Q12860  CNTN1_HUMAN

Gene name: CNTN1   Description: Contactin-1

Length: 1018    GTS: 1.401e-06   GTS percentile: 0.402     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 9      gnomAD_SAV: 421      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVI 100
gnomAD_SAV:    V     DGQ   M#  PRS   S      Y F   G V   N  G     V       E      #V T   AG N       I    N*HNT R     
Conservation:  2000002222222222222222222222100111102238849646913365434515225352946653835353933541251212254253494937
STMI:          SSSSSSSSSSSSSSSSSSSS                                                                                
SS_PSIPRED:       HHHHHHHHHHHHHHHHHHHHHHHHH             EEEE    EE         EEEEEEE      EEEEEE  EE       EEEE  EEEE
SS_SPIDER3:        HHHHHHHHHHHHHHHHH HHHHHH       H     EEEE    EEE        EEEEEE       EEEEEE  EE      EEEEE  EEEE
SS_PSSPRED:       HHHHHHHHHHHHHHHHHHHHHHHH               EEE               EEEEEEE      EEEEEE           EEE   EEEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDD DD                                                                       
DO_SPOTD:      DDDD                                                                                                
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                      C                                   

                       10        20        30        40        50        60        70        80        90     
AA:            NNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIAN 200
gnomAD_SAV:     H E#   VE         CR I    GS   E   L   #DS  ISI     V    ET     V#   C   SA      T   QLL  K  DV V T
Conservation:  2291103628191938181194538237153985621641525124142581934439167143623436683476592741141737778269887564
SS_PSIPRED:        HHHH EEEEEEEE    EEEEEEEEEEEE            EEEE    EEEE           EEEEEE            EEEE     EEE  
SS_SPIDER3:          HH EEEEEEEE    EEEEEEEEEEEEE          EEEEE   EEEEE           EEEEEE     E E    EEEE     EEEE 
SS_PSSPRED:    E        EEEEEEEEE    EEEEEEEEEEE            EEEE    EEEE           EEEE              EEEE     EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                             D                                                         
DISULFID:                   C                                           C                                          

                       10        20        30        40        50        60        70        80        90     
AA:            VEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI 300
gnomAD_SAV:    I  YN AS P   AG PT   M  #  LF  V  *#     T VI     AH   S S  FD     ST#L# Q*Q F    R   DVT      NV S 
Conservation:  6322918476944542234566593333825123212523262525462342342432426897758494916293823314512222212542916124
SS_PSIPRED:      HHH   EEEEEE     EEEE   EEEEE           EEEE    EEEE    EEEEEE       EEEEEE         EEEE   EEEE   
SS_SPIDER3:    E HHH    EEEEE     EEEE   EEEEE           E EE    EEEE    EEEEEE    E  EEEEEE   E     EEEE   EEEEE  
SS_PSSPRED:            EEEEEEE     EE    EEEEE           EEEEE   EEEE   EEEEEEE        EEEEE         EEEE   EEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                C                                                   C                                     
CARBOHYD:             N                                                 N                                          

                       10        20        30        40        50        60        70        80        90     
AA:            QLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFENAGMYQCIAENTYGAI 400
BenignSAV:      P                                                                                                  
gnomAD_SAV:     PA   #             Y  K           Y D  QA        S  # RQ V A Q F DAD  Q  K  M EM    #RI        N T 
Conservation:  2336472939771615635132325375518383224332324534231627142628080227345502103124341161216676687444614624
SS_PSIPRED:     HHH EEEEEEEEE   EEEEEEEEEEEE  EEEE    EEE     EEEEEEEE     EEEEEE  EE    EEEEE   HHH EEEEEEEEE   EE
SS_SPIDER3:     HHH EEEEEEEE    EEEEEEEEEEE   EEEE    EEE     EEEEEEE      EEEEEE  EEE   EEEEE   HHH EEEEEEEE   EEE
SS_PSSPRED:         EEEEEEEE     EEEEEEEEEE   HHHH            EEEEEEEE     EEEEEE  EE    EEEEE       EEEEEEEEEE  EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:               C                                         C                                      C         
CARBOHYD:                                           N                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            YANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLV 500
BenignSAV:                     I                                                                                   
gnomAD_SAV:     V       V   I  ISTT   T TG   KM T   TE SL LML     R C  SR S  TC      VS    D RDTHIY    I   V NS I  
Conservation:  5556692623248393237554136584463424274847794614385664737185673262148371617462173817585658228654554162
SS_PSIPRED:    EEEEEEEEEE   EEEE      EEEEE   EEE          EEEEEE  EE      EEE     EEE    HHH EEEEEEEE    EEEEEEEEE
SS_SPIDER3:    EEEEEEEEEEE  EEEE     EEEEE   EEEEE         EEEEEE  EEEEE   EEE     EEEE  EHHH EEEEEEEE    EEEEEEEEE
SS_PSSPRED:    EEEEEEHHHH           HHHHHHH  EEEEEE         EEEE   EEEE    EEEE     EEE        EEEEEEEE       EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                  D    
DISULFID:                                         C                                               C                
CARBOHYD:                                                              N               N                    N      

                       10        20        30        40        50        60        70        80        90     
AA:            ITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVV 600
BenignSAV:                                                                                      I                  
gnomAD_SAV:     IA MQ   T TS NV    KT IR  V    TV  A  *   DHA    RD#TRHKT     FS     Q VR  #  K I  TR  ENS    #    
Conservation:  4355938355734435146334162917438425756758334312653211114634102113233714233341648162626663674334151637
SS_PSIPRED:    E    EEEE     EE     EEEEEEEEE     EEEEEEE  EE          EE EEE     EEEE   HHH EEEEEEEE    EEEEEEEEEE
SS_SPIDER3:    E    EEEE    EEEE    EEEEEEEEE     EEEEEEE  EEE        EEEEEE     EEEEEEEEEE  EEEEEEEE     EEEEEEEEE
SS_PSSPRED:    EE   EEE     EEEE   EEEEEEEEEE    EEEEEEEE  EEE                    EEEEE      EEEEEEEEE    EE EEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                  DDDDD
DISULFID:                               C                                                        C                 
CARBOHYD:                          N                                                                     N         

                       10        20        30        40        50        60        70        80        90     
AA:            RGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 700
BenignSAV:                                        T                                                                
gnomAD_SAV:        D   S      G  F  F   #     ISL T A HN ITPP  LN       V      G  TM   S  G   HM V  A   ED  T      
Conservation:  4849767655341132232506185462564567325354252112118613271611645326251724716633637651626346184471560223
SS_PSIPRED:    E        EEEEE    EEEEEEE         EEEEEEEE       EE EE        EEEEEEE      EEEEEEEEEE             EE
SS_SPIDER3:    E        EEEEE EE EEEEEEE          EEEEEEE       EE EEE  EEE  EEEEEEEE      EEEEEEEEE             EE
SS_PSSPRED:    E        EEEEEE   EEEEEEE          EEEEE                       EEEEEE     EEEEEEEEEEE               
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   D DD    DDDDD         D         D                     DDDD DD                          D DDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAV 800
BenignSAV:                                                                               N                      L  
gnomAD_SAV:      D   TM L A   RS        I V  L       S   V           R    I SNS L     K  NSC      I     R    *R  V 
Conservation:  6134273558335285551238535462542435336236783535632310180122532434225562522306133537563346136388352222
SS_PSIPRED:                         EEEEEEEE  HHH      EEEEEEEE      EEEEE       EEEE         EEEEEEEEE          EE
SS_SPIDER3:    E            EEE     EEEEEEEE  HHH      EEEEEEEE      EEEEE      EEEEE      EEEEEEEEEEEE  E      EEE
SS_PSSPRED:                         EEEEE     HHH       EEEEEE       EEEEE       EEEE         EEEEEEEE           EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDDDDDDDDDD DD DD                                DD  DDDD DDDDDDDDD                           

                       10        20        30        40        50        60        70        80        90     
AA:            INSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFT 900
BenignSAV:                            G                                                                            
gnomAD_SAV:    T    G  T    *ID        V AQ KQAS QM    K QH V RE #D EK    I  K LTG KK   N E   DIR  SR    S G VT    
Conservation:  6354433822281150222247333041713301115359664663114242342351423132153533724350813272637268285340111317
SS_PSIPRED:    EE           EEEEEEE   EEEEEE      EEEEEEEEEEE    HH  EEEEEE   EEEEE       EEEEEEEEE           EEEE 
SS_SPIDER3:    EEE           EEEEEE   EEEEEE       E EEEEEEEE        EEEEE     EEEE       EEEEEEEEEE  E      EEEEEE
SS_PSSPRED:    EE            EEEEEE   EEEEEEE      EEEEEEEEE    HHH   EEEEE   EEEEEE      EEEEEEEEE           EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:              DDDD                                        DDDDD                                  DDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            KKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGAPTLSP 1000
BenignSAV:                                 I                                               C                       
gnomAD_SAV:    R  S   AQK T  I    CCV    RAAS       MV      T  R    V     R L  LV K    I  ACT          #    DT  P S
Conservation:  2557823273342221131031516436131055716226545331121113264141321425322121142446642449978233241422221010
SS_PSIPRED:             EEEEE     EEEEEEE            EEEEEEEE      EEEE  EEEEEEE     EEEEEEEEEE        EEEEE       
SS_SPIDER3:             EEEEEEE   EEEEEE E        E EEEEEEEEE      EEE    EEEEEE     EEEEEEEEEE  E     E EEE       
SS_PSSPRED:              EEEEE    EEEEEEE             EEEEEEE             EEEEE      EEEEEEEEE         EEEE        
DO_DISOPRED3:     D                                                                                 DDDDDDDDDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DD    D DDD                              DD           D                   D           D             
LIPID:                                                                                                     S       
CARBOHYD:                                      N                                                                   

                       10        
AA:            SLLGLLLPAFGILVYLEF 1018
gnomAD_SAV:    #  S   L  S H CS L
Conservation:  101022322111102222
SS_PSIPRED:     HHH     EEEEEEEE 
SS_SPIDER3:        E   EEEEEEE   
SS_PSSPRED:        HHHHHHHHHHHHH 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDBB
DO_SPOTD:                        
DO_IUPRED2A: