Q02809  PLOD1_HUMAN

Gene name: PLOD1   Description: Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1

Length: 727    GTS: 3.408e-06   GTS percentile: 0.947     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 6      BenignSAV: 13      gnomAD_SAV: 432      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MRPLLLLALLGWLLLAEAKGDAKPEDNLLVLTVATKETEGFRRFKRSAQFFNYKIQALGLGEDWNVEKGTSAGGGQKVRLLKKALEKHADKEDLVILFAD 100
BenignSAV:                                                                       D                T              T 
gnomAD_SAV:    V       P  S     T     R    SA M  N D KR CC  CL   L  N RVPA #K  K G  M  CR   I  V ETV   S R NP V  T 
Conservation:  3222222222220000002222202337664858623357506522532255534543924317131110226475644634134113213242665344
STMI:          SSSSSSSSSSSSSSSSSS                                                                                  
SS_PSIPRED:     HHHHHHHHHHHHHHHHH         EEEEEEE    HHHHHHHHHHHH   EEEEE                HHHHHHHHHHHHH      EEEEEEE
SS_SPIDER3:     HHHHHHHHHHHHHHHHH      HHHEEEEEE     HHHHHHHHHHHH   EEEEEE    E          HHHHHHHHHHHHHH      EEEEE 
SS_PSSPRED:      HHHHHHHHHHHHHHH          EEEEEE      HHHHHHHHHHHH  EEEEE                 HHHHHHHHHHHHH      EEEEEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SYDVLFASGPRELLKKFRQARSQVVFSAEELIYPDRRLETKYPVVSDGKRFLGSGGFIGYAPNLSKLVAEWEGQDSDSDQLFYTKIFLDPEKREQINITL 200
BenignSAV:                        S                                                 V              N  F            
gnomAD_SAV:    G NMV V  SQ      PKSS    V D       C VQ  *L   ESRT  V# DVVS          V   RG  RN P  #N SF L   D  S   
Conservation:  5544555646174717713223345746513458422631368041196768465666943315125521722153476766662465620251134548
SS_PSIPRED:       EEE   HHHHHHHHHH    EEEEE       HHHHHH               EEEEHHHHHHHHHH        HHHHHHHHH  HHHHHH   EE
SS_SPIDER3:       EEE   HHHHHHHHHH   EEEEEEE      H HHH   EE    E      E   HHHHHHHHH         HHHHHHHHH  HHHHH   EEE
SS_PSSPRED:       EEE   HHHHHHHHHHH   EEEEE                            EE  HHHHHHHHHHH       HHHHHHHHH  HHHHH   EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                    N                                 N   

                       10        20        30        40        50        60        70        80        90     
AA:            DHRCRIFQNLDGALDEVVLKFEMGHVRARNLAYDTLPVLIHGNGPTKLQLNYLGNYIPRFWTFETGCTVCDEGLRSLKGIGDEALPTVLVGVFIEQPTPF 300
BenignSAV:                                                                        A                                
gnomAD_SAV:    N H GT  D   # AKAMP   TSRA V     NAILF MR  E SR#H  #PDD SLH  ICQRD#AM  K S#GIRDT#V T SM   SM  K LML 
Conservation:  7345258747397354525484113484473255568536687446542467679867229422168117103111411102212704145476464488
SS_PSIPRED:        EEEEE      EEEEEEE  EEEEEE EE    EEEE                                             EEEEEEEE   HHH
SS_SPIDER3:       EEEEEEE     EEEEEEE  EEEEEE  E    EEEE     EEEE     E     E     E     H             EEEEEEE    HH
SS_PSSPRED:         EEE       EEEEEE    EEEEEE      EEEE      EE                                     EEEEEEEEE   HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            VSLFFQRLLRLHYPQKHMRLFIHNHEQHHKAQVEEFLAQHGSEYQSVKLVGPEVRMANADARNMGADLCRQDRSCTYYFSVDADVALTEPNSLRLLIQQN 400
BenignSAV:      Y                                                                              M                   
gnomAD_SAV:    MYVL  WF WFL A TN #  NYD D  Y   M D       KF CA  A #D W VKV  G V T P W GS   S   M   M P K K  #  MP  
Conservation:  4226612611417511131453452413721341042113201411322446521411225732523165231183577746344442411343274535
SS_PSIPRED:    HHHHHHHHHH       EEEEEE    HHHHHHHHHHHHHHH   EEEEE       HHHHHHHHHHHHHH     EEEEE        HHHHHHHHH  
SS_SPIDER3:    HHHHHHHHH     HHHEEEEE    H HHHHHHHHHHHH  H  EEEEE     HHHHHHHHHHHHHHHH     EEEEE        HHHHHHHHH  
SS_PSSPRED:    HHHHHHHHHH       EEEEE    HHHHHHHHHHHHHHH    EEEEE     HHHHHHHHH HHHHH      EEEEE   EEE  HHHHHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                   D                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            KNVIAPLMTRHGRLWSNFWGALSADGYYARSEDYVDIVQGRRVGVWNVPYISNIYLIKGSALRGELQSSDLFHHSKLDPDMAFCANIRQQDVFMFLTNRH 500
PathogenicSAV:                                              G                                                      
BenignSAV:                                                                                                       W 
gnomAD_SAV:     DI VS   W RK RL  RWS   H  D C   *M#  * QC       CV DVCV      WC         Y R  S  # S Y W    LV    QL
Conservation:  5244464345024687567846425466686678356533262647879843345553613861350102270111252644461215252345554733
SS_PSIPRED:       EE                     EEE            EEEEEE   EEEEEEEEHHHH HHH            HHHHHHHHHHH  EEEEEE HH
SS_SPIDER3:      EEEE E            E      EE   H HEHHH EEEEEEE   EEEEEEE HHHHHHHH            HHHHHHHHH    EEEEEE HH
SS_PSSPRED:       E                             HHHHH  EEEEEEE   EEEEEEE HHHHHHHHHH          HHHHHHHHHHHH EE EE  HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            TLGHLLSLDSYRTTHLHNDLWEVFSNPEDWKEKYIHQNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHFGQWSLGNNKDNRIQGGYENVPTID 600
BenignSAV:                                K                                                                        
gnomAD_SAV:    I  R F  V *C  Y YKNF  L  S KY   Q LRH C   P R   *MS L  C  #V MD  Y #    V   V  PV S   TC HC H* ML M 
Conservation:  1685464312734254446474552542563426541343134221123389787588744432474445334623618625142415517836456655
SS_PSIPRED:    HHHHH            HHHHHHH  HHHHHHHH    HHHHH                   HHHHHHHHHHHHHHHHH                     
SS_SPIDER3:    HHHHH            HHHHHHH    HHHH H    HHHHH     E             HHHHHHHHHHHHHHH               E       
SS_PSSPRED:    HH               HHHHHH     HHHHHH    HHHHH                   HHHHHHHHHHHHHHH                       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                           N                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            IHMNQIGFEREWHKFLLEYIAPMTEKLYPGYYTRAQFDLAFVVRYKPDEQPSLMPHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPRKGWTLMH 700
PathogenicSAV:            C                                                      T          R                      
BenignSAV:                                                                                                L        
gnomAD_SAV:     QTD F##*W *Q  V K  VLVMK  * SCC T *   V  IC R VK   R#     F      T  Q RA    RV QI CHS   *VL      LR
Conservation:  4743742441363446224444454245564243414155755654323532527533444433443432230544555344243341413653354434
SS_PSIPRED:    EEHHH   HHHHHHHHHHHHHHHHHHH         EEEEEEEEE                EEEEEE             EEE    EE     EEEEEE
SS_SPIDER3:     EH H   HHHHHHHHHH  HHHHHHH        EEEEEEEEE                 EEEEEEEE          EEE  EE  EE  EEEEEEEE
SS_PSSPRED:    EE     HHHHHHHHHHHHHHHHHHHH        EEEEEEEEE                 EEEEEEE           EEEE            EEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                                                H D                                          
CARBOHYD:                                                                                           N              

                       10        20       
AA:            PGRLTHYHEGLPTTRGTRYIAVSFVDP 727
PathogenicSAV:     MR                     
gnomAD_SAV:      * M  L  F  I   C  #   #N 
Conservation:  643456355656322545553446443
SS_PSIPRED:                  EEEEEEEEEEE  
SS_SPIDER3:                   EEEEEEEEEE  
SS_PSSPRED:                    EEEEEEEE   
DO_DISOPRED3:                             
DO_SPOTD:                                 
DO_IUPRED2A:                              
METAL:                H                   
ACT_SITE:                       R