Q3SXY7  LRIT3_HUMAN

Gene name: LRIT3   Description: Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3

Length: 679    GTS: 1.726e-06   GTS percentile: 0.548     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 2      BenignSAV: 13      gnomAD_SAV: 330      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MHLFACLCIVLSFLEGVGCLCPSQCTCDYHGRNDGSGSRLVLCNDMDMNELPTNLPVDTVKLRIEKTVIRRISAEAFYYLVELQYLWVTYNSVASIDPSS 100
BenignSAV:                                                         M                                               
gnomAD_SAV:    V                                      FA    VYV K  MSF LEAA      I  H   V V    L   HF    S L       
Conservation:  9003202131112101201267428370114213113153849353452349244927517756878254364347964824924984475463365235
STMI:          SSSSSSSSSSSSSSSSSSS                                                                                 
SS_PSIPRED:     HHHHHHHHHHHHHHHH        EEE          EEEE                 EEEE       EE HHHHH      EEE       EE    
SS_SPIDER3:     HHHHH  HHHHHHH          EEE          EEEEE                EEEE   EEE E  HHHH       EEE   EEE EE    
SS_PSSPRED:    HHHHHHHHHHHH             EEE          EEEEE               EEEEEE         HHHHHHHHHEEEEEE   EEEE  HHH
DO_DISOPRED3:  DDDDDDDDDDDDDDD                                                                                     
DO_SPOTD:      DDDDDDDDDDDDDDD                                                                                     
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FYNLKQLHELRLDGNSLAAFPWASLLDMPLLRTLDLHNNKITSVPNEALRYLKNLAYLDLSSNRLTTLPPDFLESWTHLVSTPSGVLDLSPSRIILGLQD 200
BenignSAV:               G                       V                                 T     N             F           
gnomAD_SAV:         K #  H   KY V      # NV    IVV P   VI MT  V  C R   C    G      T   PDN A   PIT   MGF     VV   #
Conservation:  7469417689783991522999248253819558495884432451252247036559969895634854554437332101011111322262566579
SS_PSIPRED:            EEE          HHHH       EEE            HHH      EEE            HHH                  EEEEE   
SS_SPIDER3:            EEE    E  E  HHHH       EEE E  E      HHHH      EEE    E EE  HHHHH  H               EEEEEE  
SS_PSSPRED:    HH      EE           HHHHH       EE          HHHHHHHHHH EEE                                  EEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NPWFCDCHISKMIELSKVVDPAIVLLDPLMTCSEPERLTGILFQRAELEHCLKPSVMTSATKIMSALGSNVLLRCDATGFPTPQITWTRSDSSPVNYTVI 300
PathogenicSAV:   L                                                                                                 
gnomAD_SAV:    S    E    *TTKM   IE  VAFQ       KTDP    S *WD VK R   *# I     K         Q A    R   M  SS # LS    L 
Conservation:  9492989458344448411211467492452833722227325335573493793723658464635996865896549299928292633122342444
SS_PSIPRED:            HHHHHHHHHH                 HHH         HHH    EEEE    EEE     EEEEEEEEEE   EEEEE           E
SS_SPIDER3:            HHHHHHHHHHH           EE   HHH      H  HHH    EEEE   EEEE     EEEEEEEE     EEEEEE    EE EEEE
SS_PSSPRED:            HHHHHHHHH                         EEE  HHH     E             EEEEEEEE      EEEEEE           
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                        D         DDDD 
DISULFID:                                                                                C                         
CARBOHYD:                                                                                                     N    

                       10        20        30        40        50        60        70        80        90     
AA:            QESPEEGVRWSIMSLTGISSKDAGDYKCKAKNLAGMSEAVVTVTVLGITTTPIPPDTSERTGDHPEWDVQPGSGRSTSVSSASSYLWSSSFSPTSSFSAS 400
PathogenicSAV:                            Y                                                                        
BenignSAV:                                        L                                                                
gnomAD_SAV:     A    R  * MT WIDMF E T  HNG  E   EL  TM  AA   VA#  VS E F    #Y    APL C S I   NT *CRG             
Conservation:  6578238447854553352227583829472725715561635263712132122001000311110010031211111113111111111111111212
SS_PSIPRED:    EE       EEEEEE    HHH EEEEEEEEE   EEEEEEEEEEE                                                      
SS_SPIDER3:    E       EEEEEEE    HHH EEEEEEEE     EEEEEEEEEE                     EE                               
SS_PSSPRED:             EEEEEE         EEEEEEE     EEEEEEEEEE                                                      
DO_DISOPRED3:                                                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                            DDDDDDDDDD        DDDDDDDDDDDDDD  DDDDDDDDDDDD
DO_IUPRED2A:                                                    DDDDDDDDDDDDDDDDDDDDDDDDDD                      DD 
DISULFID:                                 C                                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            TLSPPSTASFSLSPFSSSTVSSTTTLSTSISASTTMANKRSFQLHQGGKRNLKVAKNGSKLPPASTSKKEELALLDQTMLTETNAAIENLRVVSETKESV 500
BenignSAV:             F                                                                       MA   T              
gnomAD_SAV:         F  A FFF L FP#  LN I   N   N STDKR#L H  R R I V A  H    LS  A E   Q  SN*  VMA  TS# Y SMI   N#  
Conservation:  1121121111421111232121111112112011011201001101132201401113221223213432213302110101020132322321550256
SS_PSIPRED:                            EEEEEE                      EE              HHHHHHH HHHHH     EEEEEEEEE    E
SS_SPIDER3:                                                        EE              HHHHHH  HH       EEEEEEEE     EE
SS_PSSPRED:                                                                        HHHHHHHHHH         EEEEEEE      
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD          
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                     
DO_IUPRED2A:                                DD      DDDDDDDD DDDD DDDDDDDDDDDDDDDDDD  DDDD               D         

                       10        20        30        40        50        60        70        80        90     
AA:            TLTWNMINTTHNSAVTVLYSKYGGKDLLLLNADSSKNQVTIDGLEPGGQYMACVCPKGVPPQKDQCITFSTERVEGDDSQWSLLLVVTSTACVVILPLIC 600
BenignSAV:       M                                     V                                                           
gnomAD_SAV:      A*   SAIRK SMSMS   C  R Q    #V     L V     SE*  VF #  *AS    PRV     TA VG       FMMIN  Y  N #   
Conservation:  5829221312102133226553544132232321111222322513212325852433112122185284721111111201243334435734345552
STMI:                                                                                            MMMMMMMMMMMMMMMMMM
SS_PSIPRED:    EEEEEEE     EEEEEEEE       EEEE      EEEEE      EEEEEEE          EEEEE           HHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    EEEEEE      EEEEEEEEE     EEEEE      EEEEE      EEEEEEE        EEEEEEEE        HHHHHHHHHHHHHH HHHHHH
SS_PSSPRED:    EEEEEE       EEEEEEE       EEE       EEEE       EEEEEEE          EEEEEE          EEEEHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        8
AA:            FLLYKVCKLQCKSEPFWEDDLAKETYIQFETLFPRSQSVGELWTRSHRDDSEKLLLCSRSSVESQVTFKSEGSRPEYYC 679
gnomAD_SAV:          G     P TL*  GV  AS    K M   FRNAS  C *R S N D V  F T  L  RM   R V   G   
Conservation:  4846542153232111041422544332445332232321539444121645434746334233323244313634224
STMI:          MMM                                                                            
SS_PSIPRED:    HHHHHHHHHH         HHHHH EEEEE        HHHHHH     HHHHHHHHH  HH HH              
SS_SPIDER3:    HHHHHHHHHH       H HH    EEEEE        HHHHH      HHHHHHH                     EE
SS_PSSPRED:    HHHHHHHHHH         HHHHH  EEEE         HHHHH     HHHHHHHHH                     
DO_DISOPRED3:                                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 
DO_SPOTD:                                                       D       DDDDDDDDDDDDDDD       
DO_IUPRED2A: