Q13263  TIF1B_HUMAN

Gene name: TRIM28   Description: Transcription intermediary factor 1-beta

Length: 835    GTS: 6.203e-07   GTS percentile: 0.078     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 332      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAASAAAASAAAASAASGSPGPGEGSAGGEKRSTAPSAAASASASAAASSPAGGGAEALELLEHCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAA 100
gnomAD_SAV:                                S      S       P    L   EV            M                   S #   E  V ST 
Conservation:  4111111111111111111111111111111111111111111111111112122121011311331211111112110111210111101001101000
SS_PSIPRED:        HHHHHHHHHHH                       HH HHH           HHHHHHH      HHH                HHHH  HHHHHHH
SS_SPIDER3:                                                            HHHHH  H HHHH H       E      HH HHH   H     
SS_PSSPRED:       HHHHHHHH                                            HHHHHHHHHHHHHHHH           HHHHHHHHHHHHHHHHH 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                        D
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                       DDD
DO_IUPRED2A:              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D   D                                              
ZN_FING:                                                                       CGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAA
MODRES_P:                        S      S                       S                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            NSSGDGGAAGDGTVVDCPVCKQQCFSKDIVENYFMRDSGSKAATDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQRVKYTKDHTVRSTGPAKS 200
gnomAD_SAV:       V       S  L     E   C R MM SC I N  NR #### N        # DSS #    D           E          N  CI SDR 
Conservation:  1000021111112241876733450135225755334121111011012242655755343556683582856643553454866466564432233311
SS_PSIPRED:                 EEE      EE    HHHH                              EEEE        HHHHHHHH        EEEE      
SS_SPIDER3:                 EEE      EE        HHH      H         E         EEEEE        HHHHHHH         EEEE      
SS_PSSPRED:                 EEE              HHHH    H HHHHH                 EEEE     HHHHHHHHHHHH       EEEE      
DO_DISOPRED3:  DDDDDDDD                                   DD                                                D      
DO_SPOTD:      DDDDDDDDD                                                                                           
DO_IUPRED2A:    DDDDD                                  D                                              DDDDDDDDDDD  
ZN_FING:       NSSGDGGAAGDGTVVDCPVCK                          DANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQRVKYTKDHTVRST     
MODRES_P:                                           S                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            RDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAIL 300
gnomAD_SAV:    W   C#AC II  R #F#       A                      G    #  TL L C  E   A   NA     LMH    I  H E        
Conservation:  2223143253483255923584495265854875228646475366466348533721653343332426513365454145342545354645664557
SS_PSIPRED:                    EEEE      EE    HHH       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:          EE         EEEE     EEE HHE         HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:         EEE        EEEE      HHHH  HHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:   D                                                                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                        D   DDD                        
ZN_FING:          ERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFL                                                       
MODRES_A:                                                                       K                                  

                       10        20        30        40        50        60        70        80        90     
AA:            QIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTK 400
gnomAD_SAV:              H   SE          H                 V C  C       T    F  N  S H #     TM L  SQ D Q     S  I#
Conservation:  2654556546445455277456449439647754555566757755485466525253468655346534865556552853566357448586314856
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHH HHHHHHHHHHHH            EEE   HHHHH
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHH   HHHHHHHHH            EEEE  H HHHH
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHH          EEEE   HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                   D      DDDDDDDDDDDD                                                                 
REGION:                                                                         KLIYF                              
MODRES_A:         K                                   K                                    K                       

                       10        20        30        40        50        60        70        80        90     
AA:            SAEAFGKIVAERPGTNSTGPAPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSGDDPYSSAEPHVSGVKRSRSGEGEVSGLMRKVPRVSLERLDLDLTAD 500
gnomAD_SAV:      G   N    C  AS I SEHVVL   T T #M A     LTDM   CS  T GN    V  Y#     FLP   KLR  #C             FA  
Conservation:  4562462443322301112211012211421222112201111113211211111101201221133122120122112222256826355463455223
SS_PSIPRED:    HHHHH  EEEE                                 HH                                           HHH        
SS_SPIDER3:    HHHH   EEEE                                 H                                                       
SS_PSSPRED:    HHHHH   EEE                                                                                         
DO_DISOPRED3:                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:        D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDD D
MOTIF:                                                                                         LMRKVPRVSLERLD      
MODRES_P:                      S                   S S             S                 S S     S         S        T  

                       10        20        30        40        50        60        70        80        90     
AA:            SQPPVFKVFPGSTTEDYNLIVIERGAAAAATGQPGTAPAGTPGAPPLAGMAIVKEEETEAAIGAPPTATEGPETKPVLMALAEGPGAEGPRLASPSGSTS 600
gnomAD_SAV:       L  R    NI       I  H TVT   SHQ #V V ILS  SM  ##S     AK V   LLITA S  S    #G #   V  R #V  R     
Conservation:  2449366455845346676665846777747533212433232322123122533532414221521222103356334120241410141111532212
SS_PSIPRED:         EEE           EEEE   HH                           HHHHHH                EE                     
SS_SPIDER3:          E            E E    H H                         HHHHHH                E H                     
SS_PSSPRED:                        HHH                             HHHHHHHH                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDD       DDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:      S                                       T                                                    S      

                       10        20        30        40        50        60        70        80        90     
AA:            SGLEVVAPEGTSAPGGGPGTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPAN 700
gnomAD_SAV:    P   L  L SI   #R L  M GR    C  E#L    T  R       N  V S           L   A     K   # G H #  PSMA N  SVK
Conservation:  2334421201011211230111221415344233635325214223472356483422275129253461332200032111111111123231144214
SS_PSIPRED:                              EEEE      EEE                        EEEE                              HHH
SS_SPIDER3:                              EEEEE       E                        EEEEEE                            HHH
SS_PSSPRED:                                EEE                                EEEE                              HHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD                                                    DDDDDDDDDDDDDDDDDDD      
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD                                                     DDDDDDDDDDDDDDD         
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDD                                                           DDDDD                
ZN_FING:                               ATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL                            
MODRES_P:                                                                                        S     S       S   

                       10        20        30        40        50        60        70        80        90     
AA:            QRKCERVLLALFCHEPCRPLHQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQSIIGLQRFFETRMNEAF 800
BenignSAV:                                                                                                  M      
gnomAD_SAV:         H   S #  #  #  RR   EPI Y    S  V     H   R     S     K  R   LV  H    S   VG       H#   MC  D  
Conservation:  7435535583445325336563633145573131132686426644533445536235437517242433344244886233455415424531333136
SS_PSIPRED:    HHHHHHHHHHHH                           HHHHHHHHHHH       HHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHHHHHHHHHHH                           HHHHHHHHH         HHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHHHHH     HHH                  HHHHHHHHHHH       HHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                        DDDDD                                          
MODRES_P:                                                         S  Y S                          S                
MODRES_A:                                                                           K   K    K                     

                       10        20        30     
AA:            GDTKFSAVLVEPPPMSLPGAGLSSQELSGGPGDGP 835
gnomAD_SAV:      N L      LRL T H S   #  P    A SS
Conservation:  43348412312331111211211211312242101
SS_PSIPRED:                                       
SS_SPIDER3:                                       
SS_PSSPRED:                                       
DO_DISOPRED3:         DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:            DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:             D    DDDDDDDDDDDDDDDDDDDD
MODRES_P:                             S