Q10570  CPSF1_HUMAN

Gene name: CPSF1   Description: Cleavage and polyadenylation specificity factor subunit 1

Length: 1443    GTS: 2.433e-06   GTS percentile: 0.790     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1            gnomAD_SAV: 722      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKD 100
gnomAD_SAV:          # RL  AV C #H    S I H  I   S   S C# H  V T P  Y   DENV##   K   F FCL  IL L #   S V Q V  V  R 
Conservation:  3223022221422213122213222022242223222202241111131113122115462467696546265466667444553425225654534333
SS_PSIPRED:     EEEEE       EEEEEEEE       EEEEE   EEEEEEEE  HHHH               EEEEEEEEE  EEEEEEEEE       EEEEEE  
SS_SPIDER3:     E EEEEE     EEEEEEEEE      EEEEE   EEEEEEEE      H             EEEEEEEEE  E EEEEEEEE       EEEEEE  
SS_PSSPRED:      EEEEE      EEEEEEEE       EEEEEE  EEEEEEEE                HHHHHHEEEEEEEEE EEEEEEEEE       EEEEE   
DO_DISOPRED3:  D                                               DDDDDDDDDDDD                                        
DO_SPOTD:                                                    DDDDDDDDDDDDDDD                                       
DO_IUPRED2A:                                                     DDDDDDDDDDD                                       

                       10        20        30        40        50        60        70        80        90     
AA:            AKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKL 200
gnomAD_SAV:    V       NL  QV     M     AQ W R L   QKL* W   N     TFFC  W      #  N    Q   M    K       V  #Q      
Conservation:  4453544434846494474744466564446434443161444371344332353552554495654443633432353633564555557947357777
SS_PSIPRED:      EEEEEE     EEEEEEEEE   HHH            EEE     EEEEEEE  EEEEEEE    HHHH                EEEEHHH   HH
SS_SPIDER3:      EEEEEEE    EEEEEE EE   HHHH          EEEE     EEEEEEE  EEEEEEE    HHHHH               EEEEHHH     
SS_PSSPRED:      EEEEEE      EEEE                      EEE     EEEEEEE  EEEEEE      HHHH               EEEEEHHHHHHH
DO_DISOPRED3:                                                                        DDDD DD                       
DO_SPOTD:                                                                               DD                         
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVAL 300
gnomAD_SAV:    F  #NM    S  #        A       M M     C  V   SVM     I   #        E   M RTV     VVI    S    I     V 
Conservation:  7754754554555597575757945556424445544647977795545575444495135734745457795949977579777577777546934646
SS_PSIPRED:    H EEEEE         EEEEEE          EEEEEEEEEEEE      EE  EEEE                   EEEEE  EEEEE       EEE 
SS_SPIDER3:     EEEEEEEE      EEEEEE          EEEEEEEEEEEEE      E  EEEEE        E EE        EEEE  EEEEE      EEEE 
SS_PSSPRED:    HHHH EE         EEEEE           EEEEEEEEEEEEE       EEEEEE         EE        EEEEEE EEEEEE     EEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKL 400
gnomAD_SAV:    S  AA IA    CA    WNI  RGH   #FH  TD     S  C         #   VL   E#   I AS L  VK E  L V SMSSC H   M E 
Conservation:  4343265446744157345449775663763377775762444467467559777776265464467675464434343644646666967767699993
SS_PSIPRED:                      EEEEEEEEEEEE   EEEEE     EEEEEEEE   EEEEEEEEE        EEEEE    EEEEEE    EEEEEEEE  
SS_SPIDER3:                      EEEEEEEEEEE    EEEEE     EEEEEEEE  EEEEEEEEEEE       EEEEEE   EEEEEEE    EEEEEEEE 
SS_PSSPRED:                      EEEEEEEEEEE    EEEEE     EEEEEEEE   EEEEEEEEE         EEEEE   EEEEEE    EEEEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            QEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEI 500
gnomAD_SAV:     DSLT  LC   N#   L   QGANVM SC PV  L LR      D  SR TPL     S     R #   V H  SVTM  L       H # KL   T
Conservation:  7724230135016246541666614023243332211229549999997593599777674653667759977774374577777575579345577555
SS_PSIPRED:         HHH           HHH                      EEE             EEEEE EE      EEEEEEE      HHH        EE
SS_SPIDER3:        HHHHHHHH                                HE           E  EEEEE         EEEEEEE      HHH        EE
SS_PSSPRED:          HHHH                                                  EEEEEEE      HHH EEEE                 EE
DO_DISOPRED3:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                           DDDDDDDDDD     
DO_SPOTD:            DDDDDDDDDDDDDDDDDDDDDDD DD                                                                    
DO_IUPRED2A:       DDDDDDDDDDDDDDDDDDDDDD                DDDDDDDD                                 D DDDDDDD   DDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            VVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGF 600
gnomAD_SAV:     I PS R  R  L    G Q         L# C V ILMTL #E DGES  VK#  RK NI L  EN SH  R     Q E   S *A   M#       
Conservation:  5446636667464555797979999999759947799954202233120112110312113011126503467997799799977557767646464663
SS_PSIPRED:    EEEE      EEEEE      EEEEEEE     EEEEEEE                                EEEEEEE   EEEEEE   EEEEE    
SS_SPIDER3:    EEEEE    EEEEEE      EEEEEEE    EEEEEEEEEE                             EEEEEEEE   EEEEEE  EEEEE     
SS_PSSPRED:    EEEE      EEEEE      EEEEEEE     EEEEEE                                 EEEEEEE     EEE    EEE      
DO_DISOPRED3:                                              DDDDDDDDDDDDDDDDDDDDDDDD                                
DO_SPOTD:                                                 DDDDDDDDDDDDDDDDDDDDDDDDD                                
DO_IUPRED2A:   DDD                                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD             DD      DD   

                       10        20        30        40        50        60        70        80        90     
AA:            ATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCL 700
gnomAD_SAV:    T   SML    VR  C          C  D   R     M  CT #M G#MVN C  VT V  YI #    R F C HQ C     TL D  TR  M   
Conservation:  4424652246646434676798837377649834355555547354346424665546565593545737624553752477465582341345445663
SS_PSIPRED:         EEEEEEE    EEEEEE   EEEE    EEEEEE      EEEEEE   EEEEEE   EEEEEEEEE     EEEEEEE          EEEEEE
SS_SPIDER3:          EEEEEE   EEEEEEE  EEEEEE    EEEE       EEEEEE   EEEEEE    EEEEEEEE     EEEEEE           EEEEEE
SS_PSSPRED:         EEEEEEE    EEEEEE    EEE    EEEEEE      EEEEEE   EEEEEE   EEEEEEEEE       EEE            EEEEEE
DO_DISOPRED3:                                                                               DDDDDDDDD              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                   DDDD                

                       10        20        30        40        50        60        70        80        90     
AA:            YRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLP 800
gnomAD_SAV:     Q #GDT S   HVDE#H #FASL  A TKDQ#  NN    E   V   GLD F N    A #K  ES   WN   LQT    C    W    T  C   
Conservation:  6884696665644221122400021036141231443227577566649544231220556113220101123102031665464423354523646746
SS_PSIPRED:    EE         HH                              HHHH           HHHHH                   EEEEEEE    EEEEE  
SS_SPIDER3:    EE     HE  HH                             H HHH           HHHHH                   EEEEEEE    EEEEE  
SS_PSSPRED:    E                                                         HHH                     EEEEEEE    EEEEE  
DO_DISOPRED3:            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                       
DO_SPOTD:                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                         
DO_IUPRED2A:                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDD                       
MODRES_P:                                                             S         S                                  

                       10        20        30        40        50        60        70        80        90     
AA:            DWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNIN 900
gnomAD_SAV:    N Q A       M             PI*  PH    MH    LFIQ   V     C   SF   #      MCK LLR P  S D  N C R      I
Conservation:  5747667675554797777777465322343053352255332634443134357242358483334426464556624433226346444554467675
SS_PSIPRED:      EEEEEE       EEEE            HHHHH        HHEEEEEEE        EEEEEE  EEEEEEE           EEEEEEE   EEE
SS_SPIDER3:      EEEEEEE      EEEE           HHHHHHHH       E EEEEEE        EEEEEE  EEEEEEEE          EEEEEEE      
SS_PSSPRED:       EEEEEE     EEEEE           HHHHHH          EEEEEEE        EEEEE   EEEEEEE            EEEEE       
DO_DISOPRED3:                     DDDDDDDDDDDDDDDDDDDDDDD                                      DDD DDDDDDDDDDDDDDDD
DO_SPOTD:                                   DD                                                                     
DO_IUPRED2A:                     DDDDDDDDDDDDDDDDDDDDD                                                             
MOTIF:                                                                                                     KKVPHNIN

                       10        20        30        40        50        60        70        80        90     
AA:            FREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYFNRQGELRISV 1000
gnomAD_SAV:     #  QA LC   T SVST D T TW #MV# #H K  # H E S  SL        SQ   Q  L  V  L N      S    HS    SK D    C 
Conservation:  5964414155442411223512226345477747269446564545654557444625744666773577277774746545644646443446455344
SS_PSIPRED:    E                           EEEEE       EEEEE     EEEEEE    EEEEE      EEEEE          EEEE    EEEEEE
SS_SPIDER3:                                 EEEEE     EEEEEEE    EEEEEE    EEEEE      EEEEEEE        EEEE    EEEEEE
SS_PSSPRED:                               EEEEEEEE      EEEEE    EEEEE     EEEEE       EEE           EEEEE    EEEEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDD                                                                           
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDD                                                                                
MOTIF:         FREKKPKP                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            LPAYLSYDAPWPVRKIPLRCTAHYVAYHVESKVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNARIELQEWEHV 1100
gnomAD_SAV:       C  #  Q      L C M  C V  L     V #IT SML  C  HVI   E  DIMG   Q  Y  HDD#F *  #L    P   T M  K C Q 
Conservation:  4764755557777554767753539355573594653351011525453447454747245443644282242324344544377466437566579764
SS_PSIPRED:                EEEEE      EEEEE    EEEEEEE                HHH            EEEEEEEEE     EEE  EEE      EE
SS_SPIDER3:    E          EEEEEE    EEEEEEE    EEEEEEE              HHHHHHH           EEEEEEEEE    EEE EEE       EE
SS_PSSPRED:    E           EEEE     EEEEEEE    EEEEEEE                              HHH EEEEEE     EEE  EEE    HHHH
DO_DISOPRED3:                                             DDDDDDDDDDDDDDDDDDDDDDDDD                                
DO_SPOTD:                                                         DDDDD                                            
DO_IUPRED2A:                                                D DD     D    DDDD                                     

                       10        20        30        40        50        60        70        80        90     
AA:            TCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASEL 1200
gnomAD_SAV:    #    G  H  G ML F  CM TR   #         Q   T AT      R*       R F        M T    S  V T         R Q R  
Conservation:  7977754757557759377775477954799997977754757577775575467677767477977777777757673737757565577774545459
SS_PSIPRED:    EEEEEEEEE        EEEEEEEEEEE         EEEEEEEEEEE          EEEEEEEE     EEEEEEE  EEEEEE  EEEEEE      
SS_SPIDER3:    EEEEEEEE         EEEEEEEEEE    E     EEEEEEEEEEE          EEEEEEEEEE   EEEEEEE  EEEEEE  EEEEEE    HE
SS_PSSPRED:    HEEEEEEE          EEEEEEE            EEEEEEEEEEE           EEEEEE      HHHHHHH  EEEEEE   EEEE    HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            TGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRA 1300
PathogenicSAV:                                                                           Y                         
gnomAD_SAV:                 H VIIR V  T  I  G L PH  K       MLPN           VA SV  V    GCNH V#A T  L   Q  R  H# HQT
Conservation:  5757955757557552744447555443344349455449799997996443679756793763297336676463652347769574644783555586
SS_PSIPRED:    HHEEEE    EEEEEEEE  EEEEEE    EEEEEEE    EEEEEEE     EEEEEEEEE    EEEEEE     EEEEEE            EEEEE
SS_SPIDER3:    EEE H    E EEEEEEE  EEEEEE    EEEEEEE    EEEEEEE      EEEEEEEE    EEEEEE     EEEEEE           EEEEEE
SS_PSSPRED:    HHHHHH    EEEEEEEHHHHHHHHHHHHHHHHEEE       EEEE      EEEEEEEEE    EEEEEE     EEEE              EEEEH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DFHVGAHVNTFWRTPCRGATEGLSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNVLD 1400
gnomAD_SAV:      Y# TPM MC  AL # TA## R  LIM DT   M   A NSS R    T             # SII   PT  T  VLW#  MYC#       YL  
Conservation:  7644833654666488581162123321143245565576666637348842544356457544332122422243394343244014404433344464
SS_PSIPRED:    EEE      EEEEEE                  EEEEEEE    EEEEEE  HHHHHHHHHHHHHHHHH        HHHHH               EE 
SS_SPIDER3:    EEE    E EEEEEE            E     EEEEEEE    EEEEEE  HHHHHHHHHHHHHHHHH        HHHH                EE 
SS_PSSPRED:    HH       EEEEE                   EEEEEEE    EEEE    HHHHHHHHHHHHHHHHH        HHH                    
DO_DISOPRED3:                     DDDDDDDDDDD                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40   
AA:            GELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRVTAHF 1443
gnomAD_SAV:        S#               M    EV       AECI  P 
Conservation:  5446154555314651335333435333252222311453242
SS_PSIPRED:    HHHHHHHH   HHHHHHHHHHH   HHHHHHHHHHHHHHHH  
SS_SPIDER3:    HHHHHHHH   HHHHHHHHHHH   HHHHHHHHHHHHHHH   
SS_PSSPRED:    HHHHHHHHH  HHHHHHHHHHH   HHHHHHHHHHHHH H   
DO_DISOPRED3:                                             
DO_SPOTD:                                                 
DO_IUPRED2A: