P54868  HMCS2_HUMAN

Gene name: HMGCS2   Description: Hydroxymethylglutaryl-CoA synthase, mitochondrial

Length: 508    GTS: 2.57e-06   GTS percentile: 0.822     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 21      BenignSAV: 1      gnomAD_SAV: 292      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MQRLLTPVKRILQLTRAVQETSLTPARLLPVAHQRFSTASAVPLAKTDTWPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQE 100
PathogenicSAV:                                                      M                                              
gnomAD_SAV:    T C   AAR# Q  #TV  K   IA H  S TL M  # Y FLP    I    M    M A LLD   N     TC DM T # PEDS  IC    L R 
Conservation:  2222222222222222222222222222222222222101002010010674576523475757456569257835529029799296771267975439
STMI:          TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT                                                               
SS_PSIPRED:        HHHHHHHHHHHHHHH                                   EEEEEEEE    EEEHHHHHHH                       H
SS_SPIDER3:           HHHH HHH H             HHHH                   EEEEEEEEEE   EE HHHHHHH       EEE     E E      
SS_PSSPRED:      HHHHHHHHHHHHHHH             HHHHH                    EEEEEEEE      HHHHHHHH                      H
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                     
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                      
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                      E                    
MODRES_A:                                                                                        K                 

                       10        20        30        40        50        60        70        80        90     
AA:            DINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVY 200
PathogenicSAV:            W                               L                      CSD V  L          R  H            
gnomAD_SAV:    GT Y # M M W   C P TCN#      D D  T  P*   RE # FV H D    Q K IN   CSDI  FL VT#* D  P N HC T   RH  IH
Conservation:  7749677976539232005643267479697775596697697566599347996969967447999977645664349379557795494765799979
SS_PSIPRED:    HHHHHHHHHHHHHHHHH   HHH  EEEEE   HHH  HHHHHHHHHHH       EEEEEE    HHHHHHHHHHHHHHH       EEEEEEEEEEE 
SS_SPIDER3:     HHHHHHHHHHHHHHH    HHH EEEEEE   H    HHHHHHHHHH        EEEEEEE   HHHHHHHHHHHHHHHH      EEEEEEEEEEE 
SS_PSSPRED:    HHHHHHHHHHHHHHHHH   HHH  EEEEEE   HHH HHHHHHHHHHH         EEE      HHHHHHHHHHHHHHH      EEEEEEEEEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
ACT_SITE:                                     E                                 C                                  

                       10        20        30        40        50        60        70        80        90     
AA:            PSGNARPTGGAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIF 300
PathogenicSAV:            R                   V                                 S                                  
gnomAD_SAV:    AR   #    SR  S  TESRG  T K*E  V  #    V *E    L   R #  VP     QGS QR    H R#  ER *GSNNQS SFEN  NIFL
Conservation:  4164666977677776769726653554539563446577766742166492548448435721565446114317212334234112063626426357
SS_PSIPRED:               EEEEEEE     EEEE   EEEEE     EE              HHHHHHHHHHHHHHHHHHHHHHHHHHH        HHH  EEEE
SS_SPIDER3:                EEEEEE     EEEE   EEEE    EEEE                HHHHHHHHHHHHHHHHHHHHHHHHH        HHH  EEEE
SS_PSSPRED:                EEEEEE     EEEE    EEE     EE                 HHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:          N                                                     S                                          
MODRES_A:                                                K            K                                            

                       10        20        30        40        50        60        70        80        90     
AA:            HTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQ 400
PathogenicSAV:  I    T                                                    P                           R            
BenignSAV:                                                                               C                         
gnomAD_SAV:      L  #   R   C V S   LT          R    R      S      N      A*E LE     C   CI # #V  PTM RRP L   R  V 
Conservation:  9596954667745743469840000011110513632832334875835745647422781226225441982442277969969567675756221221
SS_PSIPRED:       HHHHHHHHHHHHHHHHHHH      HHHHH HHHH    HHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHH   HH
SS_SPIDER3:       HHHHHHHHHHHHHHHHHH       HHH   HHH     HHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHH    HH
SS_PSSPRED:    E   HHHHHHHHHHHHHHH         HHH   HHHHH          HHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHH   HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                      N                    
ACT_SITE:      H                                                                                                   
MODRES_A:           K   K                               K       K   K   K                                          

                       10        20        30        40        50        60        70        80        90     
AA:            ELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQHR 500
PathogenicSAV:                                                                      T                             H
gnomAD_SAV:       A KTS  F          T Q #*N V V #    L  I  V  GI# *  M  KD   M  #SQKC R #    #  K I     L   *# KLRH
Conservation:  3437253524558574554254213233014751753431632572079358212381053205128713325333291420018329345723572345
SS_PSIPRED:    H    EEEEEE       EEEEEEE         HHHHHHH   HHHHHH  EE  HHHHHHHHHHHHHH                  EEEEEEE    E
SS_SPIDER3:    HH   EEEEEEE     EEEEEEEE         HHHHHH    HHHHHH  EE  HHHHHHHHHHHHHH                  EEEEEEE     
SS_PSSPRED:    HH   EEEEEE   HHHHEEEEEEEE          HHHHHH  HHHHHHH     HHHHHHHHHHHHHHH                 EEEEEEE HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                    D DDD                                   D                          
MODRES_P:                                      S      S               S                    S                       
MODRES_A:                                          K         K                         K                           

                       
AA:            RKYARRPV 508
PathogenicSAV:   C Q   
gnomAD_SAV:    #  V##AI
Conservation:  81844231
SS_PSIPRED:    EEEEE   
SS_SPIDER3:    EEEEE   
SS_PSSPRED:    HHH     
DO_DISOPRED3:          
DO_SPOTD:              
DO_IUPRED2A:    DDDDDDD