Q13635  PTC1_HUMAN

Gene name: PTCH1   Description: Protein patched homolog 1

Length: 1447    GTS: 1.406e-06   GTS percentile: 0.405     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 28      BenignSAV: 34      gnomAD_SAV: 716      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MASAGNAAEPQDRGGGGSGCIGAPGRPAGGGRRRRTGGLRRAAAPDRDYLHRPSYCDAAFALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGK 100
BenignSAV:                           V             RE                                                              
gnomAD_SAV:                G  S C  L V#AL    RT TW RA H GT RHWYCP QSGFG    T Q    E TI G      #  L KF     #   EHYD 
Conservation:  2222222222222222222222222222222012222222222222222201220122222202111222222133423321321333136312232442
SS_PSIPRED:                                                             HHHHHHHHH        HHHHHHHHHHHHHHHHHHHHHH  HH
SS_SPIDER3:                                                   HH        HHHHHHH          HHHHHHHHHHHHHHHHHHHHHH HHH
SS_PSSPRED:                                                             HHHHHHH         HHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD         DD                                    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                 
DO_IUPRED2A:   DDDDDDDDDD   DDDDDDDDDDDDDDD  DDDDDDDDD   DD                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            FLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLE 200
PathogenicSAV:                                                                           P                     C   
BenignSAV:                                                                          V                              
gnomAD_SAV:       A   M ATL  A   T #D KL D  M#  EQL H     # N    SV SSH     AR   D I  AGV      LV R  H R HV      W 
Conservation:  1221232132334332233153333314222387875389287647496753744947896632232669715661276256428756385774748496
STMI:          MMMMMMMMMMMMMMMMMMMMM                                                                               
SS_PSIPRED:    HHHHHHHHHHHHHHHHHH HH   HHH       HHHHHHHHHHHH         EEEEE           HHHHHHHHHHHHHHH  EEEEE EEEEEE
SS_SPIDER3:    HHHHHHHHHHHHHHHH   EEE   HH EE    HHHHHHHHHHHHH     E EEEEEE E         HHHHHHHHHHHHHHH  EEEE  EEEEEE
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHEEE  HHHEE     HHHHHHHHHHHH          EEEE           HHHHHHHHHHHHHHHHHHEEE   EEEEH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                              N                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            HLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPA 300
PathogenicSAV:                              P                                                                      
gnomAD_SAV:     F   P    A    L#  V  IF      L          E#R      RA  # I  N       F  V#     G          R  TG#L  SSV
Conservation:  4575769445573223232331346554447556643655442822642621124835567226524721122245354466275475568547665260
SS_PSIPRED:                  HHHHHHHHH   EEE                               HHHHHHHHHHH      HHHHHHH                
SS_SPIDER3:      EEE          HHH HH E   E E                               HHHHHHHHHHH      HHHHHHH    HHH         
SS_PSSPRED:    HHHHH         HHHHHHHHH    EE                               HHHHHHHHHHHHHHHHHHHHHHHHH               
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQ 400
PathogenicSAV:                                                                            S                        
BenignSAV:                                                                                                   V     
gnomAD_SAV:    NR   TI LH    T   V        L   GR T       MD# L  NS R INT     V   V  R   K L E       Y      T VV V H
Conservation:  5126804446311122244401625555734244437556554742253113043373858444465553666554454314335495644833685485
SS_PSIPRED:                      HHHHH                 EEEEEE       EEE  EEEEEEE   HHHHHHHH            HHHHHHHHHHHH
SS_SPIDER3:                      HHHHH              HHHEEE EEE      EEE HEEEEEEE   HHHHHHH     EE E    HHHHHHHHHHHH
SS_PSSPRED:                      HHHHH             HHHHEEE             HHHHEEEE     HHHHHHH            HHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:    DDDDDDDDDD                                                                                         
CARBOHYD:                 N                                    N                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            RTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATT 500
PathogenicSAV:                                           G                                            R            
gnomAD_SAV:         M R   SR  I NM C   M   N   Y  N   VHL R   I  TC      H N CR RSSL    I   S           FM     T I 
Conservation:  8253522314431643415448556674754358946733656567775544463566559536666577658535465468566867665544985355
STMI:                                              MMMMMMMMMMMMMMMMMMMMM               MMMMMMMMMMMMMMMMMMMMM       
SS_PSIPRED:    HHHHHHHHHH       EEEEEE  HHHHHHHHH    HHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHHHHHHHHHHH       HH
SS_SPIDER3:    HHHHHHHHHHH       EHEEE   HHHHHHH     HHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHH HHHHHH       HH
SS_PSSPRED:    HHHHHHHHHHH      EEEEHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHHHHH     HHHH
DO_DISOPRED3:                               DD                                                                     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                   N                                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            QVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDL 600
PathogenicSAV: R       #   Y                                                       D                               
BenignSAV:                                                          N                                              
gnomAD_SAV:          T  I          # T     E T  Q G     RH    M  AC NSIA   V S V V V Q       I # L               G 
Conservation:  7466565663556446656747342212223534233727633344344444344245452647485646555427465454656446554786455556
STMI:           MMMMMMMMMMMMMMMMMMMMM                         MMMMMMMMMMMMMMMMMMMMM         MMMMMMMMMMMMMMMMMMMMM  
SS_PSIPRED:     HHHHHHH     HHHHHHHHHHH        HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:     H  EHEEE     EEEEEEEH          HHHHHHHHHH  HHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHH HHHHHHH  H
SS_PSSPRED:    HH  HHHH      EEEEE             HHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            YRREDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQ 700
BenignSAV:                                                                                        K                
gnomAD_SAV:     QHK K     FRV    I TL  D      N YNDIHH  Q HC  DG  Y     VE A#H HM HN  M## C  T  H K FARLI M   S NF 
Conservation:  3864148686657726553257455263321311222211342422334343265585446655463534243335734452426242411221211133
SS_PSIPRED:    HHHHH    EEEEE        EE                              EEEEE    EEE       EEEE                       
SS_SPIDER3:    HHHH     E EE                         E             E EEEE   EEEEEE     EEEEEE                      
SS_PSSPRED:    HHHHHH   EE                                             E                EEEE                       
DO_DISOPRED3:                    DDDDDDDDDDDD               DD                                D      DDDDDDDDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                   DDDDDDD DDDDD                                         D          DDD

                       10        20        30        40        50        60        70        80        90     
AA:            SPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSF 800
PathogenicSAV:                                                   G                          P                      
BenignSAV:      R                N     S               V                                                           
gnomAD_SAV:    IR     I E     CN      DS#RM   PL     L PL              S     F    IIQL    EFMNVI WK   D      Y H   
Conservation:  2213248576853402221012023331283552854134474964322732732463355446967462537771567457557255486366346694
STMI:                                                          MMMMMMMMMMMMMMMMMMMMM                               
SS_PSIPRED:                                   HHHHHHH HHHHH  HHHHHHHHHHHHHHHHHHHHHHH       HHH     HHHHHHHHHHHHHH  
SS_SPIDER3:             HH                   HHHHHHHH HHHHH    HHHHHHHHHHHHHHHHHH   E  E    HH      HHHHHHHHHHHH   
SS_PSSPRED:                                 HHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHH                 HHHHHHHHHHHHHH  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   D                                                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            YNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDIS 900
PathogenicSAV:                                D                                                                    
BenignSAV:                                                                                                 HN      
gnomAD_SAV:        T    V  AHV R   N Y  CG M  IV  K T    T   C     R   G   G    R    #S  S  EN           S HN  VNVG
Conservation:  6444546524474228126326613613323553231023825785443377354514561752261530034354444446445663558213364414
SS_PSIPRED:      EEEEE      HHHHHHHHHHH     HHHHHHHH     HHHHHHHHHHHHHHHHHHHH                     HHH            HH
SS_SPIDER3:      EEEEE     HHHHHHHHHHH      HHHHHH       HHHHHHHHHHHHHHHHHHH      E             E EEEE           HH
SS_PSSPRED:      EEEEE       HHHHHHHHHHH    HHHHHH      HHHHHHHHHHHHHHHHHHH                    HHHHH               
DO_DISOPRED3:                                                                                 DDDDDDDD             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                        D                              
CARBOHYD:                                                                                N                         

                       10        20        30        40        50        60        70        80        90     
AA:            QLTKQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSN 1000
PathogenicSAV:        G                                                                                            
BenignSAV:                                                                                      Q                  
gnomAD_SAV:        KH   T  V       V  M   G NRIVF   E SFW R# Q   G TN I  #    L T   K   L  H SS Q  L   KTVG    V   
Conservation:  5722337541284525128735674666588674757445428345463552342433423346254665646565684555263695859647936915
SS_PSIPRED:    H              HHHHHHHHHHHHH  HHHHH                                 EEEEEEEEEE     HHHHHHHHHHHHHHHHH
SS_SPIDER3:    H    EEE     E HHHHHHHHHHHH    HHHH      EE    EE    H              EEEEEEEEEEE    HHHHHHHHHHHHHHHHH
SS_PSSPRED:                   HHHHHHHHHH       HHHH                      HHH        EEEEEEEEE     HHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                          D D                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                                         N

                       10        20        30        40        50        60        70        80        90     
AA:            YTSLGLSSYPNGYPFLFWEQYIGLRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHV 1100
PathogenicSAV:                                                    M                R                      K        
BenignSAV:                                                                        L                                
gnomAD_SAV:     MN R  I   S  IF   R LSVHR       M       M #  I  L M   V    #  MG  # VV  V V  NVM MA   T L M     # I
Conservation:  4222740489563854888884466546754555484658669546754753634593463446397684775647766666767864679985566654
STMI:                                     MMMMMMMMMMMMMMMMMMMMM       MMMMMMMMMMMMMMMMMMMMM       MMMMMMMMMMMMMMMMM
SS_PSIPRED:    HHH              HHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHH     HH HHHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHH             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHH H HHHHHHHH
SS_PSSPRED:    HH               HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHH   E HHHHHHHHHHH EEEEHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEP 1200
PathogenicSAV:              W                 #              S        R          R                                 
BenignSAV:                    M                                              S                               S     
gnomAD_SAV:         M  S  SC VE       VLI   TM         V    N VIG   T   M SV SI S Q        V E H       S  C  S     
Conservation:  3435624173221632044543548536454643674546465356773468836744954884668947894585227744521212211223141334
STMI:          MMMM                 MMMMMMMMMMMMMMMMMMMM             MMMMMMMMMMMMMMMMMMMMM                         
SS_PSIPRED:    HHHHHHH   HHHHHHHHHHH HHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                      
SS_SPIDER3:    HHHHHH    HHHHHHHHHHH HHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHH HHHHHHHH                       
SS_PSSPRED:    HHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                      
DO_DISOPRED3:                                                                                      DDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                          DDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                          DDDDDDDDDDDDD
MODRES_P:                                                                                                    T S   

                       10        20        30        40        50        60        70        80        90     
AA:            PPSVVRFAMPPGHTHSGSDSSDSEYSSQTTVSGLSEELRHYEAQQGAGGPAHQVIVEATENPVFAHSTVVHPESRHHPPSNPRQQPHLDSGSLPPGRQGQ 1300
BenignSAV:                S M                A                        M                       L L                  
gnomAD_SAV:     R   C #LLSSLM  ECHC  L  G  M A    K  P  K  R T RSDDRETL T    I TY   A #K   R LW L  KH     F L RQ DL
Conservation:  4222222213311111222143221222421233522123220011121111131122202312201223211012222021010110100001010101
SS_PSIPRED:                                       HHH              EEEEE                                           
SS_SPIDER3:                                                        EEEEE        E                                  
SS_PSSPRED:                                                         EEEE                                           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            QPRRDPPREGLWPPPYRPRRDAFEISTEGHSGPSNRARWGPRGARSHNPRNPASTAMGSSVPGYCQPITTVTASASVTVAVHPPPVPGPGRNPRGGLCPG 1400
BenignSAV:       C          SL                                  W                                                  
gnomAD_SAV:     SLSY #S VFC LLCGLH      FA   C SG   HRC#CRSG QSLWD V A V N LLR Y   S  MT # M  TL LLLILRSRW  QWE YLD
Conservation:  1012222200000211023221221221022221120112221011221114212202211221234444443444223331331222211010221120
SS_PSIPRED:                                                                       EEEEEE    EEE                    
SS_SPIDER3:                                                                          E    EEEEE                    
SS_PSSPRED:                                                                        EEE      EEEE                   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   D        D DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                       
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40       
AA:            YPETDHGLFEDPHVPFHVRCERRDSKVEVIELQDVECEERPRGSSSN 1447
PathogenicSAV:                                      D         
BenignSAV:        A                                     #     
gnomAD_SAV:       A QS   #LYM LNIQ  G  L LD TK RNM  K  #Q NN  
Conservation:  22222210212110220000111010010435443310110022220
SS_PSIPRED:                             EEEEEEEE HHEEE        
SS_SPIDER3:                              EEEEE EE  E          
SS_PSSPRED:                              EEEEEEE              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                            DDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDD  D    DDDDDDDDDDDDDDDDDDD