Q14055  CO9A2_HUMAN

Gene name: COL9A2   Description: Collagen alpha-2(IX) chain

Length: 689    GTS: 2.193e-06   GTS percentile: 0.720     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 2      BenignSAV: 22      gnomAD_SAV: 363      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGV 100
BenignSAV:               F                  R Q                             L              A                       
gnomAD_SAV:    VDTT  F H F  I   L#  V L  R LR Q    LQ  LR    NR  S          L  R K  E  SV  AR  E         *    E   D
Conservation:  2220100022001021122111210154343452265456432443241344481363273141464651263473263363586263584383082682
STMI:          SSSSSSSSSSSSSSSSSSSSSSS                                                                             
SS_PSIPRED:       EE  HHHHHHHH                                                                                     
SS_SPIDER3:           HHHHHH                                                                                       
SS_PSSPRED:    HHH      HHHHHHHHHHHHH                                                                              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDD  DD DD    D                  DDDDDDDDDDDDDDDDDDDDDDDDD               DDDDDDDDBDBBD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDD             DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            KGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPPGMKGPPGLQGVKGHAGKRGI 200
BenignSAV:                                                                                      V     M            
gnomAD_SAV:     #  R   S DRLSA  #  T S AT     DF V*  R   ET  QL S  LS# H #  SFH P   VE PR A    RI S#R M  M  YVS #R 
Conservation:  5654742532713846438538248349388548128358217208219258548459438141448888753443357352464478385684384281
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  BBDBBBBBDDDDDDDDDDDDD DDD     BBBBBBBBBBDDDDDD      D  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:                                                                       QGLEGSADFLCPTNCPP                    
DISULFID:                                                                               C   C                      
CARBOHYD:                                                                          S             K                 

                       10        20        30        40        50        60        70        80        90     
AA:            LGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT 300
BenignSAV:                                                  M                                                      
gnomAD_SAV:         Q RNL    G       S    L S S         S E M TQA  S MS #S    L#  D   LR *  K   AS SS C   E# AL   M
Conservation:  5744813721812841825843947943691524636722844732731533740824813923533742834712724531822722833611734711
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDD  DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPG 400
PathogenicSAV:                          W                                                                          
BenignSAV:      L      E                R R      VE                                               L                
gnomAD_SAV:    VL S  S E    M    S    V R R  D#  VVAA V R  Q    G V L#L      CASS    G  L* K  TR VI   C# S    L    
Conservation:  7255345544254256358117328156045348148458256237337148437159115016266116647348428628529144538458337237
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDD  DDDD          DDDDDDDD  D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGL 500
BenignSAV:                 S                                                                                       
gnomAD_SAV:    L     TN  KASR      V   I AH   A        L     #   R    R     L    R   PEKL#*S#  E T TR I   TS#      
Conservation:  1251151583694353994684392492352283261462184455365142363361353442356365183152362262340461152153573562
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            AGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR 600
PathogenicSAV:                                                                                            S        
BenignSAV:                                                                                     I   L        M      
gnomAD_SAV:    T D#D    S  E   DL  I#K  M              TM  T#K  SV  I        #   Q    ##    AQDF   M  M  #  S  E  C
Conservation:  1724823504621502534334585535444535949454679658534842934948835835814803632912835935832641645943844834
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                HHH  HHHHHHHHH                                                          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                            D            DDD DDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:                           ATDQHIVDVALKMLQEQLAEVAVSAKREAL                                                   

                       10        20        30        40        50        60        70        80        9
AA:            GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARLTEPGSIKGP 689
BenignSAV:                                                                 T                 H       E  
gnomAD_SAV:    R       G#WR  R   SS       W V   KS    * YT    A  QL P   # VTS  Q# T    LTS P H   RRY E L
Conservation:  81353253043542513535633442813713147418545146125224153035304242342243224231213132215321354
SS_PSIPRED:                                                                              HHH            
SS_SPIDER3:                                                                                             
SS_PSSPRED:                                                                             HHHHH           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD         DDDDDDDDDDDDDDDD
REGION:                                        INGKDGDRGSPGAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARLTEPGSIKGP