P55317  FOXA1_HUMAN

Gene name: FOXA1   Description: Hepatocyte nuclear factor 3-alpha

Length: 472    GTS: 9.243e-07   GTS percentile: 0.191     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 5      gnomAD_SAV: 246      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLGTVKMEGHETSDWNSYYADTQEAYSSVPVSNMNSGLGSMNSMNTYMTMNTMTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMPGGSAGAMNSMTAAG 100
BenignSAV:                                                                            A          T   E             
gnomAD_SAV:     SA   T     RG    C   HQ CF  S N TK    CT PR     L P S  C I LV LS#    TC   R  S# #TRI RRLV P#    EPC
Conservation:  2101101000101110000012101222112111112322222232322122122225213223432213111122122222121211113133322212
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:        EE                                                                                              
DO_DISOPRED3:  DDDDDDDDDDD    DD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:    DDD DD      D   D           DD                                               DD                    

                       10        20        30        40        50        60        70        80        90     
AA:            VTAMGTALSPSGMGAMGAQQAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWI 200
BenignSAV:                                                                                         R               
gnomAD_SAV:      T##RE G R   V## * V# # D   C DSVSL L  ##N#  SVR  H#  SSND AL C#  Q      N L  SL  H V G   #V   N R 
Conservation:  2332431123102013322221201222111212411351116321110113111111253334244656674544597777474413765595646568
SS_PSIPRED:                  HHH                                                         HHHHHHHHHHH       HHHHHHHH
SS_SPIDER3:                  H                                                           HHHHHHHHHH        HHHHHHHH
SS_PSSPRED:                    HHHHH                                                      HHHHHHHHHH       HHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                  
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                
DO_IUPRED2A:                                                   DD   DDDDDDDDD D                                    
DNA_BIND:                                                                          AKPPYSYISLITMAIQQAPSKMLTLSEIYQWI

                       10        20        30        40        50        60        70        80        90     
AA:            MDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQPGAGGGGGSGSGGSGAKGGPESRKDPSGA 300
gnomAD_SAV:    V#   C       *   V       NR    T  L R           G RIL  S            KT      E V R  ANC  SS   #  L   
Conservation:  2568669635864574549779559647366574554465767775572667664555544444533241121111111111111010000110111111
SS_PSIPRED:    HHH HHHHH HHHHHHHHHH       EEEE             EE             HH                                       
SS_SPIDER3:    HH  H HHH HHHHHHH          EEEEE                    HH     H H                                      
SS_PSSPRED:    HHH HHHHHHHHHHH            EEEE            EE                                                       
DO_DISOPRED3:                                                                  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                         DDDDDDD       DDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                         DDDDDDDDD       D D       D   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DNA_BIND:      MDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYL                                        

                       10        20        30        40        50        60        70        80        90     
AA:            SNPSADSPLHRGVHGKTGQLEGAPAPGPAASPQTLDHSGATATGGASELKTPASSTAPPISSGPGALASVPASHPAHGLAPHESQLHLKGDPHYSFNHPF 400
gnomAD_SAV:    T HR  L F G#  R  R  V  L  W  # R         VARD      ATC ATTL T E RS        S  S  L # H Y   ARDC  S Q 
Conservation:  1101100101011011001011011200111111111111010211212110122111310011101011122211113122421122712334253578
SS_PSIPRED:                                                                     HH               HHHH              
SS_SPIDER3:                                                                                        H               
SS_PSSPRED:                                                                                      HHH               
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DD
MODRES_P:            S                       S                                                                     

                       10        20        30        40        50        60        70  
AA:            SINNLMSSSEQQHKLDFKAYEQALQYSPYGSTLPASLPLGSASVTTRSPIEPSALEPAYYQGVYSRPVLNTS 472
BenignSAV:                                                    N                        
gnomAD_SAV:         L  L  *  V    C   PK  S SFP ## PA VRP     N VK   VA P    L   R   A 
Conservation:  884464431420462465455422132243222322311200111211227122143235322335342321
SS_PSIPRED:     HHHH            HHHHHHH                                                
SS_SPIDER3:                    HHHHHHH                                    E  EE        
SS_PSSPRED:                    HHHHHHHH                                                
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:          DDDDDDDDDDDDD DD  DD    D  DDD DDDDDDDDDDDDDDDDDDD            DDDDDD
DO_IUPRED2A:   DDDDDDDDD DDDDDDDD                  DDDDDDDDDDDDD DD