P56159  GFRA1_HUMAN

Gene name: GFRA1   Description: GDNF family receptor alpha-1

Length: 465    GTS: 1.325e-06   GTS percentile: 0.367     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 4      gnomAD_SAV: 217      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MFLATLYFALPLLDLLLSAEVSGGDRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKETNFSLASGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCL 100
BenignSAV:                  A                                                                      N               
gnomAD_SAV:     L        R  N  RL *   RHC H  NTR R  ND T G   CM   WL D        CRV T N  H  T    H W NS H    VN K   V
Conservation:  3000010001000011010100111123332313041111031021322222213001200101210311231141332212351132324212341233
STMI:          SSSSSSSSSSSSSSSSSSSSSSSS                                                                            
SS_PSIPRED:      HHHHHHHHHHHHHHH           HHHHHHHHHH   HHHHHHHHHHHH              HHHHHHHHHHHHHH             HH HHH
SS_SPIDER3:     HHHHHHHHHHHHHHHHH          HHHHHHHH   H HHHHHHHHHHHH        H     HHHHHHHHHHHHH                  HH
SS_PSSPRED:     HHHHHHHHHHHHHHHH           HHHHHHHHHH   HHHHHHHHHHHH               HHHHHHHHHHHHHH           HHHH HH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_IUPRED2A:                                                                                                       
DISULFID:                                  C      C     C         C                   C              C C         C 
CARBOHYD:                                                                N                                         

                       10        20        30        40        50        60        70        80        90     
AA:            RIYWSMYQSLQGNDLLEDSPYEPVNSRLSDIFRVVPFISDVFQQVEHIPKGNNCLDAAKACNLDDICKKYRSAYITPCTTSVSNDVCNRRKCHKALRQFF 200
gnomAD_SAV:        #  EN RR # Q   SH R    *L T WM  LV G    L PVLRR S    V   S EN       V  IQ  IGM S#  SHC      Q I 
Conservation:  2223322122032432212422211012332221231030010021011113264244345453226342441421252111104173545546586274
SS_PSIPRED:    HHHHHHHHHH                               HH         HHHHHHHHH   HHHHHHHHHHHHHH          HHHHHHHHHHHH
SS_SPIDER3:    HHHHHHHHH                                   H       HHHHHHHH    HHHHHHHHH               HHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHH                               HHHH         HHHHHHHHH  HHHHHHHHHHHH            HHHHHHHHHHHH
DO_DISOPRED3:                    DDD                                                                               
DO_SPOTD:                    DDDDDDDDDDDDDDDD                                                                      
DO_IUPRED2A:                                                                                                       
DISULFID:                                                           C      C     C          C        C    C        

                       10        20        30        40        50        60        70        80        90     
AA:            DKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEEREKPNCLNLQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMTPN 300
gnomAD_SAV:     R L  R  R      LHMT   Q QL  MLL      VR        F  AI #   C EG  S# HR    AG   T   D    T P  T     S 
Conservation:  6453223433647749120652366646547177524413436416201531322336553441127112123143941554239827747679425768
SS_PSIPRED:    HH  HHHHHHEEEEE   HHHHHHHHHH              HHHHHHHHH    HHH HHHHHHH                HHHHHHHH HH       
SS_SPIDER3:    H   HHH E EEE     HHHHHHHHH                HHHHHHH   H  HH  HHHHH  E     H        HHHEH             
SS_PSSPRED:    HH  HHHHH  EEEE   HHHHHHHHHH               HHHHHHH    HHHHHHHHHHH                HHHHHHHHH          
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                   C C    C           C         C      C     C          C         C       C               

                       10        20        30        40        50        60        70        80        90     
AA:            YIDSSSLSVAPWCDCSNSGNDLEECLKFLNFFKDNTCLKNAIQAFGNGSDVTVWQPAFPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVLPPCANLQA 400
BenignSAV:                                                                      A    R                             
gnomAD_SAV:           I   #    T  S   GY E MDI   SAR RSVV G  S  # IM       R IS A A  FW N  S    A     #I    L      
Conservation:  8253113345649490659312249035322823919833452355432301102001200220200102100101000100001012011011312112
SS_PSIPRED:                         HHHHHHHHHHH   HHHHHHHHHH                                                    HH 
SS_SPIDER3:           EE           HHHHHHHHHHHH     HHHHHHH                                                       H
SS_PSSPRED:                         HHHHHHHHHH    HHHHHHHHHH                         HHH                        HHH
DO_DISOPRED3:                                                        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D      D  
DO_SPOTD:                                                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                       DDDDDDDDDDDDDDDDD               
DISULFID:                  C C         C           C                                                               
CARBOHYD:                                                    N                                                     

                       10        20        30        40        50        60     
AA:            QKLKSNVSGNTHLCISNGNYEKEGLGASSHITTKSMAAPPSCGLSPLLVLVVTALSTLLSLTETS 465
gnomAD_SAV:     NQ  S LAS YF VPT      #PS  N #    V       PG  V   I T   P Y #  P
Conservation:  11011204020003012020021100000101100010000001000010100010000000000
SS_PSIPRED:                  EE                           HHHHHHHHHHHHHHHHHHH   
SS_SPIDER3:    HH         EEEE                              HHHHHHHHHHHHHHH     
SS_PSSPRED:    HH          EE                               HHHHHHHHHHHHHHH     
DO_DISOPRED3:                D     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDD       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                            D   DD                                  
PROPEP:                                     HITTKSMAAPPSCGLSPLLVLVVTALSTLLSLTETS
LIPID:                                     S                                    
CARBOHYD:           N