDDD   DDD      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                                        GPNMGGKS                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            LMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGF 1300
PathogenicSAV:           P    R                         H                                                          
BenignSAV:                 V                  L Q                         I                                        
gnomAD_SAV:    F#N  G#  L M   V S T V  M L HGA T V DSV  #A   AY R  ED#S E IV CV YTVRV  K Y  TNR##VM P      S LE    
Conservation:  7276916979969999777777676677377647754273966697777677755532204747777677776634969795979999941769769999
SS_PSIPRED:    HHH     EEE          HHHHHHHHHHHHHHHHH    EEEE   HHHHHHHHH    EEEEEEEEEE         EEEEEEEEE       HHH
SS_SPIDER3:    HHH     HEEEE        H HHHHHHHHHHHHHHH    EEEE   HHHHHHHH      EEEEEEEEE         EEEEEEEE        HHH
SS_PSSPRED:    HHHHHHHHEEEEE         HHHHHHHHHHHHHHHHH H EEEE      HHHHHH    EEEEEEEEEE         EEEEEEEEE       HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60
AA:            NAARLANLPEEVIQKGHRKAREFEKMNQSLRLFREVCLASERSTVDAEAVHKLLTLIKEL 1360
PathogenicSAV:                                  Q                          
BenignSAV:        K                G       L                               
gnomAD_SAV:      GK  D  K# VENRD   GV # IS L##  WDI  G G#* IVP  LR W  F N  
Conservation:  699779279747771973763579314143537725412352110210140232111012
SS_PSIPRED:    HHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHH 
SS_SPIDER3:    HHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHH  
SS_PSSPRED:    HHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHH 
DO_DISOPRED3:                          DDDDDDDDDDDDDDDDDDDDDDD             
DO_SPOTD:                                                                  
DO_IUPRED2A:                     D