Q03692  COAA1_HUMAN

Gene name: COL10A1   Description: Collagen alpha-1(X) chain

Length: 680    GTS: 2.418e-06   GTS percentile: 0.785     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 21      BenignSAV: 20      gnomAD_SAV: 443      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLPQIPFLLLVSLNLVHGVFYAERYQMPTGIKGPLPNTKTQFFIPYTIKSKGIAVRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPP 100
PathogenicSAV:                  #                                                                                  
BenignSAV:            W      V           T                      R                                   R           R  
gnomAD_SAV:    T SR  VW      V   ELHV *H I      SVSD   E L   ITEN  RP TEK  I   T    LQ #AD  AS E  D V  R  ED EM  R#
Conservation:  1001112213011002121111133112202332122111213144111121112143272392283111184393411391141602710823632733
STMI:          SSSSSSSSSSSSSSSSSS                                                                                  
SS_PSIPRED:        HHHHHHHEE                                                                                       
SS_SPIDER3:          EEEEEEEEEEEEE                                                                                 
SS_PSSPRED:        HHHHEEEEEEE                                                                                     
DO_DISOPRED3:  BBBBDDDDDDDD DDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDD   D  DD D DDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                              D DDDDDDDDD   D          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPG 200
BenignSAV:                                N         Q                                                           H  
gnomAD_SAV:    * * A  RAA    E   K R #   ENA   A   SQR TEAS  LRL R          # IE S  KD S    VS       H WDTE  VS CS 
Conservation:  8242265491591586290190280282191191192281393392586383531643911911913813823914902913801916851527138149
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            ERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGK 300
BenignSAV:             S                                                Q                     I                    
gnomAD_SAV:    # #   SRSTRE YDH #A  KRK   SA #   S    TR  R#T LR#     R Q#SQDV  S V R  #K R L INA LRT #V  # #H  C T
Conservation:  0291192192292291262632911913813902810913911910911911911914921227238018168137119167127126126038136374
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPK 400
BenignSAV:                                                                                       R          R      
gnomAD_SAV:    RRW #  R TR D F E T#V EKHR S  LV     #LLRSRAS E  DNL G D L # C AE PRSP C  T   KC SRLE I      LD H   
Conservation:  3712814922911912813914942910901901921921711722811913910912814750900921801913921822811932503831911921
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGH 500
BenignSAV:                                                      N                                                  
gnomAD_SAV:     D R R   RNT  E#TSSFS #   GRT* T R   KS   DT  T  S SS#VSRRF #LSAF  #  R RS  RV LE    S L RLA TA   SY
Conservation:  9019128179309019229049108119179019019119029117257119428418227228178319147149133130371163163361271080
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDD    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SGEPGLPGPPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHYDPRTGIFTCQIPGIYYFS 600
PathogenicSAV:                                                                                  D        #   # #DSP
BenignSAV:                                                 R                                         R             
gnomAD_SAV:      #     #R L    S  ALT D  NT  TL P EAT  G   EI  VL##       RVN  TR LTT#NT  C    Y     RV #  V       
Conservation:  1801912724636834521110121112311011021111111101020126795616314672332862833455933339431682956145949795
SS_PSIPRED:                                                                                            EE     EEEEE
SS_SPIDER3:                                                                            E              EEEE       EE
SS_PSSPRED:                                                                                            EEE     EEEE
DO_DISOPRED3:   D  DDDDBB DDDD  D DDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDD                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                          
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D                                                       

                       10        20        30        40        50        60        70        80
AA:            YHVHVKGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLVAPM 680
PathogenicSAV:              P  KV                         R   #  R P                 P         
BenignSAV:       M                                                                            #
gnomAD_SAV:     YMY     A AV FM C      ##KH E #       V VH I  E        DKL  I PC  AY   L #VAPTK
Conservation:  74464782446678459217347686852563597479847429102836556474243585664345664859574332
SS_PSIPRED:    EEEE    EEEEEE        EEHH       HH             HHHHHHHHHHH       EEE    EEEE   
SS_SPIDER3:    EEEE      EEH         EHHHHHH          E        HHHH     H       EEEE   EEHE    
SS_PSSPRED:    EEEEE   EEEEEE                                  HHH     HHHH      EEE           
DO_DISOPRED3:                                     DDDD  DDD    DD                              
DO_SPOTD:                                                                                      
DO_IUPRED2A:                                                                                   
METAL:                                  DE     LD