Q15046  SYK_HUMAN

Gene name: KARS1   Description: Lysine--tRNA ligase

Length: 597    GTS: 2.785e-06   GTS percentile: 0.867     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 8      BenignSAV: 6      gnomAD_SAV: 368      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAAVQAAEVKVDGSEPKLSKNELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEEESVDPNQYYKIRSQAIHQLKVNGEDPYPHKFH 100
BenignSAV:                                                         T   S                                           
gnomAD_SAV:    VEVLRV#*#EMG   #  #E D *T#PQP N  S E  E  AIRD      IT  ST ASA   D#DV  M   R HE#HG VVRPV LH Q A  DE L
Conservation:  6010000000101000020513353223333222453231322132122233312021102110114652356378445852551245121537788872
SS_PSIPRED:      HHHHH            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                HHHHHHHHHHHHHHHHH           
SS_SPIDER3:      HHHHH            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HH                  HHHHHHHHHHHHHHHHH          E
SS_PSSPRED:       HHHHH           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                   HHHHHHHHHHHHHHHHHH          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDD   D D     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                             
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                              
DO_IUPRED2A:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DD           D DDD        
MODRES_A:                                                                                             K            

                       10        20        30        40        50        60        70        80        90     
AA:            VDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPGKTKKGELSIIP 200
PathogenicSAV:     H                                       H                                                      L
BenignSAV:                                                                                   A                     
gnomAD_SAV:      M V    *QCTY H  Y    V V M  S #   GY  Q   H  Q D L  E T SC  F   *    N  R HWE#LT IPR  SRI   QP   L
Conservation:  5335622753353153254441440424577555553772882968555552858667534253563362144345579855861849788569999646
SS_PSIPRED:        HHHHHHHH            EEEEEEEEEEEHHH   EEEEEEE   EEEEEEEE      HHHHHHHHHH     EEEEE EEEE     EEEE 
SS_SPIDER3:    EEE HHHHHHHH       EEE EEEEEEEEEEEEE    EEEEEEEE   EEEEEEEEE     HHHHHHHHH      EEEEE    E     E EEE
SS_PSSPRED:        HHHHHHHHH          EEEEEEEEHHHHHH    EEEEEEE   EEEEEEEE      HHHHHHHHHH     EEEEE          EEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                     D                 
MODRES_A:                                              K                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            YEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAP 300
PathogenicSAV:                                                               V          M                          
BenignSAV:     H                                                                                                   
gnomAD_SAV:    HK  V  AG  #   R      E RG H KC H  M  S    C  #FE#V H  G#     V  T    LY M    M N  MA  KK GI F V    
Conservation:  0333784476458866568868666979899956466426658854768464646286613668778995994778985969968799786758769786
SS_PSIPRED:    EEEEEE HH             HHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHH   EE                             EE    
SS_SPIDER3:     EEEEE H       HH     HHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHH   EEEE                E         EE E   
SS_PSSPRED:    EEEEEE HHH    HHH     HHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHH   EEEE                          HHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                   G                       
MODRES_P:            S                                                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEEL 400
PathogenicSAV:                                                 N                                                   
BenignSAV:                                                                                                   S     
gnomAD_SAV:       #TTI   S H#     H LW K V WA   D   #   V   HCN  V V  N# LEIM R I I  GSCR         #   I H WQVS L  F
Conservation:  9957867789947689968669899999588699986989868668526665569354688953638386629864936333256996898575464159
SS_PSIPRED:    HHHHHHHHH     EEE                HHHHEEEEHHH  HHHHHHHHHHHHHHHHHHHH   EEEE         EEEE         HHHHH
SS_SPIDER3:    HHHHHHHHH      EEE              HHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHH   EEEE         EEEE     EEEEHHHHH
SS_PSSPRED:    HHHHHHHHH    EEEEE   E            HHHHHHHHHHH HHHHHHHHHHHHHHHHHHHH  EEEEE         EE           HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                             RNE     HN                                                                    
BINDING:       E                                     E Y                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            EKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYT 500
PathogenicSAV:                                                                             H                       
gnomAD_SAV:    QE  W  PA MKV     IHRTIN #  V  I  RS Q    F E# LWD     # S I# GHQ        *C #FEQ  S     LFTNRDMGS   
Conservation:  6524435583331547464433562581253658439486888996778555852775868976896588988868811169798898864579688889
SS_PSIPRED:    HHHH            HHHHHHHHHHHHH          HHHHHHHHHHHH HHH    EEE    EE                 EEEEE   EE HHHH
SS_SPIDER3:    HHHH            HHHHHHHHHHHHH          HHHHHHHHHHHHHHHH     E     EE                HHEHHHE   E   HH
SS_PSSPRED:    HHHH           HHHHHHHHHHHHHHH         HHHHHHHHHHHHH        EE                    HHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                                                                                                    EI     
BINDING:                                                                                                       N   

                       10        20        30        40        50        60        70        80        90     
AA:            ELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDKKENVATTDTLESTTVGTSV 597
PathogenicSAV:     S                                                                                            
BenignSAV:                                                                                                   S  
gnomAD_SAV:         IQ #    *RG     V  KDL TN   FI     PS  #  S#C  *ITT FM CSI R  F   V  RK N  S#  I K    A# S  
Conservation:  9886822844584294667449949883497479369969988969686958856976678489934644453462323112000000221333322
SS_PSIPRED:        HHHHHHHHHHHHHHHH   HHHHH  HHHHHHHHH      EEEEEHHHHHHHH     HHHHH                             
SS_SPIDER3:    H   HHHHHHHHHHHHHHHH     H    HHHHHHHHH           HHHHHHHH     HHHHHE                            
SS_PSSPRED:    H   HHHHHHHHHHHHHHHHH         HHHHHHHHH           HHHHHHHH     HHHHHH                            
DO_DISOPRED3:                                                                            DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                 DDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:            D  DDDDD                                                             DDDDDDDDDDDDD DDDD 
NP_BIND:                                                        GIDR                                            
BINDING:       E                                                                                                
MODRES_P:                                                                                               ST    S