P60507  EFC1_HUMAN

Gene name: ERVFC1   Description: Endogenous retrovirus group FC1 Env polyprotein

Length: 584


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 0      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MARPSPLCLLLLLTLLTPIVPSNSLLTEPPFRWRFYLHETWTQGNRLSTVTLATVDCQPHGCQAQVTFNFTSFKSVLRGWSNPTICFVYDQTHSNCRDYW 100
Conservation:  9111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
STMI:          SSSSSSSSSSSSSSSSSSSSSS                                                                              
SS_PSIPRED:         HHHHHHHHHHH               EEEEEEEEEE     EEEEEEEEEE        EEEEE                               
SS_SPIDER3:         HHHHHHHHHH               EEEEEEEEEEEE   E  EEEEEEEE        EEEEEEE            EE               
SS_PSSPRED:         HHHHHHHHHHHH               EEEEEEEEE       EEEEEEE         EEEEEE                              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDD                                                                           
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                          N                               

                       10        20        30        40        50        60        70        80        90     
AA:            VDTNGGCPYAYCRMHVTQLHTAKKLQHTYRLTSDGRTTYFLTIPDPWDSRWVSGVTGRLYRWPTDSYPVGKLRIFLTYIRVIPQVLSNLKDQADNIKHQE 200
Conservation:  1111295411111150101111111111120111223041314368651582213133470121342833242635253310111111102220152125
SS_PSIPRED:               EEEEE EEE        EEE      EEEEEE            EEEEEE         EEEEEEEEE    HHHH             
SS_SPIDER3:              EEEEEEE E         EEEE     EEEEEE            EEEEEE        EEEEEEEEE                      
SS_PSSPRED:               EEE                       EEEEE               EEEE         EEEEEE E                      
DO_DISOPRED3:                                                                                       DDDDDDDDDDDDDDD
DO_SPOTD:                                                                                            DDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            EVINTLVQSHPKADMVTYDDKAEAGPFSWITLVRHGARLVNMAGLVNLSHCFLCTALSQPPLVAVPLPQAFNTSGNHTAHPSGVFSEQVPLFRDPLQPQF 300
Conservation:  1271114231111111111121011535672543144144415220525154464463134435474103221301211132112311455312412213
SS_PSIPRED:                                HHHHHHHHHHHHHH        EEEE                                              
SS_SPIDER3:                               HHHHHHHHHHHHHHHH HHHH  EEEEEE     EEE                                    
SS_PSSPRED:                                 HHHHHHHHHHHHH        EEE                                               
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_IUPRED2A:                                                                                D                      
MOTIF:                                                           CFLC                                              
CARBOHYD:                                                    N                        N   N                        

                       10        20        30        40        50        60        70        80        90     
AA:            PFCYTTPNSSWCNQTYSGSLSNLSAPAGGYFWCNFTLTKHLNISSNNTLSRNLCLPISLVPRLTLYSEAELSSLVNPPMRQKRAVFPPLVIGVSLTSSLV 400
Conservation:  5386221222142112112212203437166796255431421211111112473542347454443325511421101122563556433534533832
SS_PSIPRED:                          EE     EEEE     EEE              HHH  EEEEEE  HHHHH                    HHHHHHH
SS_SPIDER3:                  E       E      EEEE      E               HHH   EEEE     HHHH             HHHHHHHHHHHHH
SS_PSSPRED:                                 EEEE                             EEE    HHH                  EEE       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
REGION:                                                                                           AVFPPLVIGVSLTSSLV
SITE:                                                                                            RA                
CARBOHYD:             N    N        N           N       N   N                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            ASGLGTGAIVHFISSSQDLSIKLQMAIEASAESLASLQRQITSVAKVAMQNRRALDLLTADKGGTCMFLGEECCYYINESGLVETSLLTLDKIRDGLHRP 500
Conservation:  4263325422433213225012321333253343246425335343335642345935366365693553757744454664732241261263134211
SS_PSIPRED:    H     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHH    EEE   EEEEEE      HHHHHHHHHHHHH    
SS_SPIDER3:    H      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHEHH     EE   EEEEEE     EHHHHHHHHHHHH     
SS_PSSPRED:           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHH      EE     EEEEE     HHHHHHHHHHHHHH    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:                                                         MQNRRALDLLTADKGGTCMFLGEECC                          
REGION:        ASGL                                                                                                
DISULFID:                                                                       C      C                           
CARBOHYD:                                                                                   N                      

                       10        20        30        40        50        60        70        80    
AA:            SSTPNYGGGWWQSPLTTWIIPFISPILIICLLLLIAPCVLKFIKNRISEVSRVTVNQMLLHPYSRLPTSEDHYDDALTQQEAAR 584
Conservation:  211211212533223222324134545253244343443225222331322122222253337241111111111111001111
STMI:                            MMMMMMMMMMMMMMMMMMMMM                                             
SS_PSIPRED:                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                 HHHHHHHH 
SS_SPIDER3:             H    HHH H H   H HHHHHHH HHHHHHHHHHHHHHHHHHHHHH H                HHHHHHHHH 
SS_PSSPRED:                   HHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                HHHHHHHH 
DO_DISOPRED3:                                                               D DDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                 DDD DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                               D      D