Q13107  UBP4_HUMAN

Gene name: USP4   Description: Ubiquitin carboxyl-terminal hydrolase 4

Length: 963    GTS: 2.18e-06   GTS percentile: 0.716     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 476      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAEGGGCRERPDAETQKSELGPLMRTTLQRGAQWYLIDSRWFKQWKKYVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPTEA 100
gnomAD_SAV:    #TKCRDFP LLNT #R#Y#FRL #      W **CI   Q  R     L    C TCSAS R P   A#Y  E L G G#  VT Q   D  C SAS KV
Conservation:  2211102222100101100100110101012102554244864688867654354232352112475535433451503152554586455575748364
SS_PSIPRED:                HHHHHHHHHHHHHH      EEEEEEHHHHHHHHHHH                      HHH                  EEEE HHH
SS_SPIDER3:                HHHHHHHHHHHH        EEEEEEHHHHHHHHHHH                      HHH          HH      EEEE HHH
SS_PSSPRED:                HHHHHHHHHHHHHHH     EEEEE HHHHHHHHHHH                                 HHHHH     EEEE HHH
DO_DISOPRED3:  DDDDDDDDDDDDDD                                       DDDDDDDB                                       
DO_SPOTD:      DDDDDDDDD                                                                                           
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDD                                                    D                        

                       10        20        30        40        50        60        70        80        90     
AA:            WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDN 200
gnomAD_SAV:     H PIK    A D  TVIK     DP     I KM  R     D NH#S   G Y  N  S   MG AIQR  S  VDL  W *   I       R    
Conservation:  8247317724233526535494648475836688855568488422222244244895494654664568249284143548554352254555834544
SS_PSIPRED:    HHHHHHHH         EEEE        EEEEEEEEEEEEEE       EEEEEE     HHHHHHHHHHH        EEEEE       EE      
SS_SPIDER3:    HHHHHHH         EEEEEE      EEEEEEEEEEEEEEE       EEEEEE     HHHHHHHHHHH         EEEE      HHHH     
SS_PSSPRED:    HHHHHHHH          EEEEE      EEEEEEHHHHHHH         EEEEE   HHHHHHHHHHHHHH       EEEE      HHHH      
DO_DISOPRED3:                                                                                                D  DDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:                                         VEVYLLELK                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            TVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSKSSTAPSRNFTTSPKSSASPYSSVSASLIANGDSTSTCGMHSSGVSRGGSGFSASYNCQEPPSSHIQPG 300
gnomAD_SAV:      R TE  *D M      Y   A  G  FL     V NG  IA   *  T F   PS VV SV N   Y   R R RSS C S  L DRRG LT RV S 
Conservation:  8465334334335347133276384322121122222222325334231243221232234323423122222222222222322251223211113447
SS_PSIPRED:     HHHH      EEEEEEE         EE                             HH                                        
SS_SPIDER3:      HH       EEEEE       E                                 H                                          
SS_PSSPRED:     HHHH      EEEEEE                                                                                   
DO_DISOPRED3:  DDD                        D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   
DO_SPOTD:                                    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    
DO_IUPRED2A:                    DDDD DDDDDDDDDDDDDDDDDDDDDDDDDD                     DDDDD        DDDD DDD         D

                       10        20        30        40        50        60        70        80        90     
AA:            LCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAF 400
gnomAD_SAV:     S   K      T  S       VA        VH  K  G  #  I  #    CTK   H     ET    L   A#I C GSRL   E E  #   V 
Conservation:  6779677796686686469998436995997263623969139798959769457955479494521356699299779969999999799997799979
SS_PSIPRED:              HHHHHHHHHHH  HHHHHHHH   HHHHH         HHHHHHHHHHHHHHH         HHHHHHHHHH         HHHHHHHHH
SS_SPIDER3:              H  HHHHHHHH  HHHHHHHH    HHHHH         HHHHHHHHHHHHHH         HHHHHHHHHH           HHHHHHH
SS_PSSPRED:               HHHHHHHHHHHHHHHHHHHH HHHHHH          HHHHHHHHHHHHHHH         HHHHHHHHH           HHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                            DDD                                                        
REGION:                                                                                           PQF              
ACT_SITE:                C                                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            LLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHC 500
gnomAD_SAV:         R    Q  EM      Y S WQGVGMV      Y  GS         #    I    D  Q     H L   MVL      *I      S E Y*
Conservation:  7799999979977799963547737937339939793693699697979799999799999939397999999999999999576772677259123610
SS_PSIPRED:    HHHHHHHHHHH                HHHHHHHHHHHHHHHH  HHHHHH  EE  EEE      EEEEE    EEE        EEEEEEEEE     
SS_SPIDER3:    HHHHHHHHHH       EE E     E HHHHHHHHHHHH HH HHHHHHH      EEE      EEEE     EEE        EEEEEEEEE     
SS_PSSPRED:    HHHHHHHHHH                 HHHHHHHHHHHHHHH   EEEE         EE      EEEEE   EEEE         EEEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                                                     C  C                                    
REGION:            LHE                                                   LVCPE                                     

                       10        20        30        40        50        60        70        80        90     
AA:            RPTQYRVTVPLMGAVSDLCEALSRLSGIAAENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASAL 600
gnomAD_SAV:      I  L  MLP R#M#N  K F# P A  T  V  TG  H Q  R SRT K       Q  T M V  N  ANSLQ  M S    K N  S N  P# V 
Conservation:  4327654597449162898169405545336464866786959774721474863943585966764012116415152655578751032133334317
SS_PSIPRED:      EEEEEEEE    HHHHHHHHHHHH   HHHEEEEEE   EEEEE              EEEEEEE         EEEEEEEEEE           HHH
SS_SPIDER3:      EEEEEEEE    HHHHHHHHHHHH   HHH EEEEEE  EEEEE      HHH     EEEEEEE        EEEEEEEEE                
SS_PSSPRED:      EEEEEEE    HHHHHHHHHHHHH      EEEEEE    EEE               EEEEEEE         EEEEEEEEE               
DO_DISOPRED3:                                                                                        DDDDDDDDDDDD  
DO_SPOTD:                                                                                              DDDDDDDDD   
DO_IUPRED2A:                                                                                                DDD    

                       10        20        30        40        50        60        70        80        90     
AA:            YGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKKIKGQ 700
BenignSAV:                        C         C                                                                      
gnomAD_SAV:       L      RY    AC C    GCV HCM#E  RV     H    P S           KD  Q#KD RK P     R K KA  YL D I     A 
Conservation:  6969554565522531508811632452665401011211012010122443342045421567546523442225121215431302211102222200
SS_PSIPRED:         EEE  HHH  HHHHHHHHHHHHHHH                              HHHHHH                            HH    
SS_SPIDER3:         EEE E     HHHHHHHHHHHHHHH                              HHHHHH H                                
SS_PSSPRED:         EEE       HHHHHHHHHHHHHHHH                                                                     
DO_DISOPRED3:                                    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 
DO_IUPRED2A:                                     DDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  
MODRES_P:                                                            S                   S    S                    

                       10        20        30        40        50        60        70        80        90     
AA:            PCPKRLFTFSLVNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCP 800
gnomAD_SAV:       E PLI   L AC IV   # TT EI#  FDAQ   VV      W    H      CKN  T    L T T     K      NA        R    
Conservation:  0222369674348227536332331533255632253554755332523454412343568717225235475324494785599864869965989999
SS_PSIPRED:           EEEEE       HHHHH            EEEE   HHHHHHH    HHHHHHHH               HHHHHHHHH  EE         H
SS_SPIDER3:           EEEEE         HHH    E       EEEE    HHHHHH    HHHHHHH                HHHHHHHH   E          H
SS_PSSPRED:           EEEEE          HHH            EE    HHHHHH   HHHHHHHHHHH              HHHHHHHHH              
DO_DISOPRED3:  DDDD                      D D                                  DDDDDDDDDD                           
DO_SPOTD:                                                                   DDDDDDDDDDDD                           
DO_IUPRED2A:                                                               DDDDD                                   
METAL:                                                                                                           C 
MOTIF:                                                                           QPQKKK                            

                       10        20        30        40        50        60        70        80        90     
AA:            NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDS 900
BenignSAV:                                                  V                                                      
gnomAD_SAV:             EQ  V    E P   F C   #  * V  N  I L F    T K ISY    SC  N V M S HRSI F L A  V  N S   C  EV 
Conservation:  3974996878869996696698898889996754788994384984237256266465141432868676669996895795665566414258646885
SS_PSIPRED:    HHHHHH    EE HHH   EEEEEE        EE      EE       HHHH         EEEEEEEE         EEEEEEEE     EEEEE  
SS_SPIDER3:     H      EEE        EEEEEE         H HH  E E        HHHE        EEEEEEEEE         EEEEEEE     EEEE   
SS_PSSPRED:     HHHHHHHH  EEEE    EEEEEEE      HHHHHHH EEE         HHHH       EEEEEEEE          EEEEE       EE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:          C                                                                                                  
ACT_SITE:                                                                                      H                   

                       10        20        30        40        50        60   
AA:            NVSLASEDQIVTKAAYVLFYQRRDDEFYKTPSLSSSGSSDGGTRPSSSQQGFGDDEACSMDTN 963
gnomAD_SAV:     M     EHT  EV       HQ E  C          AH E #  ICP S   H      AD
Conservation:  687143459665553548675653010000331101211212012222222201141116333
SS_PSIPRED:     EEE  HHH     EEEEEEEE                                         
SS_SPIDER3:     EEE  HHH      EEEEEEE                                         
SS_PSSPRED:          HHH   HHHHEEEEEE                                         
DO_DISOPRED3:                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                 DDDDDDDDDDDDDDDDDDDDDDDDDDDD    D