Q14162  SREC_HUMAN

Gene name: SCARF1   Description: Scavenger receptor class F member 1

Length: 830    GTS: 1.124e-06   GTS percentile: 0.278     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 7      gnomAD_SAV: 386      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGLGLLLPLLLLWTRGTQGSELDPKGQHVCVASSPSAELQCCAGWRQKDQECTIPICEGPDACQKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCR 100
gnomAD_SAV:       E   L   ICAQ   # KV S R   RMVT SP D    T GK* A     S S VL   E #KLG NLA R*       S #  C           
Conservation:  0000000000000000000002110100000000130111452552313024225442512261126465273354634754531414246124655553
STMI:          SSSSSSSSSSSSSSSSSSS                                                                                 
SS_PSIPRED:          HHH                     EE             EE                           EEE                EE     
SS_SPIDER3:         HH                      E        E     E E     E              EE    EEE                  E     
SS_PSSPRED:           H H                 EE        EEE                                  EE                        
DO_DISOPRED3:  D                   D                                                                               
DO_SPOTD:      D                                                                                                   
DO_IUPRED2A:                                                                                                       
DISULFID:                                                              C     C     C     C C        C            C 

                       10        20        30        40        50        60        70        80        90     
AA:            ESCPCHPHGQCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNCHGSP 200
gnomAD_SAV:                                                                               S                        
Conservation:  3160656372732147162612245711631180701341522116151621324221713172711012173212514150152352281117172053
SS_PSIPRED:                    EEE                           EEE    EE                      EEE    EE              
SS_SPIDER3:             EE     EE     EE              EE     EEE                     EE      E     E       EE      
SS_PSSPRED:                     EE                            EE                                                   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:          C     C      C C        C                             C     C      C      C C        C          

                       10        20        30        40        50        60        70        80        90     
AA:            CEQDSGRCACRPGWWGPECQQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWNGTQCQQPCLPG 300
gnomAD_SAV:         S    W   SD          Q              A                      R C  Y  SW R ASN  F KL   RI   P Y  D
Conservation:  5130351516112246216210617035182113616250452240162224000148000003661541131622127161362287775382227217
SS_PSIPRED:           EE    EE   HH        EE     EEE                                                              
SS_SPIDER3:    E     EE     E    H  E   E  EE     EEE                  E   HH                 E   E   E            
SS_PSSPRED:                                        EE                                                              
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                        C     C    C      C C        C                                                    
CARBOHYD:                                                                                              N           

                       10        20        30        40        50        60        70        80        90     
AA:            TFGESCEQQCPHCRHGEACEPDTGHCQRCDPGWLGPRCEDPCPTGTFGEDCGSTCPTCVQGSCDTVTGDCVCSAGYWGPSCNASCPAGFHGNNCSVPCEC 400
gnomAD_SAV:    S SK  K R L# # ED   S I    H AL L    Y     I  S   #  N          I#I# Y  # C#C    KTF RPSY  S    T   
Conservation:  3592191214518202219321280812755942515620262043684271219217116054114715371273251354058212247156202618
SS_PSIPRED:                                                                        EEE                             
SS_SPIDER3:     E                      EE E                  E   H          EE     EEE                          E  
SS_PSSPRED:                                                                         EE                             
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:           C      C     C      C  C        C                C  C    C      C C        C                   
CARBOHYD:                                                                                       N          N       

                       10        20        30        40        50        60        70        80        90     
AA:            PEGLCHPVSGSCQPGSGSRDTALIAGSLVPLLLLFLGLACCACCCWAPRSDLKDRPARDGATVSRMKLQVWGTLTSLGSTLPCRSLSSHKLPWVTVSHHD 500
BenignSAV:                             V                                                                           
gnomAD_SAV:         R I  Y  S  D #     V R     P     G   SW * ##       V GRVPMC    *        D M   H   C   L   I  QN
Conservation:  1120522125050201111022222335313244342323423231000000221102111022235223122432433245524123244848454454
STMI:                               MMMMMMMMMMMMMMMMMMMMM                                                          
SS_PSIPRED:              EEE        HHHH     HHHHHHHHH                                                        EE   
SS_SPIDER3:        E     EEE                   HHHHHH                 E        E    E                        EE    
SS_PSSPRED:                                  HH HHHHHH                                                             
DO_DISOPRED3:                                            DDDDDDDDDDDDD                               D             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                          DDDDD                                        

                       10        20        30        40        50        60        70        80        90     
AA:            PEVPFNHSFIEPPSAGWATDDSFSSDPESGEADEVPAYCVPPQEGMVPVAQAGSSEASLAAGAFPPPEDASTPFAIPRTSSLARAKRPSVSFAEGTKFAP 600
gnomAD_SAV:    LAIR    L KSRP S   N C L N      # I T     *    H   E#L K    T S LTL NT#MT #ML#  N PQ  W L   VQ IE T 
Conservation:  2512334445424723705336404424101403232333511202121000111020100000020300112002223320003214103222222332
SS_PSIPRED:                                                    HHH    HHHH                       HHH               
SS_SPIDER3:                            E      E     E                   H          H            HHHH               
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:                 D   DDDDDD DDDD   DDD   DDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                    DD DDDDDDDDDDDDDDDDDDDDD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:       DD           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                                                              S           

                       10        20        30        40        50        60        70        80        90     
AA:            QSRRSSGELSSPLRKPKRLSRGAQSGPEGREAEESTGPEEAEAPESFPAAASPGDSATGHRRPPLGGRTVAEHVEAIEGSVQESSGPVTTIYMLAGKPRG 700
BenignSAV:                      K                    D                      W    S                                 
gnomAD_SAV:      C# *RG  RL *  TKP Q S LSLD W VKK#K  DK A#SKP LVP  ARN   D QQ    CWI    M V  D IHKIL    AN   VRESHV
Conservation:  2122222221121143012222312111101000001110000011110111211222100000012101211111001100010020232201321221
SS_PSIPRED:                                         HHH                              HHH                  EE       
SS_SPIDER3:                                                                           H  HH            EE E        
SS_PSSPRED:                                                                                             EEEE       
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:           S                                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            SEGPVRSVFRHFGSFQKGQAEAKVKRAIPKPPRQALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTESSRRAQEPVSGCGSP 800
BenignSAV:                                                    V                                                    
gnomAD_SAV:     K  AL   CY #T   # V VNF  TML  LH G  WE   S V #V  C   TLPSEG  R VI  VV  AQ V Q      KNLGGSH LA  Y FA
Conservation:  1261222343234222111111102121123212120001201001111111120100000011000000011120000010101021011100000000
SS_PSIPRED:          HHHHH       HHHHHHH                                               HHHHH                       
SS_SPIDER3:            HHH     H  HHHHH                                                 HHHH                       
SS_PSSPRED:                        HHHH       HHHH                                      HHH                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30
AA:            EQDPQKQAEEERQEEPEYENVVPISRPPEP 830
BenignSAV:                         A         
gnomAD_SAV:       S*E*  D K   #    A      L# 
Conservation:  000000010000000000000000000000
SS_PSIPRED:       HHHHHHHHH                  
SS_SPIDER3:       HHHHHHHH           E       
SS_PSSPRED:           HHHHH                  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD