Q10472  GALT1_HUMAN

Gene name: GALNT1   Description: Polypeptide N-acetylgalactosaminyltransferase 1

Length: 559    GTS: 1.011e-06   GTS percentile: 0.228     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 175      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MRKFAYCKVVLATSLIWVLLDMFLLLYFSECNKCDEKKERGLPAGDVLEPVQKPHEGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPD 100
gnomAD_SAV:       LT       #      V    V    D  R  GEQ       NIV LLH LLDC   R    #FL KE       L       V    NT       
Conservation:  5111123112213432553533446354333223111332131232131212423356342523213332244445546455555732332443334442
STMI:                  MMMMMMMMMMMMMMMMMMMM                                                                        
SS_PSIPRED:      HHHHHHHHHHHHHHHHHHHHHHHHH                                         HHHHHHHHHHHHHH   HHH            
SS_SPIDER3:      HHHHHHHHHHHHHHHHHHHHHHHHHH H                                 EEE  HHHHHHHHHHHHH    HEHH           
SS_PSSPRED:       HHHHHHHHHHHHHHHHHHHHHHHHH       HHH                          EE  HHHHHHHHHHHHHHHHHHHHHHHH        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDD D    DDD   D      DDD                                                           
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                       
DO_IUPRED2A:                                               DDDDDDDDDDDD DDDDDDDDDDD                                
CARBOHYD:                                                                                                    N     

                       10        20        30        40        50        60        70        80        90     
AA:            VRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVS 200
gnomAD_SAV:     #  V    L     R         S    A  #   G  #H S  V            K    T  KT A   E Q    #   #           VL 
Conservation:  3344577354625257244665766566766779943764355541561555766333346773127715622626453537734757779776565536
SS_PSIPRED:       HHHH           EEEEEE  HHHHHHHHHHHHHH   HHHH  EEEEE      HHHHHHHHHHHHHH   EEEEE      HHHHHHH HHH 
SS_SPIDER3:             EE       EEEEEE   HHHHHHHHHHHH     HHH   EEEE      HHHHHHHHHHHHH    EEEE       HHHHHHHHHHH 
SS_PSSPRED:                      EEEEEE   HHHHHHHHHHHHH   HHHHHHHHHE       HHHHHHHHHHHHHH   EEEEE   HHHHHHHHHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                              D                             R              
DISULFID:           C                                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            KGQVITFLDAHCECTVGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDR 300
gnomAD_SAV:    N       Y      M   K V  G  R G #       M G           T C       S HR R AK  VG  T  QA          D  *VNG
Conservation:  2656596676767761995675744530544356997997799669976797759997979797979799779797776777954677566999977667
SS_PSIPRED:       EEEEEE EE       HHHHHHHH     EEEEE  EEE     EE        EE      EEEE  HHHHHH                  EEE H
SS_SPIDER3:       EEEEEE  EE     HHHHHHHHHH        EEEEEE     E       EE EE   EEEEEE  HHHHHH             E    EEE H
SS_PSSPRED:       EEEEEE  EE    HHHHHHHHHHH   EEE   EEEE                    EEEEEE    HHHHHH                   E  H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                 DDDDDD                
METAL:                 D H                                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            DYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRV 400
gnomAD_SAV:         #         *         K  H  RN             W     #   VI H       *          #L    Y    E    #VL  A
Conservation:  2995577599499999999999699955666544565567756766566455466763447355246255535463553666547764366366334152
SS_PSIPRED:    HHHHH             HHHH EEEEEE   EEEEEE   EEEE               HH   HHHHHHHHHHHHHHHHHHH           HHHHH
SS_SPIDER3:    HHHHH   E     EE     EEEEEEE E  EEEEEE   E  E                EHHHHHHHHHHH HHHHHHHHHH           HHHHH
SS_PSSPRED:    HHHHHH             EEEEEEEEEE   EEEEEE    EEE               HHHHHHHHHHHHHHHHHHHHHHHH           HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                      W                              R    Y                                                
METAL:                                                    H                                                        
DISULFID:                                   C        C                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            GLRHKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGGNQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHL 500
BenignSAV:                  D                                                                                      
gnomAD_SAV:            ## F*      L  *  C        Q M MH      S         L   S E     TF     L A E  M       S  LVQ    
Conservation:  1662241425535576456677699557566797475355664554564535543353845455514436434364453346564555356535655545
SS_PSIPRED:    HHHHH        HHH                EEEE     EEE        EEEEEE       EEEEE            EEE      EEEEE    
SS_SPIDER3:    HHHHH         HHHE            EEEEEE     EE E       EEEEEE       EEEEE     E    EEEEE      EEEEE E  
SS_PSSPRED:    HHHHHH    HHHHHHHH              EEEE                 EEEE        EEEEE           EEEE      EEEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:             C                                 C                C                      C              C   

                       10        20        30        40        50        6
AA:            KGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSIRDCNGSRSQQWLLRNVTLPEIF 559
gnomAD_SAV:            NT T       GH   H  A K  R  G  H S  QT   V QKI #R   
Conservation:  46434533311323414216324621211121103221030110132513331410022
SS_PSIPRED:         EEEE    EEEE     EEE          EEEE        EEEEEE HHHH 
SS_SPIDER3:       E EEEE    EEEE     EEEE       EEEEEE      EEEEEEEEEEE   
SS_PSSPRED:        EEEEE    EEEE                  EEE     HHHHHHHHH   HHH 
DO_DISOPRED3:                                                             
DO_SPOTD:                                                                 
DO_IUPRED2A:                            D  D     DDDD                     
DISULFID:                            C                C                   
CARBOHYD:                                                         N