P54278  PMS2_HUMAN

Gene name: PMS2   Description: Mismatch repair endonuclease PMS2

Length: 862    GTS: 2.661e-06   GTS percentile: 0.844     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 15      BenignSAV: 33      gnomAD_SAV: 523      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MERAESSSTEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQ 100
PathogenicSAV: #                                           T#                                                      
BenignSAV:          T           V Q               R                       E                                       R
gnomAD_SAV:    V#QVQTWGA L  D ESV GN# R   PAR   NVR V N*    NVN ST STVVMF NCR E#TK     Y  QA  #*S   #R IC VEV SN  P
Conservation:  2222011111223345565325585486666574745797775776466655256668663934466858891984418636657764767556949943
SS_PSIPRED:                   EE  HHHHHHHH    HH HHHHHHHHHHHHH     EEEEEEEE    EEEEEE      HHHHHHHHHH        HHHH  
SS_SPIDER3:                   EE  HHHHHHHH   EE  HHHHHHHHHHH       EEEEEEE    EEEEEE       HHHHHHHHHHH          HHH
SS_PSSPRED:                       HHHHHHHH  EEEEHHHHHHHHHHHHH      EEEEEEEE    EEEEEE      HHHHHHHHHHH HHH   HHHH  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDD                                                                                 
DO_SPOTD:      DDDDDDDDDDDD                                                                                        
DO_IUPRED2A:   DDDDDDDDDDDDDDD                                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            VETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRV 200
PathogenicSAV:       W       G                                                                                     
gnomAD_SAV:    A     QR S R F T NY  L    TLV    QVI    A       S##RG  A IL     IP MH    #  SN   T I R    C#    DVCI
Conservation:  6467767976754665532426296814316957936654834243362794385552444883378696886879465452433324243655438795
SS_PSIPRED:     EE    HHHHHHHHHH EEEEEEE     EEEEEEE     EE  EEE     EEEEEE      HHHHHHHHHHHHHHHHHHHHHHHHHHHH    EE
SS_SPIDER3:      E    HHHHHHHH H EEEEEEEE    EEEEEEE     EE EEEE      EEEHHHH      HHHHHHH HHHHHHHHHHHHHHHH H    EE
SS_PSSPRED:           HHHHHHHHHH  EEEEEE       EEEEE     EE           EEEEEE      HHHHHHHHHHHHHHHHHHHHHHHHHHH    EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                D DDD                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            SCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPA 300
BenignSAV:                                                                                 K                       
gnomAD_SAV:      S#P E ARQ  GLWIDEI NTN S SP   *    R V   HMT  #PLW  CS   F TVRS       V PRM  G S# AG  #   DQ#SS R 
Conservation:  5859837365622644446314376586466736965454482634834243554541022231125154956614357489654567656662585851
SS_PSIPRED:    EEEEE        EEEE     HHHHHHHHH HHHHHH EE         HHHHH     HH    EEEEEEE               EEEE  EE  HH
SS_SPIDER3:    EEEE      EEEEEEE     HHHHHHHHH  HH HHEEEEE      HHHHHH           EEEEEEE       EE      EEEE  E   HH
SS_PSSPRED:    EEEE        EEEE      HHHHHHHH  HHHHHHH          HHHHHH          EEEEEEEEE              EEEE      HH
DO_DISOPRED3:                                                DDDDDDDDDDDDDDD                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDVNKLNVSQQPLLDVEGNLIKMHAADLEKPMVEKQ 400
PathogenicSAV: N                                                                                                   
gnomAD_SAV:    #FY VA DF  ICKQ KC CII K  FG KYIAVS      H  QRDVN   VF   A M   E HIS  D    S   G R     #TV   NS I  P
Conservation:  5525556465435555657565744253433785847886665586475488855857842564335564235223121211222310112121301111
SS_PSIPRED:    HHHHHHHHHHHH       EEEEEEEE HHH          EEE   HHHHHHHHHHHHHHHH     EEE            EEE  HHH         
SS_SPIDER3:    HHHHHHHHHHHHH      EEEEEEEE HHH  E       EEEE  HHHHHHHHHHHHHHH                          HHHH        
SS_PSSPRED:    HHHHHHHHHHHHHH     EEEEEEEE               HHHHHHHHHHHHHHHHHHHHH                                     
DO_DISOPRED3:                                                                        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                            DDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            DQSPSLRTGEEKKDVSISRLREAFSLRHTTENKPHSPKTPEPRRSPLGQKRGMLSSSTSGAISDKGVLRPQKEAVSSSHGPSDPTDRAEVEKDSGHGSTS 500
BenignSAV:                           T   H      S             R                     S    E         K               
gnomAD_SAV:    N  R  # R #  YL LF PQKD   H  S  E Y SEIA  #       KSVPF  IADVV  R I  S RKSA  #QR G TM  V    NL  S SC
Conservation:  0121301111132033544874587442121011111111212011413421022111211121010101011011111011101211112141212222
SS_PSIPRED:                    HHHHHHHHH                                                               HHH         
SS_SPIDER3:                    HHHHHHHHH                                                             HHHH          
SS_PSSPRED:                    HHHHHHHHHH                                                                          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            VDSEGFSIPDTGSHCSSEYAASSPGDRGSQEHVDSQEKAPKTDDSFSDVDCHSNQEDTGCKFRVLPQPTNLATPNTKRFKKEEILSSSDICQKLVNTQDM 600
BenignSAV:               #                         K   #                     L       I S                       S   
gnomAD_SAV:    MEYG  N   MD    RKHVP TSRGGSL*  A Y K # EP ET  #G  D  LQ #RY LL  S #ADITSAS E#      I R H       S  V
Conservation:  1221312422122111220112333010213011001122303113412220102110000021222110013522642713102211111111021120
SS_PSIPRED:                                                                                    HHHH   HHHHHHHHH    
SS_SPIDER3:                      E                                                             H       HH HHH      
SS_PSSPRED:                                                                                    HHH     HHHHHHH     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDDDDD  DDDDDDDDDD                    
MODRES_P:                                                                              T                       T   

                       10        20        30        40        50        60        70        80        90     
AA:            SASQVDVAVKINKKVVPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQ 700
BenignSAV:                          I                                                                     S      H 
gnomAD_SAV:      #   I  E   R  L    R   T Q     R  PE K K*S M*  VRF R      K     K   M      T#        TIQ   N      
Conservation:  1211393552417522151653117224333412422121223169687968498754245588565659449439575766676664344238796686
SS_PSIPRED:     HHH   EEE    EE     HHHHHHHHHHHHHHHHH HHHHHHHHHH        HHHHHHHHHHH HHHHHHHHHHEEE   EEEEEE   EEEE H
SS_SPIDER3:             E           HHHHHHHHHHHHHHHHH  HHHHHHHHH        HHHHHHHHH   HHHHHH EEEEEE   EEEEEE   EEEE  
SS_PSSPRED:           EEEE    EE    HHHHHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHH HHHHHHHHHH      EEEEE    EEEE  
DO_DISOPRED3:  DDDDDDDDDDDDDDDD                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                   
DO_SPOTD:      DDDDDDDDDDDDD              DD  DDDDDDDDDDDDDDDDDDDDDDDDDD                                           
DO_IUPRED2A:                                 DDDDDDDDDDD     DD               D                                    

                       10        20        30        40        50        60        70        80        90     
AA:            HATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMCRP 800
PathogenicSAV:     K                                                                                               
BenignSAV:                                A                                              S             L  N        
gnomAD_SAV:    Y M K    K   LPAMP*  G  VLEA         F       LT KV    TN   S# G G     #   S SIRL  IN MF I  N S I  W 
Conservation:  9767777677397435364376762882846775654584685576546774634442644648469676959657679226655556453536846686
SS_PSIPRED:    HHHHHHHHHHHHHHHH    EE          HHHHHHHHH HHHHHH  EEEEE        EEEEEEEEE       HHHHHHHHHHHH         
SS_SPIDER3:       HHHHHHHHHHHH E EEEE     E    HHHHHHHHH HHHHHH   EEEE        EEEEEEEE        HHHHHHHHHHHH        H
SS_PSSPRED:      HHHHHHHHHHHHHH    EE     EE   HHHHHHHHHHHHHHHHH  EEEE        EEEEEE          HHHHHHHHHHHH        H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60  
AA:            SRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLGVISQN 862
PathogenicSAV:               L                           Y                   
BenignSAV:                                                         M   A     
gnomAD_SAV:     *     T    Q LE TE    I K     AY       *          YMT RA     
Conservation:  66667979977997945666663126666852865544565565696664855548335621
SS_PSIPRED:    HHHHHHHHHHHHHHHHH      HHHHHHHHHHHHH           HHHHHHHHHHH    
SS_SPIDER3:    HHHHHHHHHHHHHHH        HHHHHHHHHHHH            HHHHHHH        
SS_PSSPRED:    HHHHHHHHHHHHHHHH       HHHHHHHHHHHHH           HHHHHHHHHH     
DO_DISOPRED3:                                                               D
DO_SPOTD:                                                                 DDD
DO_IUPRED2A:                                         D DDDDD        D