Q15031  SYLM_HUMAN

Gene name: LARS2   Description: Probable leucine--tRNA ligase, mitochondrial

Length: 903    GTS: 1.751e-06   GTS percentile: 0.559     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 17      BenignSAV: 8      gnomAD_SAV: 432      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MASVWQRLGFYASLLKRQLNGGPDVIKWERRVIPGCTRSIYSATGKWTKEYTLQTRKDVEKWWHQRIKEQASKISEADKSKPKFYVLSMFPYPSGKLHMG 100
gnomAD_SAV:     S #      S C     V D  A  T  K  T      M G MV   EK I L   N D  *  Q   *TF VL    LN N  M# R A R S     
Conservation:  7001003220221211201010001001000112101825574672932251144623581593254423111122112073857485889899847678
SS_PSIPRED:     HHHHHHHHHHHHHHHHHH      HH   EE                       HHHHHHHHHHHHHHH  EE         EEEEEE           
SS_SPIDER3:     HHHHHHHHHHHHHHHHHH     HHHH  EE    E EEE     E        HHHHHHHHHHHHHH              EEEEE            
SS_PSSPRED:       HHHHHHHHHHHHHHHHH                   E               HHHHHHHHHHHHHHHH            EEEE             
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDBBBBBBBB   D                                                                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                           DD                          
MOTIF:                                                                                                    YPSGKLHMG
MODRES_A:                                                                         K                                

                       10        20        30        40        50        60        70        80        90     
AA:            HVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENAAVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQ 200
PathogenicSAV:   H                    I     T                P     H                                               
BenignSAV:                 Q                                                                                       
gnomAD_SAV:    R H  N GN V QLR   R#R TST# *      TK T# K   QLL   #     KK**  C # Y  CVT    #F N  R##*C  TN CD R   R
Conservation:  8475755686554644546149456589978968998684452438216624663264274306462535359648934488455934944744456687
SS_PSIPRED:      HHHHHHHHHHHHHHH                HHHHHHHH    HHHHHHHHHHHHHHHHHH               HHHHHHHHHHHHHHHH    EE
SS_SPIDER3:       H HHHHHHHHHHH              H   HHHHHHH    HHHHHHHHHHHHHHHHHH   E E   E   E   HHHHHHHHHHHHHH   EH 
SS_PSSPRED:     E   HHHHHHHHHHHHH               HHHHHHHHH     HHHHHHHHHHHHHHHHH                  HHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:         HV                                                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            KEALVNWDPVDQTVLANEQVDEHGCSWRSGAKVEQKYLRQWFIKTTAYAKAMQDALADLPEWYGIKGMQAHWIGDCVGCHLDFTLKVHGQATGEKLTAYT 300
PathogenicSAV:                            H                                                                       M
BenignSAV:                                                           T                                             
gnomAD_SAV:     Q   S* T    G   K  VGRV# *C  #   HT    # N   T      ETS G      M D   QST  FM          L     K  S HM
Conservation:  5852776793636686676642164666875265363646696656253547265923764858762998797957289374415642522456152584
SS_PSIPRED:    E                              EEEEEE   HHHHHHHHHHHHHHHHH    HHHH HHH HH      EEEEEEEEE       EEEEEE
SS_SPIDER3:                EE                 E   HHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHH     EEEEEEEEE E       EEEEEE
SS_PSSPRED:    HH               E             HHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHH   E  EEEEEEEE        EEEEEE
DO_DISOPRED3:             DDDDDDDDDDDDDDDDDDDD                                                                     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_A:                                         K                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            ATPEAIYGTSHVAISPSHRLLHGHSSLKEALRMALVPGKDCLTPVMAVNMLTQQEVPVVILAKADLEGSLDSKIGIPSTSSEDTILAQTLGLAYSEVIET 400
BenignSAV:                            Q                                                                    D       
gnomAD_SAV:     I   M   CQM  L  R   R Q # E    VT A   NF M # SM      GI  I    T      N    VSG T          S D T   G 
Conservation:  2387566937563746292772615145126222322445345253715256139576573211052325545584932214630582173502118431
SS_PSIPRED:      HHHH    EEEE    HHHHH     HHHHHHH          EEE      EEEEEEEE          EEE     HHHHHHHHHH    EEEEE 
SS_SPIDER3:       H H    EEEE    HHHHH     HHHHHH          EEEE      EEEEEEEEEE        EEEEE   HHHHHHHHHH   EEE EEE
SS_PSSPRED:      HHHHH   EEEE    HHHHHH   HHHHHHHHH        EEEEE        EEEEEEE         E      HHHHHHHHHH   EEEEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                           DD                          

                       10        20        30        40        50        60        70        80        90     
AA:            LPDGTERLSSSAEFTGMTRQDAFLALTQKARGKRVGGDVTSDKLKDWLISRQRYWGTPIPIVHCPVCGPTPVPLEDLPVTLPNIASFTGKGGPPLAMASE 500
PathogenicSAV:             K                V       G                                                              
gnomAD_SAV:       V K#M   TK   V Q VDS  V   PWW     N I G      V Q W          YLI   A    #   #PVS VTF  S  VRS  VV  
Conservation:  1156143513825567526127204553463112397345816678987999979878785788129944596235998299232254466268922324
SS_PSIPRED:          EEE         HHHHHHHHHHHHHH         EE                 EEE          HHH                 HHHH   
SS_SPIDER3:         EEEEE H      HHHHHHHHHHHHHH      EE EEE              E EEE    EE  E HHH   E     EE      HHHH   
SS_PSSPRED:          EEEE        HHHHHHHHHHHHHHH        EE                 EE                      EEE            H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:           DDDDD                      D                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            WVNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNPHSPFNTAVADYWMPVDLYIGGKEHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLAQGLIK 600
PathogenicSAV:       R              N             L                                                                
gnomAD_SAV:    C   F       S K INML N     CH    I  R   N    T  N *     CT  E # I#  LC G      RH N  E#G#      D   F 
Conservation:  8337199682328299599799999979965976972701366211265386888465664878666655687436862233532368981468469578
SS_PSIPRED:                  HH      HHH HHHHHHH           HHHHHH          HHHHHHHHHHHHHHHHHHHH        HHHH    HHH 
SS_SPIDER3:     E         E          H H HHHHHHH           HHHHHH   HHHHH HHHHHHHHHHHHHHHHHHHHH        HHHHHH   H E
SS_PSSPRED:    HH                     HHHHHHHHH            HHHHHH    EEE  HHHHHHHHHHHHHHHHHHHHHH        HHHHHHH   H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            GQTFRLPSGQYLQREEVDLTGSVPVHAKTKEKLEVTWEKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWDVKTDALPGVLRWQQRLWTLTT 700
PathogenicSAV:                             M        K                        W                                    I
BenignSAV:                  G                                  E                                                   
gnomAD_SAV:      A C  F EC  K   Y AS I     M  #* MM    N    KRME         M   WV      S G  TM*NM             Q  IV S
Conservation:  5585332563662444544451173111443152535888888637645833321269376399647665785576785263764586488818681647
SS_PSIPRED:      EEE     EE HHH                EEEEEEE          HHHHHHHH HHHHHHHH                    HHHHHHHHHHHHHH
SS_SPIDER3:    EHEEE     EE HHH       EEE     EEEEEEE        E  HHHHHHHH HHHHHHEEH         E         HHHHHHHHHHHHHH
SS_PSSPRED:    HH                      EE     EEEEEEEE          HHHHHHHH   HHHHHHH                    HHHHHHHHHHHHH
DO_DISOPRED3:                                      DDDDDDDDD                                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                D D                                                    
BINDING:                                                K                                                          
MOTIF:                                               KMSKS                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            RFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQVTTHFTEDFSLNSAISQLMGLSNALSQASQSVILHSPEFEDALCALMVMAAPLAPHVTSEIW 800
BenignSAV:                               N                                                                         
gnomAD_SAV:    LL  D   V  S S  P SR  DD# NP A   CI  R   R      V   V * V  GS  W##  #I#    K GET   P    T     I # S*
Conservation:  3442580131072512831252245337511682462365124435425754564853754271345114437515674574562362485674444748
SS_PSIPRED:    HHHHHHH      HHH  HHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHH    HHHHHHHH
SS_SPIDER3:    HHHHHHH      HHH  HHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHH          HHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHH            HHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHH  HHHHHHH
DO_DISOPRED3:         DDDDDDDDDDDDD                                                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:               DDDDDD                                                                                  
MODRES_P:                S                                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            AGLALVPRKLCAHYTWDASVLLQAWPAVDPEFLQQPEVVQMAVLINNKACGKIPVPQQVARDQDKVHEFVLQSELGVRLLQGRSIKKSFLSPRTALINFL 900
BenignSAV:                                   D                                                                     
gnomAD_SAV:     S VPLL   FPR    V  P  P   L LDY P AD  L#   TDSEGF#E T  HK  WH*    KI   RKPA SF K #RVR  L TLTATVV   
Conservation:  4662142125311202311631415603541343153133424466632372405622352502273245526347122523315464465587475655
SS_PSIPRED:    HHH    HHH         HHH       HHHH    EEEEEEEE  EE EEEEE       HHHHHHHHH  HHHHHHH     EEEEEE    EEEEE
SS_SPIDER3:    HH                 HE     EE HHH     EEEEEEEE  EE  EEE     H  HHHHHHHHH  HHHHHHH     EEEEEE    EEEEE
SS_PSSPRED:    HHHH   HHHHH      HHHH       HHH     EEEEEEEEE               HHHHHHHHHHH HHHHHHH     EEEEE     EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                  
AA:            VQD 903
Conservation:  425
SS_PSIPRED:    E  
SS_SPIDER3:    E  
SS_PSSPRED:    E  
DO_DISOPRED3:     
DO_SPOTD:         
DO_IUPRED2A: