Q06643  TNFC_HUMAN

Gene name: LTB   Description: Lymphotoxin-beta

Length: 244    GTS: 9.652e-07   GTS percentile: 0.209     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 6      gnomAD_SAV: 116      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGALGLEGRGGRLQGRGSLLLAVAGATSLVTLLLAVPITVLAVLALVPQDQGGLVTETADPGAQAQQGLGFQKLPEEEPETDLSPGLPAAHLIGAPLKGQ 100
BenignSAV:                                                                          E             R  F             
gnomAD_SAV:    # T EM S  A P ES          S Q  FM   A  I  L S  L*G    ###R  REV #H#R#EV # LDQ## RNFNTRF D   #S    E 
Conservation:  9732354323345435546964445332534664366344545435284334314322232324243424122322201212132037669667420022
STMI:                            MMMMMMMMMMMMMMMMMMMMMMMMMMMMMM                                                    
SS_PSIPRED:                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH             HHHH                                 
SS_SPIDER3:                   HH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                         H E       
SS_PSSPRED:                      HHHHHH  HHHHHHHHHHHHHHHHHHHHH                HHHHH                                
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                     D       D   DD                          
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD             
DO_IUPRED2A:                                                         DDDDDD    DDDDDDDDDDDDDDDDDDDDDDDDD           

                       10        20        30        40        50        60        70        80        90     
AA:            GLGWETTKEQAFLTSGTQFSDAEGLALPQDGLYYLYCLVGYRGRAPPGGGDPQGRSVTLRSSLYRAGGAYGPGTPELLLEGAETVTPVLDPARRQGYGPL 200
BenignSAV:               P          #                                                                              
gnomAD_SAV:      S#   N R  VKN  P   VKR #F H D S F G        H     S* L      #    A                   ALP S G    R  
Conservation:  5528440275885234434423176435347576686268548543444312321243836143414544642032455254555132232032221324
SS_PSIPRED:       EE      HHH   EEE   EEE     EEEEEEEEEEEEE            EEEEEEEEE          EEHEEE         HHH       
SS_SPIDER3:       E      EHE    E E   EEEEE  EEEEEEEEEEEE E           E  EEEEEEEE         HHHH           H         
SS_PSSPRED:             HHHH     EE   EEE     EEEEEEEEEEEEE            EEEEEEEEEE         EEEEE           HHHH     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                     DD                                                   
DO_IUPRED2A:                                                DDDDDDDDDDDDD                  D   DD      DD          

                       10        20        30        40    
AA:            WYTSVGFGGLVQLRRGERVYVNISHPDMVDFARGKTFFGAVMVG 244
gnomAD_SAV:             M R        L  GY N                A
Conservation:  94655648886465143343657858247724685545955645
SS_PSIPRED:      EEEEE EEEE     EEEEEE  HHHEE     EEEEEEE  
SS_SPIDER3:     EEEEEEEEEEEE    EEEEEE  HHH       EEEEEEE  
SS_PSSPRED:     EEEEE  EEEE     EEEEE             EEEEEEE  
DO_DISOPRED3:                                              
DO_SPOTD:                                                  
DO_IUPRED2A:                                               
CARBOHYD:                           N