Q15465  SHH_HUMAN

Gene name: SHH   Description: Sonic hedgehog protein

Length: 462    GTS: 7.834e-07   GTS percentile: 0.133     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 85      BenignSAV: 3      gnomAD_SAV: 107      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLLLARCLLLVLVSSLLVCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 100
PathogenicSAV:      T          P        LAS  R       P             K                             VF   V           H
BenignSAV:                                                                 S                                       
gnomAD_SAV:      PPE # V    FW  LW E      M       #QQ                      S    MC I   V     S  S V   N  D #S      
Conservation:  1211011021132211121120343443224231024262711332335224314442364155423526645335434343332323541325342222
STMI:          SSSSSSSSSSSSSSSSSSSSSSS                                                                             
SS_PSIPRED:     HHHHHHHHHHHHHHHHHHHH                                                 HHHH          EEE            H
SS_SPIDER3:      HHHHHHHHHHHHHHH H H                      HHH                   E    H H   E       EE         HHHHH
SS_PSSPRED:     HHHHHHHHHHHHHHHHHH                                                                  E              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDBBDDDDDD                DDD D                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                        
DO_IUPRED2A:                                                                D          D                       D   
MOTIF:                                        KRRHPKK                                                              
LIPID:                                C                                                                            
METAL:                                                                                                 EE    D     

                       10        20        30        40        50        60        70        80        90     
AA:            RCKDKLNALAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAENSVAAKSGGCFP 200
PathogenicSAV:  #      F##   K #      M           K   #  DP  N  #     R             CH           #L   Q       EV#  
gnomAD_SAV:       N         IK    M            Y       F      L       T  ST  H  A           R  S           S  E    
Conservation:  8475466365455242775539855655685935413566476655676755823265535457544664456324542334435364223542335236
SS_PSIPRED:    HHHHHHHHHHHHHHHH      EEEEEE                          HHHHHHHHHHHHH     EEEE   EEEE                 
SS_SPIDER3:    HHHHHHHHHHHHHHHH    EEEEEEEE                 E        HHHHHHHHHHHHH     EEE    EEEEEE               
SS_PSSPRED:    HHHHHHHHHHHHHHH       EEEE                           HHHHHHHHHHHHHHH                  HHHHHHH       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                           DDDDDD  DDDDD DDDDDDDD                                                      
LIPID:                                                                                                         G   
METAL:                                 TE  D D        H      D                                  H                  
SITE:                                                                                                          GC  

                       10        20        30        40        50        60        70        80        90     
AA:            GSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGPPSGGALG 300
PathogenicSAV:                  P   N E T    VG P #    #             N          FI   P   E    W                    
gnomAD_SAV:      T     H DI       R     T NY  G  C         NG  RTF    Q                  E  D P#SRK#  Y S  S   D  W
Conservation:  5141413226113131242062263322012123343542534221011206235151130132244426443220001011111111111111111110
SS_PSIPRED:       EEEE    EEEHHH     EEEEE     EEEEEEEEEEE     EEEEEEEEE     EEEE    EEEE                          
SS_SPIDER3:      EEEE     EEEHHH     EEEEE     EEEEEEEEEEE     EEEEEEEEE     EEEE    EEEE                          
SS_PSSPRED:      EEEEE     E         EEEEE      EE   EEEE      EEEEEEEEE     EEEE HHHEEE                           
DO_DISOPRED3:                                                                                   DDDDDDDDDDDDDDD    
DO_SPOTD:                                                                                    DDDDDDDDDDDDDDDDDDDD  
DO_IUPRED2A:            D DD                                                                    DDDDDDDDDDDDDDD D  
CARBOHYD:                                                                                   N                      

                       10        20        30        40        50        60        70        80        90     
AA:            PRALFASRVRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVLASCYAVIEEHSWAHRAFAPFRLAHALLAALAPARTDRGGD 400
PathogenicSAV:          C          S          A          D  V#      T       LYC        TR DS   PPT                 
BenignSAV:                          N                                                                              
gnomAD_SAV:       M   CL    S       N    V                                       M               T  #      G#      
Conservation:  0241421131282041401100100001131010400011004212523124352323324332322222025315214352011311111111111111
SS_PSIPRED:     EEEEHHH     EEEEEE      EEEEEEEEEEEEEEEEEEEEE       EEE  EEE   HH    HHHHHHHHHHHHHHHHHHHH  HH      
SS_SPIDER3:        EHHH     EEEEEE E   E EEE EEEEEEEEEEEE EE EE    EEEE  EEEEE       HHHHHHHHHHHHHHHHHHH  H        
SS_PSSPRED:      EE        EEEEEEE         EEEEEEEEEEEEE            EEEEEEEEEE      HHHHHHHHHHHHHHHHHHHHH HHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                    DDDDDD
DO_IUPRED2A:     D                                                                                             DDDD

                       10        20        30        40        50        60  
AA:            SGGGDRGGGGGRVALTAPGAADAPGAGATAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS 462
PathogenicSAV:                        A          NL                          
gnomAD_SAV:              S      LS    T  RT G          RV#  V                
Conservation:  11111111111111111111111100010022322302111450045202021622111111
SS_PSIPRED:                EE                   HHHHHHHHHHHHH  HHH           
SS_SPIDER3:                                     HHHHHHHHHHHHH  HHH    EEE    
SS_PSSPRED:               EE                   HHHHHHHHHHHHHH                
DO_DISOPRED3:   DDDDDDDDDDDDDDDDDDDDDDDDDD                                 DD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDD                                DDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDD