P58304  VSX2_HUMAN

Gene name: VSX2   Description: Visual system homeobox 2

Length: 361    GTS: 1.621e-06   GTS percentile: 0.502     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 6      BenignSAV: 4      gnomAD_SAV: 203      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MTGKAGEALSKPKSETVAKSTSGGAPARCTGFGIQEILGLNKEPPSSHPRAALDGLAPGHLLAARSVLSPAGVGGMGLLGPGGLPGFYTQPTFLEVLSDP 100
PathogenicSAV:                               R                                                                     
BenignSAV:                                                                                                        Q
gnomAD_SAV:    TM    G     R        P D   M#A L  RQ     T  R   R V  E   S Y  V C M    #  V #    RV S   M   #  M PNQ
Conservation:  9000011110010000111000101201112221123231100220111101101000110122210012131022222221321120210121202211
SS_PSIPRED:                  HH                 HHH                       HHHHHH                           HHHH    
SS_SPIDER3:          HH                          HH                       HHHHHH                                   
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDD        DDDDDDDDDDDDDDDDDDDDDDD         D     D DD     D                DD

                       10        20        30        40        50        60        70        80        90     
AA:            QSVHLQPLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRR 200
PathogenicSAV:                                                                                                    #
BenignSAV:       A                                                                                                 
gnomAD_SAV:    # AQF       R P ST K  L     #P# P LCI   Y   EW   Q  A#L F E D M    SKGQ T I  W L TV M  L NT  I*   C*
Conservation:  3001110101000100000000022211201321012111111012122202444321532333332134335223234234324245222455777969
SS_PSIPRED:                                    HHH HHHHH    HHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHH      HHHHHHHHH HH
SS_SPIDER3:                                    HHH HH                  HHHHHHHHHHHHH     HHHHHHHH      HHHHHHH    H
SS_PSSPRED:                                         HHHHHHHHHHHHH     HHHHHHHHHHHHHHH    HHHHHHHH         EE      H
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DD                                                
DNA_BIND:                                                     KRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRR

                       10        20        30        40        50        60        70        80        90     
AA:            AKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESILKSAKDGIMDSCAPWLLGMHKKSLEAAAESGRKPEGERQALPKLDKMEQDERGPDAQAAISQEE 300
PathogenicSAV:                       #   W                                                                         
BenignSAV:                                                                                               N         
gnomAD_SAV:       # Q#MG  WNT  VD    R I W T    G  VQ    D  G  #R  R   R L  P #KA M  D *P  PL       E#WV NS #    D 
Conservation:  9967766669566645656566776766359773446342125313343778484445323111201100012101011010010011101000011111
SS_PSIPRED:    HHHHHH                                             HH      HHHHHH                                HHH
SS_SPIDER3:    HHHHHHHH                                                                                         HHH
SS_PSSPRED:    HHHHHHHH                                                                                         HHH
DO_DISOPRED3:     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                       D                      D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DNA_BIND:      AKWRKRE                                                                                             

                       10        20        30        40        50        60 
AA:            LRENSIAVLRAKAQEHSTKVLGTVSGPDSLARSTEKPEEEEAMDEDRPAERLSPPQLEDMA 361
BenignSAV:                                                     V            
gnomAD_SAV:    MKKK TV# W  V   N R   A   L#G  Q  K L    VV K SLV  F  L   #T 
Conservation:  2452535455533322111102011000101200200000000021000000000002100
SS_PSIPRED:    HHH HHHHHHHHHHHHHHHH        HH        HHHH            HHHHH  
SS_SPIDER3:    H    HHHHH   HHHHHH                   HHHH                   
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHH                 HHH                HHH  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   D   DDDDDD DD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MOTIF:            NSIAVLRAKAQEHS