Q01581  HMCS1_HUMAN

Gene name: HMGCS1   Description: Hydroxymethylglutaryl-CoA synthase, cytoplasmic

Length: 520    GTS: 6.971e-07   GTS percentile: 0.102     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 136      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MPGSLPLNAEACWPKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDK 100
gnomAD_SAV:      R    I   R   H  #FGI       F Y  K  I N        T                    L      V  S   C ST W           
Conservation:  1010020100106745765234758574565692578355290297992968712679754397749677976539232005643267479697775596
SS_PSIPRED:                     EEEEEEEE    EEEHHHHHHHH                        HHHHHHHHHHHHHHH    HHH  EEEEE       
SS_SPIDER3:                     EEEEEEEE    EE HHHHHHHH   H H HH     EE        HHHHHHHHHHHHHHH    HHH EEEEEE       
SS_PSSPRED:                     EEEEEEEE       HHHHHHH       EE                HHHHHHHHHHHHHHHH   HHH  EEEEE       
DO_DISOPRED3:  DDDDDDDDDDD                                                                                         
DO_SPOTD:      DDDDDDDDDD                                                                                          
DO_IUPRED2A:                                                                                                       
REGION:                                                   AGK                                                      
ACT_SITE:                                                                                                    E     
MODRES_P:         S                                                                                                
MODRES_A:                                                   K                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            SKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGTHMQH 200
gnomAD_SAV:                   ET  V     I                    #  R C         A  I                  D A    #       H 
Conservation:  6976975665993479969699674479999776456643493795577954947657999794164666977677775769726653554539563446
SS_PSIPRED:     HHHHHHHHHHHH      EEEEEE    HHHHHHHHHHHHHHH       EEEEEEEEEEE            EEEEEEE     EEEE   EEEEEE 
SS_SPIDER3:     HHHHHHHHHHH       EEEEEE    HHHHHHHHHHHHHHHH      EEEEEEEEEEE            EEEEEEE     EEEE   EEEEEEE
SS_PSSPRED:     HHHHHHHHHHH         EEE      HHHHHHHHHHHHHHH      EEEEEEEEEEE            EEEEEEE     EEEE    EEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                         N                                 
ACT_SITE:                                  C                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            AYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEA 300
gnomAD_SAV:           H P    V      V   FT   C  F   Q  R         RH     V  V      S     C    S     S  S N #T      V
Conservation:  5777667421664925484484357215654461143172123342341120636264263579596954667745743469840040001110513632
SS_PSIPRED:                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHH EEEE    HHHHHHHHHHHHHHHHHH            HHH
SS_SPIDER3:    EEE E                HHHHHHHHHHHHHHHHHHHHHHHHH        HHH  EEEE    HHHHHHHHHHHHHHHHH             HHH
SS_PSSPRED:                         HHHHHHHHHHHHHHHHHHHHHHHHHH       HHHEEEEEEE    HHHHHHHHHHHHH               HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                               D          
DO_IUPRED2A:                                                                                                       
BINDING:                           S                                               K   K                           
ACT_SITE:                                                                     H                                    
MODRES_A:                                                                              K                           

                       10        20        30        40        50        60        70        80        90     
AA:            FGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDK 400
gnomAD_SAV:    L V    N     G     L       G               KC                      R      F      I      IR G L      
Conservation:  8323348758357456474227812262254419824422779699695676757562212213437253524558574554254213233014751753
SS_PSIPRED:    H    HHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHH  HHHH   EEEEEE       EEEEEEE        HHHH
SS_SPIDER3:                HHHHHHHHHHHHHHHHHHHHHHHHHHHH H HHHHHHHHHHHHHHHH  HHHH   EEEEEEE     EEEEEEEE        HHHH
SS_PSSPRED:    H           HHHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHH   HHH    EEEEEE   HHHHHEEEEEEE       HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ITASLCDLKSRLDSRTGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYLVRVDEKHRRTYARRPTPNDDTLDEGVGLVHSNIATEHIPSPAKKV 500
gnomAD_SAV:         Y       A  C    I T       G  R  S   K  TAL SQ M F  G         VQHRI SVGS N  I V R DV   LNST  R L
Conservation:  4316325720793582123810532051287133253332914200183293457235723458184423112200522413110200316335664666
SS_PSIPRED:    HHHHH  HHHHHHH EE  HHHHHHHHHHHHHH           HHH     EEEEEE    EEEEEE                                
SS_SPIDER3:    HHHH   HHHHHH  EE  HHHHHHHHHHHHHH           HHH    EEEEEEE     EEEEE E            EE                
SS_PSSPRED:    HHHHHH HHHHHHH     HHHHHHHHHHHHHH                  EEEEEEE    EEEEEE               E                
DO_DISOPRED3:                                                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                             DDDDDDDDDDDD   DDDDDDDDDDDDDD
DO_IUPRED2A:                         DDD                                      DDDDDDDDDDDDDDDDDDDDDDDDDD DD DDDDDDD
MODRES_P:                                                                                 T                  S     

                       10        20
AA:            PRLPATAAEPEAAVISNGEH 520
gnomAD_SAV:    S    A   T   # I   Y
Conservation:  67462213110022333537
SS_PSIPRED:               EEEEE    
SS_SPIDER3:              E EE      
SS_PSSPRED:               EEEE     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDD
MODRES_P:                     S