Q14108  SCRB2_HUMAN

Gene name: SCARB2   Description: Lysosome membrane protein 2

Length: 478    GTS: 1.45e-06   GTS percentile: 0.425     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 2      BenignSAV: 6      gnomAD_SAV: 198      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGRCCFYTAGTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTNPEEILRGETPRVEEVGPYTYRELRNKANI 100
gnomAD_SAV:        RY M    FV    A       Q LPN I ER     M  S   T  F KN A  #H  LF L      KF    PLW    R    WKF      
Conservation:  1110000001111011000122100101210010001001214141312511821362445333545442820233181160605177735541406036
STMI:              MMMMMMMMMMMMMMMMMMMMMMM                                                                         
SS_PSIPRED:      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH        HHHHH       EEEEEEEEE   HHHHH      EEEE  EEEEEEEEEEEE
SS_SPIDER3:      HHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHH       HHHHH        EEEEEEEE   HHHHH      EEEE  EEEEEEEEEE E
SS_PSSPRED:      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE     HHHHH       EEEEEEEEE   HHHHHH     EEEE   EEEEEE     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDD                                                                           
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_IUPRED2A:                                                                                D D                    
CARBOHYD:                                                  N                      N                                

                       10        20        30        40        50        60        70        80        90     
AA:            QFGDNGTTISAVSNKAYVFERDQSVGDPKIDLIRTLNIPVLTVIEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSLIHVFRPDISPYFG 200
BenignSAV:                         Q                                     V                                  N      
gnomAD_SAV:            V    #  C C QV A RYS V       V  W  L  FKM     V   V   C    L  YI  K    CQG  W   Y    N ASC  
Conservation:  1502623363413031416132370811215053345452333402220011102321141212212712347244699725154114301032212079
SS_PSIPRED:    EE     EEEEEE  EEEE            EEE   HHHHHHHHH  HHHHHHHHHHHHHH     EEEEEHHHHHH    HHHHHHHHH         
SS_SPIDER3:    EE     EEEEEEEEEEEE            EEEE  HHHHHHHHHH HHHHHHHHHHHHHH     EEEEEHHHHH     HHHHHHHHH       HH
SS_PSSPRED:           EEEEEE EEEEE            EEEE    HHHHHHHHHHHHHHHHHHHHHHHH    EEE  HHHHHH    HHHHHHHHH         
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:          N                                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            LFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAE 300
gnomAD_SAV:     SHG  E             N F    V      M V *   HR    S            #H L  I   E    MC #   CG L#E    # EAS  
Conservation:  5512182624526343791143133226117441214237161148372663822646342323051464463768413061111031453255723701
SS_PSIPRED:    HHHHH       EEEEE    HHH EEEEEE                EE               EEEEE    EEEEEEEEEEEEEE  EEEEEEE  HH
SS_SPIDER3:    HHHHE     EEEEEEE    H  EE EEEE  EE            EE     EE        EEEEE     EEEEEEEEEEEEE  EEEEEEE  HH
SS_PSSPRED:     EEE        EEEE     HHH  EEEEE                                 EEEEEE   EEEEEEEEEEEEEE  EEEEEEE  HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                               C                          
CARBOHYD:           N                 N                        N                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            ILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGD 400
PathogenicSAV:                                                               N                                     
BenignSAV:                                                                                                    I M  
gnomAD_SAV:     #VSM A DS  MSD  F  P          S    T LS  C   KK F  V  T     #NK S  V S   V I V R  *     E   N I M  
Conservation:  3644022726783513182137544341831336344828874354114222507518112163533543624834433346363633221301401631
SS_PSIPRED:    HHH                    EE         EEEE HHHH   HHHHHH       HHH  EEEEEE     EEEEEEEEEEEEEEEE    EE   
SS_SPIDER3:    HH         E          EEE E       EEEE HHH    HHHHH        HHH EEEEEE      EEEEEEEEEEEEEEEE   EEE   
SS_PSSPRED:    HH                     EE         EEE         HHHHHH       HHH  EEEEE      HHHHHHHHEEEEEEE          
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                 C     C          C                                                                       
CARBOHYD:         N                    N                                                                           

                       10        20        30        40        50        60        70        
AA:            IRTMVFPVMYLNESVHIDKETASRLKSMINTTLIITNIPYIIMALGVFFGLVFTWLACKGQGSMDEGTADERAPLIRT 478
gnomAD_SAV:      IVF    # S  A V  KMV Q   V     M A #L  TTVM A  D F I  S R# E V  E V V  L  * 
Conservation:  421334843552633045212301331131110440224413343622212222120110110001031021122300
STMI:                                           MMMMMMMMMMMMMMMMMMMMMMMMMM                   
SS_PSIPRED:        EEEEEEEEEEEE  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH         HHH       
SS_SPIDER3:        EEEEEEEEEEEE  HHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHH           HHH       
SS_PSSPRED:        EEEEEEEEEEEE  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH          HHH      
DO_DISOPRED3:                                             DD         DDDDDD DDDDDDDDDDDDDDDDD
DO_SPOTD:                                                               DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                 
CARBOHYD:                 N                 N