Q05586  NMDZ1_HUMAN

Gene name: GRIN1   Description: Glutamate receptor ionotropic, NMDA 1

Length: 938    GTS: 6.718e-07   GTS percentile: 0.093     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 43      BenignSAV: 16      gnomAD_SAV: 159      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSTMRLLTLALLFSCSVARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPND 100
BenignSAV:                                                       RG                                                
gnomAD_SAV:    LRA H  P           T   S  I     V    YGH     M  G RG   *           N #T   G    KE                #S 
Conservation:  3333322224331225163244243134265454234334144235035301242232243443233311123212132301312257544445682423
STMI:          SSSSSSSSSSSSSSSSSS                                                                                  
SS_PSIPRED:     HHHHHHHHHHHHHHHHHHH     EEEEEEEE   HHHHHHHHHHHHHHHH      EEEEEEE     HHHHHHHHHHHHHHH  EEEEE        
SS_SPIDER3:      HHHHHHHHHHHHHHHHH      EEEEEEE     HHHHHHHHHHHHHHHH    EEE EEEEE    HHHHHHHHHHHHHH    EEEE        
SS_PSSPRED:      HHHHHHHHHHHHHH         EEEEEEE     HHHHHHHHHHHHHHH     EEEEEEEE     HHHHHHHHHHHHHHH EEEEEE        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDD                                                                                
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDD                                                                                
DO_IUPRED2A:                                             DDD                                                       
DISULFID:                                                                                    C                     
CARBOHYD:                                                                  N                                       

                       10        20        30        40        50        60        70        80        90     
AA:            HFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDPG 200
PathogenicSAV:          I       M                                                                                  
BenignSAV:                           N                                                                             
gnomAD_SAV:     C            H A      #              P  S      N   Q IH S          N#   QV                    L V  
Conservation:  4675763753743275772755444545755554684657554455542687445514284634444434436654223433363124445545535254
SS_PSIPRED:        HHHHHHHH     EEE                EE     HHHHHHHHHHHHHH    EEEEEEE    HHHHHHHHHHHHH     EEEEEE    
SS_SPIDER3:        HHHHHHHHH    EEEE              EEEE    HHHHHHHHHHHHHH    EEEEEEE     HHHHHHHHHHH      EEEEEE    
SS_PSSPRED:         HHHHHH      EEEE            HHH       HHHHHHHHHHHHHHH   EEEEEE     HHHHHHHHHHHHHHHHHHHHHHH     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:    DD                                                                          DDDDDD           DD    

                       10        20        30        40        50        60        70        80        90     
AA:            TKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGILGLQLINGKNESAHISDAVGVVAQAVHELLEKEN 300
PathogenicSAV:                 W         H                                                                         
BenignSAV:         M                                                              R                                
gnomAD_SAV:       MMV  TDT     Q V     G     I  TP           * L       S         IR           P   P  LA H          
Conservation:  4344633525542447843596754368314542621645475755646545544624522443533464745545543651574434454534563444
SS_PSIPRED:       HHHHHHHHHH    EEEEE  HHHHHHHHHHHHH        EEEE                EEEEEEE     HHHHHHHHHHHHHHHHHHHHH  
SS_SPIDER3:       HHHHHHHHH    EEEEE   HHHHHHHHHHHHH       EEEEEE                EEEEE     HHHHHHHHHHHHHHHHHHHHHH  
SS_PSSPRED:       HHHHHHHHHHH   EEEEE  HHHHHHHHHHHHHH      EEEEE                  EEE       HHHHHHHHHHHHHHHHHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:        N                                   N                                    N                       N

                       10        20        30        40        50        60        70        80        90     
AA:            ITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLKI 400
BenignSAV:                                   V      L          S         H      M                                  
gnomAD_SAV:    S  R  V                  V    V     HM  S  R Q  SSC V     H  M MRM   S   L         R     G   I      
Conservation:  3646454677555763447473456654761474776476766656454254534354133454546566242256644536765765919769995996
SS_PSIPRED:                      HHHHHHHHH EEE     EEEE     EEEEEEEEEEE     EEEEEEE                            EEEE
SS_SPIDER3:                      HHHHHHHH  EEE    EEEEE     EEEEEEEEEEE    EEEEEEEE           E                EEEE
SS_PSSPRED:                       HHHHHHHH  E      EEEE         EEEEEE       EEEEEE                            EEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:     D   DDD                                                                     DDD  DD      D        
DISULFID:             C                                                                                            
CARBOHYD:                                                       N                 N                                

                       10        20        30        40        50        60        70        80        90     
AA:            VTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNG 500
BenignSAV:                       A             N             H                                                     
gnomAD_SAV:              I    R  A    #   RNS  T   A  T   RS AH A  H   S   #   M     T                       N     
Conservation:  5443549645444410353514203259315446263663231462454333366565655854398133476475974348454334373477777779
SS_PSIPRED:    EE     EEEEE                     EE                       HHHHHHHHHHH    EEEEE        EEEE      EE  
SS_SPIDER3:    EE     EEEEE       E         HHHHEE                      HHHHHHHHHHHH    EEEEE     E  EEE           
SS_PSSPRED:    EEE    EEEEE                                             HHHHHHHHHHHHH  EEEEEEE                     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                     DDDDDDDDDDD D                                          DD   D     
DISULFID:                         C               C                 CC                                             
CARBOHYD:                                             N                              N                   N         

                       10        20        30        40        50        60        70        80        90     
AA:            MMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDA 600
PathogenicSAV:                                H   R           QR  E    #                                           
BenignSAV:                                            M                                                            
gnomAD_SAV:          #    T         D P                      T                                  HL         T       
Conservation:  7777795747574459357777577977775545797757999535434334555795777757557757557575755557436594557557597797
STMI:                                                                     MMMMMMMMMMMMMMMMMMMMM                    
SS_PSIPRED:    HHHHHHH    EEE       HHH  EEE        EEEEEE                HHHHHHHHHHHHHHHHHHHHHHHH                 
SS_SPIDER3:    HHHHHH     EEE  EEE    EEEEEE    EEEEEEEEEE        HHHH    HHHHHHHHHHHHHHHHHHHHHHHH                 
SS_PSSPRED:    HHHHHHH          E  HHHHHHHH         EEEEEEE             HHHHHHHHHHHHHHHHHHHHHHHHH                  
DO_DISOPRED3:                                             D      D                                                 
DO_SPOTD:                                                                                                 DDDDDD   
DO_IUPRED2A:                                                                                                       
BINDING:                             R                                                                             
REGION:                       PLT                                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            LTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS 700
PathogenicSAV:                S R R                V   #L MS #  # VGC    W  K       T                 #            
BenignSAV:                                                                                      S                  
gnomAD_SAV:                            *                                                           R        P      
Conservation:  7777945945442352434234455644555559775977777977799999999997999977797749433373336575777995777977777999
STMI:            IIIIIIIIIIIIIIIIIIIIII      MMMMMMMMMMMMMMMMM                                                     
SS_PSIPRED:      HHHHHHHHHHHHH           HHHHHHHHHHHHHHHHHHHHHHHHHHHHH              HHH       EEEE    HHHHHHHH   HH
SS_SPIDER3:      HHHHHHHHHHHH            HHHHHHHHHHHHHHHHHHHH HHHHHHHEE  E E        H H       EEEEE   HHHHHHHH   HH
SS_PSSPRED:     HHHHHHHHHHHHHH          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                      EEEEEE    HHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                     DD                                
BINDING:                                                                                              S            
REGION:          LSSAMWFSWGVLLNSGIGEGAP                                                                            
CARBOHYD:                                                                               N                          

                       10        20        30        40        50        60        70        80        90     
AA:            TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS 800
PathogenicSAV:                                            Y                                                 Q      
gnomAD_SAV:            Y                               W    P                  G L    L                            
Conservation:  7779999997975763535534437777577977775775745775777755779775777777779755475757944434474536522656344434
SS_PSIPRED:    HHHHHHHH     HHHHHHHHHH    EEEEHHHHHHHHH     EEEE   HH     EE       HHHH HHHHHH    HHHHHHHHHHH      
SS_SPIDER3:    HHHHHHHH     HHHHHHHHH    HEEHEHHHHHHHH      EEEE  E    EEEEE       H  HHHHHHH      HHHHHHHHH       
SS_PSSPRED:    HHHHHHHHH    HHHHHHHHHH    EEEEHHHHHHHHHH    EEEE  HHH                 HHHHHHHH     HHHHHHHHH       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                      D                                                                    
DISULFID:                                                 C                                                     C  
CARBOHYD:                                                                            N                             

                       10        20        30        40        50        60        70        80        90     
AA:            RSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRAITSTLASSFKRRRSSKDT 900
PathogenicSAV:      E       D# LL        R       T        C                                                        
BenignSAV:                                                                                                     F   
gnomAD_SAV:                            M       L     #     Q           L            T               I          F  M
Conservation:  4312543433422263336727524373677545556454754775977999799999997972523345352621233333222323111413321221
STMI:                      MMMMMMMMMMMMMMMMMMMMM                                                                   
SS_PSIPRED:             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                HHHHHHHHHHHHHH       
SS_SPIDER3:             HHHHHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHH                 HH    H HHHH H       
SS_PSSPRED:             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHH                  HHHHHHHHHHHHHH       
DO_DISOPRED3:                                                                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                 DDDDDDDDDDDDDDDDDD          DDDDDDDDDD
MODRES_P:                                                                                              SS     SS   

                       10        20        30        
AA:            STGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRES 938
gnomAD_SAV:    R     R           Q                   
Conservation:  33333333333331002133333333204341132031
SS_PSIPRED:                      HHHHHHHHHHH HHHH    
SS_SPIDER3:              H       HHHHHHHHHHHHH HH    
SS_PSSPRED:                      HHHHHHH   HHHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDD     DDDDDDDDDDDD