Q15029  U5S1_HUMAN

Gene name: EFTUD2   Description: 116 kDa U5 small nuclear ribonucleoprotein component

Length: 972    GTS: 1.126e-06   GTS percentile: 0.280     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 10      BenignSAV: 6      gnomAD_SAV: 293      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTK 100
BenignSAV:                                                 I  P                                                    
gnomAD_SAV:     EIN    L      D   N NN   #S#  Y N V  HG# N IV PEN  RELG    K N    S K M DLD  SM     SHS    V#  A  N
Conservation:  7233777557223475555544434212102212304543577204517541295555754343455455547755554444555447757999999715
SS_PSIPRED:                                                                        HHHHH    EEEEE                EE
SS_SPIDER3:                E                                           E       E   HHHH     EEEEE           E    E 
SS_PSSPRED:                                                                        HHHH     EEEEE                 E
DO_DISOPRED3:  DDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                   DDDDDDDDDDDDDDDDDDD 
DO_SPOTD:      DDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                             
DO_IUPRED2A:   DD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   D DDDDDDDDDDDDDDDDDDDDDDDDDD       
MODRES_P:                        S                                                                  T              

                       10        20        30        40        50        60        70        80        90     
AA:            KFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLF 200
PathogenicSAV:                                         D                                      V                    
gnomAD_SAV:    E  R       ML DL   V    D              Y R       M    L    C E   R A VFLA       MR I       H     S  
Conservation:  5945577277074745457557774557577557577957977474554799997457774707557775575777554447545442465557577575
SS_PSIPRED:    EEEEE          HHHHHHHH  HHH EEEEEEE     HHHHHHHHHHHH HHHHHH          HHHHHHH  EEE   EEEE       EEEE
SS_SPIDER3:     EEEE E        HHHHHHHH     EEEEEEE      HHHHHHHHHHHH H HH             HHHHH   EEEE EEEEEEE     EEEE
SS_PSSPRED:    EEEEEE     EEE HHHHHHHHH      EEEEEE     HHHHHHHHHHHH HHHHHH           HHHHHH   EEE  EEEE       EEEE
DO_DISOPRED3:                                                                              D DDD                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                                          GHLHHGKT                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            NIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL 300
PathogenicSAV:        R                                                     W                                      
gnomAD_SAV:    SVV I    H F     SSL    M   V         A QQM #VL     I       V          A   C  C T       M T  A     #
Conservation:  9779999454777434733544443444475447955579779799574354547579979777399977757799555957777955753455454425
SS_PSIPRED:    EEE         HHHHHHHHH  EEEEEEE      HHHHHHHHHHHH    EEEEEE HHHHHH     HHHHHHHHHHHHHHHHHHHHH      EEE
SS_SPIDER3:    EEE        HHHHHHHHH    EEEEEE      HHHHHHHHHHHH    EEEEE  HHHHHH     HHHHHHHHHHHHHHHHHHHH       EEE
SS_PSSPRED:    EEE         HHHHHHHHH  EEEEEEEEHHHHHHHHHHHHHHHHHH   EEEEEEHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHH      EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:          DTPGH                                                 NKID                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELG 400
gnomAD_SAV:        S I L TP C M      L NM  #   V           S      N       P SGG    CMQ      C     I   M IT  W VEK V
Conservation:  4954757474734533744537577574554757452755479999477455443747559444445777475977575544997775775754795999
SS_PSIPRED:    E     EEEEE    EEEEHHHHHHHHHHHH    HHHHHHHHH          EEEE          EEEEEHHHHHHHHHHHH    HHHHHHHHHH 
SS_SPIDER3:          EEEE     EEE HHHHHHHHHHHH    HHHHHHHHH    E     EEEEE         HHHHHHHHHHHHHHHHH    HHHHHHHHH  
SS_PSSPRED:          EEEE     EEEEHHHHHHHHHHH     HHHHHHHHH                      HHHHHHHHHHHHHHHHHHH     HHHHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            IHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGT 500
PathogenicSAV:                                                                            R                        
BenignSAV:                                                                                       G                 
gnomAD_SAV:       M        H          S K      VS #  R  QMD    F  I  S ##CG CVT R    #    GNAAQ C  N      T  Q    I
Conservation:  7794757797975999997755799575975997935597740754094593759537457552725957499997779979574977795799977997
SS_PSIPRED:        HHHHHH HHHHHHHHHHHHH    HHHHHHHHH   HHH    EEEEEE      HHHHHHHH      EEEEEEEEEE      EEEEEEEEEEE
SS_SPIDER3:        HHHH   HHHHHHHHHHHHH    HHHHHHHH     HH    EEEEEE      HHHHHHH       EEEEEEEEEE    EEEEEEEEEEEEE
SS_PSSPRED:        HHHHHHHHHHHHHHHHHHH     HHHHHHHHH   HHH  HHHHHH        HHHHHHHH      EEEEEEEEEE      EEEEEEEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                D  DD            DD              D                     

                       10        20        30        40        50        60        70        80        90     
AA:            IHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL 600
gnomAD_SAV:      S         S   Q       R ASH          QA  I      MM      VM        Q      V QLF  S API#     A K    
Conservation:  7777957799997977799997577477799757999577977797979499997977757759555775355544544747573575757577357799
SS_PSIPRED:    E    EEEEE         HHH EEEEEEEEEE    EEE        EEEEE          EEE                    EEEEEEEE  HHHH
SS_SPIDER3:    EE   EEEEE            EEEEEEEEEEEE  EEEE        EEEEE     EEE EEE          E  E        EEEEEEE  HHHH
SS_PSSPRED:    E    EEEEE          HHHHHHE EEEEEE   EEE       EEEEEE         EEE                     EEEEEEE   HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:              DD                                                DDDDD                                  

                       10        20        30        40        50        60        70        80        90     
AA:            PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDI 700
PathogenicSAV:                                 R   R                                             Y                 
gnomAD_SAV:            R # R    S      CK L   A   S           C  T   M   AIM                M  R  E               V
Conservation:  9997799997799997779999999997779577777755747755577957557557455775797757759999779777775777779975779777
SS_PSIPRED:    HHHHHHHHHHHHH    EEEE     EEEEE  HHHHHHHHHHHHHHH    EEE     EEEEEE      EEEEE      EEEEEEEE    HHHHH
SS_SPIDER3:    HHHHHHHHHHHH     EEEE     EEEEEE   HHHHHHHHHHHH     EEEE  EEEEEEEE       EEE       EEEEEEEE  HHHHHHH
SS_PSSPRED:    HHHHHHHHHHHHH   EEEEE     EEEEE  HHHHHHHHHHHHHHHHH  EEE   EEEEEEEE      EEE        EEEEEEEE  HHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEP 800
PathogenicSAV:                                                                              HF                     
BenignSAV:                                            S                                V                           
gnomAD_SAV:     D                    #        V     EG   S             V     R   L                 Q        VMIV  R
Conservation:  7577757477995977775777779999777797777745977555777775779529745797775777557597999999599999797777347579
SS_PSIPRED:    H         HHHHHHHHHHHH   HHHHHHHHEE       EEEE    HHH  HHHHHHHHHHHHHHHHHHHHH       EEEEEEEEEEEEE    
SS_SPIDER3:    H         HHHHHHHHHHH    HHHHHHHHE        EEEEE        HHHHHHHHHHHHHHHHHHHH         EEEEEEEEEEEEE   
SS_PSSPRED:    HH        HHHHHHHHHHHH   HHHHHHHHHH        EEE      H HHHHHHHHHHHHHHHHHHHH        HHHHHEEEEEEEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV 900
BenignSAV:                                                        K                                                
gnomAD_SAV:        #          ICT   L         C      S         I  K           L  L  I    V  V                  YVY 
Conservation:  7579797599999997997977757999775757757797779454555432445755575557757574555737545449777777577997754557
SS_PSIPRED:           HHHHHHHHHHHHHHH       EEEEEEEEE HHHHHHHHHHHHH   EEEEEEE      EEEEEEEE HHH   HHHHHHHH     EEEE
SS_SPIDER3:           E  HHHHHHHHHHH     EE  EEEEEEEE HHHHHHHHHHHH    EEEEEEE     EEEEEEEE   H   HHHHHHHH     EEEEE
SS_PSSPRED:           HHHHHHHHHHHHHHH    E   EEEEEEEE HHHHHHHHHHHHH   EEEE        EEEEEEEEE       HHHHHHHH         
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70  
AA:            FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM 972
gnomAD_SAV:    C                 HL      S   G       H    I   I  R               A S  I
Conservation:  757777777597775745977775757557999977779975779797757777555574755754495742
SS_PSIPRED:    E   EE                     HHHHHHHHHHHHH        HHHH  HHHHHHHHH         
SS_SPIDER3:    E  EEE                     HHHHHHHHHHHHH        HHHH  HHHHHHHHH         
SS_PSSPRED:                              HHHHHHHHHHHHHHH             HHHHHHHHHH        
DO_DISOPRED3:                  D                           D                           
DO_SPOTD:                                                                             D
DO_IUPRED2A:                    D             D