Q05209  PTN12_HUMAN

Gene name: PTPN12   Description: Tyrosine-protein phosphatase non-receptor type 12

Length: 780    GTS: 4.173e-07   GTS percentile: 0.026     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 3      gnomAD_SAV: 334      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEQVEILRKFIQRVQAMKSPDHNGEDNFARDFMRLRRLSTKYRTEKIYPTATGEKEENVKKNRYKDILPFDHSRVKLTLKTPSQDSDYINANFIKGVYGP 100
PathogenicSAV:                                                             R                                       
gnomAD_SAV:     K G #  N  H  R    S  T  ES TQ  IW            #  A I     D T                    AL  H      SL   IC  
Conservation:  0000000000110110220010000110102223862763337255474512662229268999999575545582614122216427797655594123
SS_PSIPRED:     HHHHHHHHHHHHHHH          HHHHHHHHHHHHHHHHH       HHH  HHHHH             EEE           EEEEEEE      
SS_SPIDER3:      HHHHHHHHHHHHHH          HHHHHHHHHHHH H           H    HHHHH          EEEEEEE         EEEHEEE      
SS_PSSPRED:     HHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHH                              EEE                        
DO_DISOPRED3:  D                                                                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                   D   DD                              D     D                                         
BINDING:                                          R                                                                
REGION:                                                                      RYKDI                                 
MODRES_P:                        S                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            KAYVATQGPLANTVIDFWRMIWEYNVVIIVMACREFEMGRKKCERYWPLYGEDPITFAPFKISCEDEQARTDYFIRTLLLEFQNESRRLYQFHYVNWPDH 200
gnomAD_SAV:              T  I           I    TT   Y            WHRAVAVM ER           S        I  H   CW     H      
Conservation:  3496899998227548669946543516666684567565898839440012112013571515325206237238281423121273428689249899
SS_PSIPRED:     EEEEE    HHHHHHHHHHHHH   EEEEE   HHH                 EEE  EEEEEE  EE   EEEEEEEEEE  EEEEEEEEEE      
SS_SPIDER3:     EEEEEE    H HHHHHHHHHHH  EEEEE  H EH                 EEE  EEEEEE EEE   EEEEEEEEEE  EEEEEEEEEE      
SS_PSSPRED:     EEEEE      HHHHHHHHHHHE EEEEEE HHHHHH                EEE  EEEEE        EEEEEHHHHE    EEEEEE        
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                                         D 

                       10        20        30        40        50        60        70        80        90     
AA:            DVPSSFDSILDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQLQL 300
gnomAD_SAV:          G    V N   R        V                M H     R  R R         K         I           VV   C   Q P
Conservation:  5783632568565144703912323759697999979797655678452864232431263642463488468443887558836753552277243311
SS_PSIPRED:          HHHHHHHHHHHHH       EEEE          EEHHHHHHHHHH         HHHHHHHHHH        HHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:         HHHHHHHHHHHHHH       EEEEE        EEEEEEHHHHHHH         HHHHHHHHHH HHH    HHHHHHHHHHHHHHHHHH  H
SS_PSSPRED:          HHHHHHHHHHHHH       EEEE         EEEHHHHHHHHHHH        HHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                 DDDDDDD                 D
DO_IUPRED2A:                                                                            D  DD                      
BINDING:                                                                                    Q                      
REGION:                                      CSAGCGR                                                               
ACT_SITE:                                    C                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            YEIHGAQKIADGVNEINTENMVSSIEPEKQDSPPPKPPRTRSCLVEGDAKEEILQPPEPHPVPPILTPSPPSAFPTVTTVWQDNDRYHPKPVLHMVSSEQ 400
BenignSAV:                          I                                                                              
gnomAD_SAV:       R D R PVA   #S  DILNPT   Q H  T     I#  I KEN E     S   RLM  VWIT STLV  A AA RR #   YQ   VRI    E
Conservation:  2110001231311121112110000201001111312101010212120222101030110102001011232112202010111011222102002110
SS_PSIPRED:    HHHHHHHHHH                HHH                    HHHH                         EE           EEEE     
SS_SPIDER3:     HHH HHHH                 HH                     HH                         EEEEE     E    EEEE     
SS_PSSPRED:    HHHHHHHHH                                       HHHH                        EEEEE            E      
DO_DISOPRED3:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                             D
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDD
MODRES_P:                                     S                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            HSADLNRNYSKSTELPGKNESTIEQIDKKLERNLSFEIKKVPLQEGPKSFDGNTLLNRGHAIKIKSASPCIADKISKPQELSSDLNVGDTSQNSCVDCSV 500
gnomAD_SAV:    PL   S  C ILI    R DLAVG TV TF #     S    FR  T  #   I  # ERGT M  VL#YRTN  C      A  S SNNC# C#  YR 
Conservation:  0131130101110101000101000111111111432101111122131212211223213221200131001102011220011000100110000011
SS_PSIPRED:      HHH                 HHHHHHHHHHH     EE                                     HHHH                   
SS_SPIDER3:        H                 HHHHHHHHHH       E                     EE  E           HH                     
SS_PSSPRED:                           HHHHHHHHHH                             EE                                    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDD DDDDDDDDDDDDDDDDDDD         DD  DDDDDDDDDDDDDDDDD  DDDDDDDDD
MODRES_P:                                        S             S                  S                                

                       10        20        30        40        50        60        70        80        90     
AA:            TQSNKVSVTPPEESQNSDTPPRPDRLPLDEKGHVTWSFHGPENAIPIPDLSEGNSSDINYQTRKTVSLTPSPTTQVETPDLVDHDNTSPLFRTPLSFTNP 600
BenignSAV:                                                                             A                           
gnomAD_SAV:    AHLDE LL SL  F   GI  M#YC L     D M         #  A  P  S  GTT  PK ALN   G A  I  S  L Y#   SV   #PC    
Conservation:  0011012013111010000111212110001110122122201001020111100010011101021112120001201010001123210236566333
SS_PSIPRED:               HHH                                                                                      
SS_SPIDER3:                                     E                                                                  
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:              T         T                                               S T S                        S T  

                       10        20        30        40        50        60        70        80        90     
AA:            LHSDDSDSDERNSDGAVTQNKTNISTASATVSAATSTESISTRKVLPMSIARHNIAGTTHSGAEKDVDVSEDSPPPLPERTPESFVLASEHNTPVRSEWS 700
gnomAD_SAV:    F     VT KG  N  A   EIS  A T     P INK  F #    V T T    #A   D D       H        ASDL M  GGR # A L G 
Conservation:  1222001110000000001100113222512011001001012422231110100110000100110111021225322431344231122001102001
SS_PSIPRED:                                 EE                  EE                                 EEE             
SS_SPIDER3:                                                E   HHE                                 EE              
SS_PSSPRED:                                                                                         EE             
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:        S  S S    S                                                           S               S   T       

                       10        20        30        40        50        60        70        80
AA:            ELQSQERSEQKKSEGLITSENEKCDHPAGGIHYEMCIECPPTFSDKREQISENPTEATDIGFGNRCGKPKGPRDPPSEWT 780
BenignSAV:          K                                                                          
gnomAD_SAV:    KP I KQC K T  C VI  Y     AS VVR V    R S  G#R   VPG LR         *   SRV    A VC 
Conservation:  01010110201011010111112111211101010100010101100111101010011223111112223311241022
SS_PSIPRED:         HHHH                                               HHH                     
SS_SPIDER3:                                   E E                     HH                       
SS_PSSPRED:          HHHH                                                                      
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     D                
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                     
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDD DDD  DDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD