Q14993  COJA1_HUMAN

Gene name: COL19A1   Description: Collagen alpha-1(XIX) chain

Length: 1142    GTS: 1.567e-06   GTS percentile: 0.477     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 619      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MRLTGPWKLWLWMSIFLLPASTSVTVRDKTEESCPILRIEGHQLTYDNINKLEVSGFDLGDSFSLRRAFCESDKTCFKLGSALLIRDTIKIFPKGLPEEY 100
gnomAD_SAV:    TG      I # # V  I     #II N#I D   V  K  Y   *      Q      E#  C  C       I Y  RN   TK   Q    R  K  
Conservation:  7100112013111101122010141202111015616212101200001001122646533183453233122113466642443524025881865276
STMI:          SSSSSSSSSSSSSSSSSSSSSSS                                                                             
SS_PSIPRED:        HHHHHHHHHHHHHHHHHHHHH           EEEE            EE            HH       EEEE   EEEEEHHHH         
SS_SPIDER3:          HHHHHHHHHHHHHHHH EEEE         EEEE  E EE     EEEE E         E       EEEEE   EEEEEHHHH         
SS_PSSPRED:          HHHHHHHHHHHHHHHEEEE             E                                   EEEEE  EEEEEEHHHH      HHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDD D                                                                      
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDD                                                                           
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGKKVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDCNLIARRQTDEK 200
gnomAD_SAV:     I    # QTKTR  #    RI   LD    #VI   E  A    LEV GR    C    Q  HA   CR*  FC IM#  AV*I VA  V E  KAVQ 
Conservation:  5324348665345657944644352130463543699267359422131122142449656664178897786754454311655739926452414225
SS_PSIPRED:    EEEEEEEE        EEEEEEE     EEEEEEE    EEEEEEEE        EE             EEEEEEEE   EEEEEE   EEE       
SS_SPIDER3:    EEEEEEEE        EEEEEEE     EEEEEEE     EEEEEE       EEHE              EEEEEEE  EEEEEEEE     E      
SS_PSSPRED:    HHHHEEEE        EEEEEEE      EEEEEE     EEEEEEE                         EEEEEE   EEEEEE             
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                   DDDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DTVDFHGRTVIATRASDGKPVDIELHQLKIYCSANLIAQETCCEISDTKCPEQDGFGNIASSWVTAHASKMSSYLPAKQELKDQCQCIPNKGEAGLPGAP 300
gnomAD_SAV:    G# N R W    MQT G  R G #       *N  HLP  KY    Y  FL     E #  **II R   KP *  G  Q  E*Y*GV SE QTR   PL
Conservation:  0125219333745731734676784334155952124123298421211730111102343332223343221243101120319291218442614511
SS_PSIPRED:            EEE EE           EEEEEE    HHHHHHH                     EE                                   
SS_SPIDER3:           EEEEE         E  HHHEEEE       EEE                      E                                    
SS_PSSPRED:            EEEE             HHH      HHHHHHH                                                           
DO_DISOPRED3:                                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDD        DDDDDDDDDDD         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                               D            D D        DDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSLGIQGPQG 400
BenignSAV:                                                        G                                                
gnomAD_SAV:      TE  RQ   Q G R   PLR #  NE   C   # DI     E   *  G #    QY#       # # D  E   G E  EQ    V VRV S  S
Conservation:  3126126136318207008136137247317118129209558318118117204125035239319219228467459619457232523213136226
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGGYYNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVI 500
BenignSAV:          E                                                                                         G    
gnomAD_SAV:    LAE #DR#  Q R R RR R #TE S SSR R L  I D HCK G      #  R  N NND    SEI        R EVTR A ANEK EH EG  AV
Conservation:  3593353544241271462253253252242141101412221241111110220111315940812522801614355531333613524542841700
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSLPGEPGLDGNPGAPG 600
gnomAD_SAV:       E E    Y R#L      #  C #    F   T LRE A   R R #L    TRAQN  LR #  T R Q    K  R      E QR   T  T  
Conservation:  9238169418318448117146128228329328446146418228219148156178476436421654836846862825303113023411144259
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPRGLPGLPGTPGTPGNDGVPGRDGKPGLPGPPGDPIALPLLGDIGALLKNFCGNCQ 700
gnomAD_SAV:     H  RDK  FT   S  RNT    # N V   T RQ   L VR TQ  L#F  S  #  KE I RS#     SC S  L   SF R  S FFR V C   
Conservation:  5998999994895592496293591631923932831823814846743933724814812735733947947896854389533453432444382154
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD            D 

                       10        20        30        40        50        60        70        80        90     
AA:            ASVPGLKSNKGEEGGAGEPGKYDSMARKGDIGPRGPPGIPGREGPKGSKGERGYPGIPGEKGDEGLQGIPGIPGAPGPTGPPGLMGRTGHPGPTGAKGEK 800
gnomAD_SAV:    T     *ISR K  SSD #  HV TDWTVYR SQ S R   KD    N  QQD H        KV H   S  D   L  R S  RG RR VAART    
Conservation:  1134523214653310813611321314452923751627546646818886955821865854711823723812621722811843721630514743
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GSDGPPGKPGPPGPPGIPFNERNGMSSLYKIKGGVNVPSYPGPPGPPGPKGDPGPVGEPGAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGV 900
gnomAD_SAV:      # H   SR  E  V    VQ SINT      D   #      R   TTRY      #          L      Q    S   S  L  T  L##   
Conservation:  9238328249397756232355355425443635321131553562344434141234252566685885581796192292492392285282492392
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PGEPGERGPVGDIGFPGPEGPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGSQGERGKPGLTGMKGAIGPMGPPGNKGSMGSPGHQGPP 1000
gnomAD_SAV:    S GLC   AF HT    Q   T NA     V    V  TI  A V  A   #     L N  LH  Q    IK V  T   TCTQES  P ET  RE   
Conservation:  9983939963953946766852925726757738923811952979949977673786835839876862931901723841943805821918912824
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MOTIF:                                                            RGD                                              

                       10        20        30        40        50        60        70        80        90     
AA:            GSPGIPGIPADAVSFEEIKKYINQEVLRIFEERMAVFLSQLKLPAAMLAAQAYGRPGPPGKDGLPGPPGDPGPQGYRGQKGERGEPGIGLPGSPGLPGTS 1100
gnomAD_SAV:     C   H FA#NS  #  M#TC       L K    L  A   M  TT   P  ASTE  E E FLR   N E RSCG       * EVRP # T  S   
Conservation:  3068123222501222655044328534533233301223242553466341594794893795895682686684685886665393965924833933
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                  H HH        HHH HHHH                                                                  
SS_PSSPRED:                                                 HHHHHH                                                 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDD                        D     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40  
AA:            ALGLPGSPGAPGPQGPPGPSGRCNPEDCLYPVSHAHQRTGGN 1142
gnomAD_SAV:    D  F  L DTSSLRCT E R K  A   FC#   D  H SE#
Conservation:  512128246238226438116383514523212120111231
SS_PSIPRED:                                              
SS_SPIDER3:                                              
SS_PSSPRED:                                              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD