Q5T4T6  SYC2L_HUMAN

Gene name: SYCP2L   Description: Synaptonemal complex protein 2-like

Length: 812    GTS: 7.405e-07   GTS percentile: 0.117     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 4      gnomAD_SAV: 367      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MQAKNKDALQPIKEDRTGKAQDDAFWLQSLITDAFHDKGFQKIKEYFQQKESHFPQKYNRLLLYRLDRSINKELDKNEFQSVSLLLKCIQRFLVDGLKED 100
BenignSAV:                                                                                                  I      
gnomAD_SAV:     L  D    * V  YK            THTMVE    R         H     S   KCF  HH  T  T    Q  V CMLV    VRQ  LND    
Conservation:  3000000000000000000000000055115223312232106114532101111132411340455234233712233115334523511321121212
SS_PSIPRED:                           HHHHHHHHHHHH     HHHHHHHHH      HHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHH      
SS_SPIDER3:                          HHHHHHHHHHHH      HHHHHHHH       HHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHH      
SS_PSSPRED:                          HHHHHHHHHHHHHH    HHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDD                                                                                
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD                                                                               
DO_IUPRED2A:   D   DDDDDDDDDD                                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            EPLLIRQGLIPKLVSWFERTTGILTSEGLASDTSLICVIEDFFDTALIISRSSSEGKIQMLDSFLLSLGFLVTEKTVNHLLQQEGLKTFNCILHAVPREE 200
gnomAD_SAV:    *#   Q R     A#  KK    VIL C S  MLP   L    EA V    G      LI     R     M  NA    F#H S  I     Y   * K
Conservation:  1215412544055307643211251000010310410435354423524221303420244315411441333411211043364534491652134121
SS_PSIPRED:    HHHHHH  HHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHH     EE  HHHHHHHHHHHHH  HHH
SS_SPIDER3:    HHHHHH   HHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHH    EEEE HHHHHHHHHHHH   HHH
SS_PSSPRED:    HHHHHHH  HHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHEE    EEEEHHHHHHHHHHHHHH  HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            RKKFPLSEGMCHLMKDLARTLLTVGDYDQQVAISEALCRLTIKKSRDELVHKWFDDEVIAEAFKEIKDREFETDSRRFLNHLNNRLGDQRRVYSFPCIAA 300
BenignSAV:                                                                                               W         
gnomAD_SAV:     E L F   V   I YFT I  S    A       VP   M      K  RIL  N IV ATVE*   Q   M   C  S   HK R E K  T L MG 
Conservation:  3434113220104401451252235873264332656676422118112501772110431481273314872549186706731373133636355325
SS_PSIPRED:    HHH    HHHHHHHHHHHHH      HHHHHHHHHHHHHH  HHHHHHHHHHH  HHHHHHHHHH   HHHHHHHHHHHHHHHHH     EEEEE EEHH
SS_SPIDER3:    HHH    HHHHHHHHHHHHH      HHHHHHHHHHHH    HHHHHHHHHH    HHHHHHHHH    HHHHHHHHHHHHHHHH      EEEEEEEEH
SS_PSSPRED:    HHHH     HHHHHHHHHHHH     HHHHHHHHHHHHHH   HHHHHHHHHH  HHHHHHHHHHH      HHHHHHHHHHHHH     EEEEEEHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FADEHEMRKPADEKLEKFWIDFNLGSQSVTFYIDNAENTLWDSVTLPKEAVMNFSITETEKIKIFIIYLKKPMIISYKEVMKIEIHFDLQFNISQVSIQA 400
gnomAD_SAV:     T  # VKRAG             AN N  L #EST S P V    L  V # L V  M  VNM  T V   #   C DIR       V  SV      T
Conservation:  3430144328065255258837734724546431013204644616133150061513022233505052122022102301414173102251143024
SS_PSIPRED:    HH                EEEEE    EEEEEE          EE  HHH EEEEEEE   EEEEEEEE   EEE     EEEEEEEE    HHHHHHHH
SS_SPIDER3:    HE   H        HHH EEEEEE   EEEEEE       H  E   HHHE EEEEEE    EEEEEEE   EEE     EEEEEEE     HHHHHHHH
SS_PSSPRED:    H                 EEEEE   EEEEEEE          EE  HHH EEEEEEEE   EEEEEEE            EEEEEEE    HHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                         D
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LGEDKQMLPDQTKISSELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHY 500
gnomAD_SAV:       G HT   EM   L   N #HE*G#  T    KKAA   * A #       N SS  S RV  E# SHIT D   V Q  L SQ RA  LS  R    
Conservation:  4300202120110000100000000001010010100001011010110111023010010101101020001111110001002111110311101000
SS_PSIPRED:    H              HHHH              HHHHHHHHHH              EEEE                                       
SS_SPIDER3:    H              H H               HHHHHHHHH  HH H            E                                       
SS_PSSPRED:    H                                   H HHHH               EEE                                        
DO_DISOPRED3:     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:         D    DD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD           DD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            RKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDS 600
gnomAD_SAV:    K PFL  G  A   #   *    Q  F     G  T G       #     NG   YV VR  R   *     KK     T NAG#  R TS    VV  
Conservation:  1111213122101021131212101111111023121101112212413211120211110110010020101211000000000011010010111210
SS_PSIPRED:                                                               HH                                      H
SS_SPIDER3:                                                             HHHH                                       
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDD

                       10        20        30        40        50        60        70        80        90     
AA:            AQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIPEGSFAKSQQSRLEEEVAPGSPFSITEERELPEGISTSSLEVVPENL 700
BenignSAV:                                                   D                        S                            
gnomAD_SAV:     RQ   * R  P   T  R#    KE  T    L AQ IN RR R DW G  V   G V     TS *  VS     K *  Q LK   I F    S   
Conservation:  1101001111222032111011111011000001100100111101001001011000120001112101110010110220201001112011201011
SS_PSIPRED:    H                                          EE              HHHHHHHHHH                               
SS_SPIDER3:     H           H                                                  HHH         E                       
SS_PSSPRED:                                             HHHHHH             HHHHHHHHH                               
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDD      

                       10        20        30        40        50        60        70        80        90     
AA:            NGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAPDCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHLEKEVLEFWGKQSADLQSFCD 800
gnomAD_SAV:    IS   F     VA  Q GE*      H# DL    RVL  V    K L ML  # # H   S  P  T  E  F # QY      G *  R#T MR  R 
Conservation:  1011300422142123222110100123012211122112311310231113112421430252234113533111610342432121232100311311
SS_PSIPRED:        HHHHHHHH HHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:          HHHHHH H HHH H          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:         HHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:  DD                     DDDDDDDD                                        DD  DD DD                    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                              
DO_IUPRED2A:                                                                                                       

                       10  
AA:            LQVLRFNSTQTS 812
gnomAD_SAV:          S  RI 
Conservation:  120150000000
SS_PSIPRED:    HHHHHHHH    
SS_SPIDER3:    HHHHHHH     
SS_PSSPRED:    HHHHHHH     
DO_DISOPRED3:  DDDDDDDDDDDD
DO_SPOTD:          DDDDDDDD
DO_IUPRED2A: