Q15825  ACHA6_HUMAN

Gene name: CHRNA6   Description: Neuronal acetylcholine receptor subunit alpha-6

Length: 494    GTS: 2.53e-06   GTS percentile: 0.814     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 266      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLTSKGQGFLHGGLCLWLCVFTPFFKGCVGCATEERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPM 100
BenignSAV:                                        T                                                                
gnomAD_SAV:          P   RR  GFR WM  L  TD    V K TP  # LPL K  V AM  I NS M   GMVL#   SM #G   V   V* HR#      CC  V
Conservation:  2222220022222000100002000111013112113210020142123453244314313233421423122323323333224223494966936151
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSS                                                                           
SS_PSIPRED:            HHHHHHHHHHHHHHHHH      HHHHHHHHHHH                EEEEEEEEEHHH         EEEEEEEEEEEEE  EE  HH
SS_SPIDER3:           HHHHHHHHHHHHHHHHH       HHHHHHHHHH                 EEEEEEEEEEEEE       EEEEEEEEEEEEEE E    HH
SS_PSSPRED:               HHHHHHHHHHHHH       HHHHHHHHHHHHHHH            EEEEEEEEHHHHH   HHHHHHHHHHHHH   EEE       
DO_DISOPRED3:  DDDDDDDDDDDBBBDDDDDDDDDDDDD                                                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD                                                                               
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                           N                                              

                       10        20        30        40        50        60        70        80        90     
AA:            EYDGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIGSKVDMNDF 200
gnomAD_SAV:    K   V# FHI VG  *  N   C K #  S GKV    I   DST   PLST  NR#SLT   L     *S#C   D RM   D VV     #    HY 
Conservation:  2534442457941287696646965947395434767647345726492779799979479677979959976599969767665769455663665366
SS_PSIPRED:    H     EEEE HHH     EEEEE     EEEEEE  EEEEE  EEEE    EEE               EEEEEEEE      EEEEEE      HHHH
SS_SPIDER3:    H     EEEEEHHH     EEEEE     EEEEEEEEEEEEE  EEEE        E EEEE        EEEEEE  EE    EEEEEEE     H H 
SS_PSSPRED:          EEE         EEEEE      EEEEEEEEEEEE   EEEEE   EEE       EE       EEEE         EEEEEE      HHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                               C             C                            
CARBOHYD:                                                                            N                             

                       10        20        30        40        50        60        70        80        90     
AA:            WENSEWEIIDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVV 300
gnomAD_SAV:     KT   * T          NY# G T REL *C  T   LT SK T   HF   LL  #S  HV LY    MM   * P  P L   AV     F#   G
Conservation:  9766672762747779557999946494979976567979696666575999659797656999995757976975779799999999997667979767
STMI:                                                 MMMMMMMMMMMMMMMMMMMMMMMMM       MMMMMMMMMMMMMMMMMMM          
SS_PSIPRED:         EEEEE  EEE  EE          EEEEEEEE   HHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHH      HH
SS_SPIDER3:     E  EEEEEEEEEEEEEEE       EEEEEEEEEEEE HHHHHHHHHHHHHHHHHHHHHH H       HHHHHHHHHHHHHHHHHHHHHH      HH
SS_PSSPRED:      HHHHHHHHH                  EEEEEEEEE   HHHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHH        H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                           CC                                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            PLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHTMPRWVKTVFLKLLPQVLLMRWPLDKTRGTGSDAVPRGLARRPAKGKLASHGEPRHLKECFHCHK 400
gnomAD_SAV:        D V  PLM    T M AAL F TY#SILAM A LT  RRD R   SR  MLKC  E  MSI  ET S  VSGK P    G#R  R RF V L# YE
Conservation:  9969779999766679995677999647676637837809831387126933536146112001000012110121111111010201020011111100
STMI:               MMMMMMMMMMMMMMMMMMMMMM                                                                         
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHH            HHHHHHHHHHHHHHH                                      HH       
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHEEEEEEE E          HHHHHHHHH HHHHH                                        H      
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHEEEEEE          HHHHHHHHHHHHHHHH                                              
DO_DISOPRED3:                                                               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                      D DDD        D                   

                       10        20        30        40        50        60        70        80        90    
AA:            SNELATSKRRLSHQPLQWVVENSEHSPEVEDVINSVQFIAENMKSHNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQPLLGNTGKS 494
BenignSAV:                                                   S                                               
gnomAD_SAV:     HK VA E              L YL  A Y     R V   I   I  R  GG      V    A I   M#  IS A   L    PRDP TP
Conservation:  0010101111121212112110112334423541453566465516733443233434245433644864522342244143423322000102
STMI:                                                                           MMMMMMMMMMMMMMMMMMM          
SS_PSIPRED:      HHH    HH     HHHH      HHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      
SS_SPIDER3:       H H                    HHHHHHHH HHHHHHHH     HHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHH  HH       
SS_PSSPRED:                              HHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      
DO_DISOPRED3:  DDDDDDDDDDDDDDDD                                                          DDDD            DDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDD                        D DDDDDD D       DDDDDDDD     DDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                 
MODRES_P:      S