Q5VV42  CDKAL_HUMAN

Gene name: CDKAL1   Description: Threonylcarbamoyladenosine tRNA methylthiotransferase

Length: 579    GTS: 1.438e-06   GTS percentile: 0.420     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 231      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQKYLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASD 100
BenignSAV:                                           Q                                                             
gnomAD_SAV:          N   Y   VMMFE   Q   K  L NE  L#IQ *S  N   V  K LLNV#  L  *    *# C  YS  V   VT      VH    KT #
Conservation:  6113354123466674341032241152225315354353312210131012033232124313342443355234136553553274417513311322
SS_PSIPRED:             HHHHHHHH                           EEE                 EEEEEEE     HHHHHHHHHHHHH   EE   HHH
SS_SPIDER3:            HHHHHHHHH                             HH               EEEEEEEE     HHHHHHHHHHHHH   EE   HHH
SS_PSSPRED:            HHHHHHHH                          HHHHHHHH              EEEEEE        HHHHHHHHHHHH          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD  DD    BBBBDDDDDDDDDDDDDDDD                                                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                         
DO_IUPRED2A:              D  DDDDDDDDDDDDDDDDDDDDD    DDDDDDDDDDDDDDDDDDDDD                                        
METAL:                                                                                 C                           
MODRES_P:                                                          S                                               

                       10        20        30        40        50        60        70        80        90     
AA:            ADLWLLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIR 200
gnomAD_SAV:          T #S    P      T     K    MI     L    L GCF  Q VT  K LE            Q      H N#  KQ   T# Y T M 
Conservation:  4533443443422271232322322214222423524533354623555423573641224142344333442334344223211422221022223343
SS_PSIPRED:      EEEEE      HHHHHHHHHHHHHHH    EEEEE               EEEE   HHHHHHHHHHHH    EEEEEEE                  
SS_SPIDER3:      EEEEE      HHHHHHHHHHHHHHH   EEEEE             EE EEEE   HHHHHHHHHHHHH   EEEEE                  E 
SS_PSSPRED:      EEEEE       HHHHHHHHHHHHHHH   EEEE        HHHH    EEE    HHHHHHHHHHHHH  EEEEEE                    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                          DD              
DO_IUPRED2A:                   DDDDDDDD                                                                            
METAL:                 C                            C                                                              
MODRES_P:                           S                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            KNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEVIPEGAMLRLGMTNPPYILE 300
gnomAD_SAV:    RK        S R  S       E T *S S   TA     VRPF  D I   R N   M     G#  SFL             V      I L CL  
Conservation:  4445335546347633384443344255232555333441442443249446434334644864453632542442225325543344644455546335
SS_PSIPRED:         EEEE                         HHHHHHHHHHHHH    EEEE EE            HHHHHHHHHHH     EEEE    HHHHHH
SS_SPIDER3:        EEEEEE         E EE           HHHHHHHHHHHHH   EEEEEEE             HHHHHHHHHHH     EEEE      HHHH
SS_PSSPRED:        EEEEEE                        HHHHHHHHHHHHHH   EEEEE              HHHHHHHHHHH     EEEEE    HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                      C   C  C                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            HLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGT 400
gnomAD_SAV:    L      NV  T  *       RAP NGI   # G C LS                 V S  LY   E A R     M#  A  Q  N           A
Conservation:  3334433330344433465364644552562243523121221122222212575444536454574475425632342331143443333425446565
SS_PSIPRED:    HHHHHHHHH    EE EE        HHHHHH      HHHHHHHHHHHHHH    EEE  EEE      HHHHHHHHHHHHH      EE         
SS_SPIDER3:    HHHHHHHHH    EE EEE E      HHHHH      HHHHHHHHHHHHHH    EEEEEEEE      HHHHHHHHHHHHH      EE E       
SS_PSSPRED:    HHHHHHHHHH   EEEEEE       HHHHHHH  HHHHHHHHHHHHHHHHH    EEEEEEEE      HHHHHHHHHHHHHH     EEEE       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTP 500
BenignSAV:                                                        F                               R                
gnomAD_SAV:    S       R E          QA           DK             R F   S  C  L     RVL#      Y C *VRY V A R THV   MS
Conservation:  5553312431134337322531321111231323532313323324242221233423322444330203274434835134433222312211212213
SS_PSIPRED:      HHH    HHHHHHHHHHHHHHHHH   HHH    EEEEEEEEE     EEEEE     EEEE   HHH   EEEEEEEE    EEEEEEE        
SS_SPIDER3:     H       HHHHHHHHHHHHHHHH           EEEEEEEEEE    EEEEE    EEEEE   HHH   EEEEEEEEE   EEE EE EE      
SS_PSSPRED:             HHHHHHHHHHHHHHHHHH        EEEEEEEEEE     EEEEE    EEEE    HHH  EEEEEEEEEE   EE EEE         
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                         D
DO_IUPRED2A:       DDDDDDD                                                                                         
MODRES_P:                                                                                                        T 

                       10        20        30        40        50        60        70        8
AA:            SISKPLAKGEVSGLTKDFRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVKVYN 579
gnomAD_SAV:    F   L    #IL  IR   DR RDH      N TT R   V  KTA S    #E RV   FM  T   F    LGNIC 
Conservation:  5411732353555322233010100001020011012202100100100010111012211222441223213111111
STMI:                                                                 MMMMMMMMMMMMMMMMMMMMMMM 
SS_PSIPRED:                   HHH                         EEEE   HH    HHHHHHHHHHHHHHHHHHHHHH 
SS_SPIDER3:              E    H H                           E    H  HHHHHHHHHHHHHHHHHHHHHHHH  
SS_PSSPRED:                                                          HHHHHH HHHHHHHHHHHHHHHHH 
DO_DISOPRED3:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                               
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                   
DO_IUPRED2A:                               DD  DD