Q2NKJ3  CTC1_HUMAN

Gene name: CTC1   Description: CST complex subunit CTC1

Length: 1217    GTS: 1.478e-06   GTS percentile: 0.438     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 9      BenignSAV: 14      gnomAD_SAV: 661      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAAGRAQVPSSEQAWLEDAQVFIQKTLCPAVKEPNVQLTPLVIDCVKTVWLSQGRNQGSTLPLSYSFVSVQDLKTHQRLPCCSHLSWSSSAYQAWAQEAG 100
BenignSAV:                                                                                  H    T                 
gnomAD_SAV:    #ET GSHGRF  #  PKV R      #  D   S AK  L  # G EIL#F    HR    H  CGLI I  V#NQ H  R N  L   G C*  SR   
Conservation:  1111111111021033111111101011211000101101011122111111011111102345534466239332622595726446421432441323
SS_PSIPRED:             HHHHHHHHHHHHHHHHH            HHHHHHHHHHHHHH          EEEEEEEHHHHHH             HHHHHHHHHH  
SS_SPIDER3:             HHHHHHHHHHHHHHHHH           HHHHHHHHHHHHHHH              EE HHHHHH             HHHHHHHHHH  
SS_PSSPRED:             HHHHHHHHHHHHHHHHHH          HHHHHHHHHHHHHHH            EEEE HHHHHHHH           HHHHHHHHHH  
DO_DISOPRED3:  DDDDDDDDDD                                                                                          
DO_SPOTD:      DDDDDDDD                                                                                            
DO_IUPRED2A:    DDD                                                                                              DD

                       10        20        30        40        50        60        70        80        90     
AA:            PNGNPLPREQLLLLGTLTDLSADLEQECRNGSLYVRDNTGVLSCELIDLDLSWLGHLFLFPRWSYLPPARWNSSGEGHLELWDAPVPVFPLTISPGPVTP 200
gnomAD_SAV:          L*    F    RV L Y  K    RN     SADI R   VE NI     P  L HRN  S T  S  R  R    Y AL M R IL   AIML
Conservation:  3111263723968483734222212220126153537255241843424431673253578393855311020123145963229335121211211201
SS_PSIPRED:             EEEEEEEEE       HHH    EEEE        EEEE  HHH   EEEEEHHH   HHH      EEEEEE    EE            
SS_SPIDER3:             EEEEEEEE      HHH      EEEE     EEEEEE   HHH   EEEE   EE            EEEE                   
SS_PSSPRED:           HHHHHHHHHH               EEEEE    EEEEEE   HHHH  EEEEE               EEEEEE                  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            IPVLYPESASCLLRLRNKLRGVQRNLAGSLVRLSALVKSKQKAYFILSLGRSHPAVTHVSIIVQVPAQLVWHRALRPGTAYVLTELRVSKIRGQRQHVWM 300
PathogenicSAV:                           V                               M                                         
BenignSAV:                                    Q                                                                    
gnomAD_SAV:         A R       K  P  M *  V    Q I      E V   PC   L R  N # V M  LS   # GV Q ##GNM   P*M  MHA HRR   
Conservation:  2242241152148105020211123528261243444031241483438222111111355353232361932362541173662733314311211243
SS_PSIPRED:         HHH HHHHH        EE   EEEEEEEHHH     EEEEEEE        EEEEEEE  HHEEEEE EE   EEEEE  EEEEEE    EEEE
SS_SPIDER3:         HHHHHHHHH        EE EEEEEEEEEEEEE   EEEEEEEE       EEEEEEEE   EEEEEEEE    EEEEEEEEEEEEE   EEEEE
SS_PSSPRED:           HHHHHHHH       EE   EEHHHHHHHH     EEEEEEE        EEEEEEE  HHHHEEEEEE   EEEEE EEEEEE     EEEE
DO_DISOPRED3:      D      D DDD DD  DD D                                                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            TSQSSRLLLLKPECVQELELELEGPLLEADPKPLPMPSNSEDKKDPESLVRYSRLLSYSGAVTGVLNEPAGLYELDGQLGLCLAYQQFRGLRRVMRPGVC 400
BenignSAV:                                              G                                                          
gnomAD_SAV:     #RA H      #RM           S TYRR  ST  SL#EQ    GF W C F   L SGN M    TS HG     R  FVS   C   P T*  #Y
Conservation:  3004313122122111221211110111211011211111120020011040633445172562445227667459333289467551111232484952
SS_PSIPRED:    EE   EEEE  HHHEEEEEE                          HHH    EEEEEEEEEEEEE    EEEEE   EEEEEE               E
SS_SPIDER3:    E    EEE      E E H                              E   EEEEEEEEEEEEE    EEEEE  EEEEEEEE       EEE    E
SS_PSSPRED:    E                HHHHH                                EEEEEEEEEEEE     EEEE  HHHEEEE              EE
DO_DISOPRED3:               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                 
DO_SPOTD:                           DDDDDDDDDDDDDDDDDDDDDDDDDD                                                     
DO_IUPRED2A:                               D DDDDDDDDDDDDDDD D                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            LQLQDVHLLQSVGGGTRRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSP 500
BenignSAV:                  A                     H                                                                
gnomAD_SAV:      FR ANP  T  A   K   SASPCST#V   L H    VR TL TCR#A  *     H#    V    #       F   ARA  RD C RY F  I 
Conservation:  6552558533233212213463376253525226723121012001112123412665223343418774323112521563422222133322212213
SS_PSIPRED:    EEEEEEEEEE         EEEEE   EEEEEEE            HH   HHHHHHHHH   HHHHHHHHHHHHHHHHHH  HHHH  EEHH       
SS_SPIDER3:    EEEEEEEEE        EEEEEE    EEEEEEEEEE              EEEHEHEEHE    HHHHHHHHHHHHHH     HHHHHHHE        
SS_PSSPRED:    EEEEEEEEE          EEEE   EEEEEEEE                HHHHHHHHHHH  HHHHHHHHHHHHHHHHHH HHHHHHHHHH        
DO_DISOPRED3:                                       DDDDDDDDDDDD                                            DD     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SLGLQLLAPTLDLLAPPGSPVRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPS 600
PathogenicSAV:   R                                                                                                 
BenignSAV:                                                                                       N               S 
gnomAD_SAV:    N R    TSA     L D A Q V K  I  ARQYS R SSW    Y # I      G  C    C       SF      RN *VH#L V*   S  S 
Conservation:  2342343152211111210006333075522261734143111122111324214111422237233251255522231351215341162441111111
SS_PSIPRED:     HHHHHHHHHHHHH         HHHHHH                      HHHHHHHHHHHHHH   HHH     HHH           EEEEEEE HH
SS_SPIDER3:     HHHHHHHHHHHH          HHHHH             E         HHHHHHHHHHHHHH   HHH                  EEEEEEEE HH
SS_PSSPRED:     HHHHHHHHHHHHH        HHHHHHHH                     HHHHHHHHHHHHHH                         EEEEEEE   
DO_DISOPRED3:   D                                                           DDDDDDDDDDDDDDDDDDDDDD                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                          DDD                                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            AFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFPSWKELSMPGFIQKQQARVYVQFFLADALIL 700
PathogenicSAV:                                                                 G                                   
gnomAD_SAV:    T       #          Y   QG GVY L   R E    VC  QQ C  LW  S H  I  NMS   SC   M   D      T ICI*L    T  P
Conservation:  1425224638561234123152527132142743211131421131336455342152453742323323422341111353242225744432253155
SS_PSIPRED:    HH   EEEEEEEEEE    EEEEEE      EEEEE        HHH   EEEEEEEEEEEE         HHH            EEEEEEEE  EEE 
SS_SPIDER3:    H    EEEEEEEEEE    EEEEEE    E EEEE          HH   EEEEEEEEEEEEE        HHE        E  EEEEEEEEEHHHEE 
SS_PSSPRED:          EEEEEEEE      EEEEE      EEE          HHH  EEEEEEEEEEEEE         HHH           EEEEEEEEEHHHEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PVPRPCLHSATPSTPQTDPTGPEGPHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPEPQGNDDNDQKVHLIF 800
BenignSAV:                      E  A                                                               K               
gnomAD_SAV:     LST      AS ISR ELIASK RR #HGQ          T C    #Q T  GM   T   C    C      EQ   LA SK#   N#SNR   F C
Conservation:  2112100112201121130101112012462642513655431461111112112111112391335134312211111152022111110213042627
SS_PSIPRED:                                 EEEEEEEE  HHEE                EEEEEEEEEE                        EEEEEEE
SS_SPIDER3:    E                            EEEEEEEE     EE  E             EEEEEEEEEEEE                      EEEEEE
SS_PSSPRED:                                EEEEEHHH HHHHHH                 EEEEEEEEEE                        EEEEEE
DO_DISOPRED3:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      DDDDDDDDDDDDDDDDDD                  DDDDDDDDDDBBBBBBB       
DO_SPOTD:           DDDDDDDDDDDDDDDDDDD                                                      DD   DDDDDDDD         
DO_IUPRED2A:           DDDDDDDDDDDDDDDDD                                                   DDDDDDDDDDDDD    D      

                       10        20        30        40        50        60        70        80        90     
AA:            FGSSVRWFEFLHPGQVYRLIAPGPATPMLFEKDGSSCISRRPLELAGCASCLTVQDNWTLELESSQDIQDVLDANKSLPESSLTDLLSDNFTDSLVSFSA 900
PathogenicSAV:                                        W                              M                             
BenignSAV:                        V                                                                                
gnomAD_SAV:      A  HC Q  QS    L VTS RPKAV    ES PS  PC   V    A FA   K SP       M  M G  NA LK    #   V    Y LT  V
Conservation:  1315349734543423855433121230462101251021114122232356253217153320011120221213143125523452242222565526
SS_PSIPRED:    E    EEEE      EEEEE                     HHHH     EE     EEEEEE    HHHHHHHHH      HHHH        EEEEEE
SS_SPIDER3:    E   E EEEH     EEEEEE     HHHHH          HHHH       E    EEEEE     HHHHHHH        HHHHH       EEEEEE
SS_PSSPRED:    E   EEEEEE     EEEEE        EEE           HHH     EEE    EEEEE       HHHHHH       HHHHHH      EEEEEE
DO_DISOPRED3:                                 DDDDDDDDDDDDDD                     DDDDDDDDDDDDDD D                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            EILSRTLCEPLVASLWMKLGNTGAMRRCVKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPE 1000
PathogenicSAV:                                                                           G           W             
gnomAD_SAV:      STQ    HP T F     KMWV K YG    TF I  Y LL  P  CV     L      A  W     F  GF    S #   W F        LL 
Conservation:  1522732312101101111421120202456551211211112114157411311412275567525252145643852236852324363436324421
SS_PSIPRED:    EEEEEEE                    EEEEEEEEEE       EEEEEE               EEEEEE EEEE     EEEEEE   EEEEEE    
SS_SPIDER3:    EEEEEEEE      EEEE        E EEEEEEEE        EEEEEE              HHEHHHHHEEEE     EEEEE   EEEEEEE    
SS_PSSPRED:    EEEE                        EEEEEEEE        EEEEEEE             HHHHHHHHHHHH     EEEEEEE  EEEEEE    
DO_DISOPRED3:              DDDDDDDDDDDDDD                                                                          
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            TTISIPLPHIYLAELLQGGQSPFQATASCHIVSVFSLQLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLC 1100
BenignSAV:         V                   V                                                                           
gnomAD_SAV:      V V    #S T*          V TFYR IF  G #  RA    #  FQ  ## HRVF YSM SSV R V #F     I K L  R S   V T R  
Conservation:  1112313413363141111112124251555324326252828416243315325221121713123443524434368664331413221242137372
SS_PSIPRED:            HHHHHHHHH     EEEEEEEEEEEEEEEEEEEE      EEE               EEEEEEEEEEEE   EEEEEEEE HHHHHHH   
SS_SPIDER3:           HHHHHHHHH       EEEEEEEEEEEEEEEEEEEE     EEE   E            EEEEEEEEEEE   EEEEEEE HHHHHHHH   
SS_PSSPRED:            HHHHHHHHH     EEEEEEEEEEEEEEEEEEEHHH   EEEE                EEEEEEEEEEEE  EEEEEEEE HHHHHHH   
DO_DISOPRED3:                                                       DDDDDDDDDDDD                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PREWASLLDFVQVPGRVVLQFAGPGAQLESSARVDEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLS 1200
PathogenicSAV:                                          H                                                          
gnomAD_SAV:         Y  G I MS  A         H  P  #ANKR#A#LH IRRI L   # V  A      LL  IAF   Q *P *      P QM    #     
Conservation:  1138315511432482514311423221101221231421451245131242633153522123321312123135445143413325321123261632
SS_PSIPRED:    HHHHHHHHHHH    EEEEEE               HHHHHHHHHH  HHH   EEEEEEE                                 EEEEEE
SS_SPIDER3:    HHHHHHHHHH     EEEEEE               HHHHHHHHHH       EEEEEEEEEE           EEEEE    E  EE      EEEEEE
SS_PSSPRED:    HHHHHHHHHHHH   EEEEEE               HHHHHHHHHH       EEEEEEEE            HHHH                  EEE  
DO_DISOPRED3:                                                                   DDDDDDDDB                          
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10       
AA:            IRESEYSSSLGILASSC 1217
gnomAD_SAV:    VQ    F  V   V  R
Conservation:  51312100211222121
SS_PSIPRED:             HHHHH   
SS_SPIDER3:    EEE        HH    
SS_PSSPRED:             HHHHH   
DO_DISOPRED3:   D DDDDDDDDDDDDDD
DO_SPOTD:            DDDDDDDDDDD
DO_IUPRED2A: