Q6P996  PDXD1_HUMAN

Gene name: PDXDC1   Description: Pyridoxal-dependent decarboxylase domain-containing protein 1

Length: 788    GTS: 2.155e-06   GTS percentile: 0.707     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 4      gnomAD_SAV: 408      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGA 100
BenignSAV:                                                                                      M                  
gnomAD_SAV:     E F    TGT    VE IVT GL      HKG    DV    #     R   G E    V *    PT            M DTA  D L   R G  #
Conservation:  2222222228246345344624764385332322322033211122585875538674345955653634446433121132523654555579977657
SS_PSIPRED:      HHHHHHH HHHHHHHHHHHHHHHHHHHHHHH                        HHHHHHHHHHHH                    HHHHHHHHHHH
SS_SPIDER3:      HHHHHH  HHHHHHHHHHHHHHHHHHH                            HHHHHHHHHHH                   HHHHHHHHHHHHH
SS_PSSPRED:     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                          HHHHHHHHHHHH                     HHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDD                                   DD                                                      
DO_SPOTD:      DDDDDD                        DDDDDDDDDDD                                                           
DO_IUPRED2A:   DDDDDDDDDDDDDD D  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D                   DDDDDDDDDDDDDDDDDD             

                       10        20        30        40        50        60        70        80        90     
AA:            YISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPC 200
gnomAD_SAV:              TR R  VPL   V            V  YG    E VNL # TL  QH   IA   S  CK  LIV   TD K SQA *     V  C  
Conservation:  6373524444544358759858886566777756555796558596355989445445566335852462132846624443624675368496448456
SS_PSIPRED:    HHHH  HHHH HHHHHHHHHHHHHHHHHH      EEEE  HHHHHHHHHHHHHHHH  HHHH    HH     EEEE     HHHHHHHHHH    HHH
SS_SPIDER3:    HHH   HHHH HHHHHHHHHHHHHHHHH      EEEEE   HHHHHHHHHHHHHHH HHHHH  E        EEEEE      HHHHHHHH    HHH
SS_PSSPRED:    HHHH  HHHHHHHHHHHHHHHHHHHHHHH       EEE  HHHHHHHHHHHHHHHH                 EEEE       HHHHHHHHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG 300
BenignSAV:         H                                                                                               
gnomAD_SAV:      H H  A    #R#        Q#   M *        T        R   T KF G RQ #C    G RM     V V   P   V      L   L 
Conservation:  5628988939996956545485545554241553645746457624556764445654582662599966986997958324373554746658555678
SS_PSIPRED:    EEEEE            HHHHHHHHHHHHH     EEEEEEE          HHHHHHHHHHH          HHHHHH    HHH HHHH  EEEE   
SS_SPIDER3:    EEEEE            HHHHHHHHHHHHH     EEEEEEE          HHHHHHHHHHH  EEEEE   HHHHH     HHHHHHH   EEEE   
SS_PSSPRED:    EEEE             HHHHHHHHHHHHHH    EEEEEE           HHHHHHHHHHH  EEE  HHHHHHHHH   HHHHHHHH   EEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPG 400
BenignSAV:     L                                                                                                   
gnomAD_SAV:    R #   PF E  V E# E V  S  V    N   E H           V  V         E I G   N    #     G N  N    M    L   V
Conservation:  2989997445688967689666956894564534575687886788588648542664353188535632842322554466442156657658235021
SS_PSIPRED:    HH       EEEEEE   HHHHH              HHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHH    EEEEE       EEEEEE      
SS_SPIDER3:    H    E  EEEEEEE   HHHHH              HHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHH    EEEEEE      EEEEE       
SS_PSSPRED:             EEEEEE    HHHHH            HHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHH   EEEEEE      EEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SDPVFKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVACIESKLPVLCCTLQLREEFK 500
gnomAD_SAV:    AGL LQVIRLL   LL  DQKK LS VV C   K     M PG  ILTY        W    VI     SWEKN  HFIG VG R R  R MF  #A LE
Conservation:  2311103132422213112266222755648653552335726855655943453756558628433658402764174235122543633832562393
SS_PSIPRED:                         HHHHHHHHHHHHHHHHHH HH   EEEEE    EEEEEEEEE        HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:           E             HHHHHHHHHHHHHHHHHHHHH   EEEEE     EEEEEEEE        HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:                         HHHHHHHHHHHHHHHHHH      EEEE     EEEEEE E         HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:         DDDDDDDDDD DD                                                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                  D  D                                                                                 
MODRES_P:                   T                                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            QEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPEGENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIE 600
BenignSAV:                                     N                                                                   
gnomAD_SAV:          T   HA       V F   KRT  G N   LY KW       RQ    #  E     RSG EGT R     LVT#TAN   F#  T##S QATQ
Conservation:  3541222182534523657585487311134131233224244661376558357658518417585223336667746266455237434522366657
SS_PSIPRED:    HHHHH   EEEE       EEEEEEE            HHHHHHHHHHHHHHHHH  HHHH         EEEEEE        HHHHHHHHHHHHHHHH
SS_SPIDER3:    HHHHH   EEEEE      EEEEEEEE           HHHHHHHHHHHHHHHHH    EHHE        EEEEEE       HHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHH   EEEE       EEEEEEE             HHHHHHHHHHHHHHHHH HHH            EEEEE       HHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                    DDDD D                                                                
DO_IUPRED2A:                                 DDDDDDDDDD                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            ENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPVVGSVLNWFSPVQALQKGRTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQR 700
gnomAD_SAV:    KSL    D     W   *KT*LA K     W  K #L W   I RFM   C LAH   E TS    # F  TK L   C   D   MPSSA L  CA #M
Conservation:  5455665987847559946972684765656644964385664453345875834432453444543846466514832548212124323732232224
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHH  EEEEEE             EEEE   EEEE   EEEEEE                   
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HH    E EEEE           EEE     EEEE   EHHEHH                   
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH          HHHH            EEE    EEEE   EEEEEEE                  
DO_DISOPRED3:                                                                                      DDDDDDDDDDDDDDDD
DO_SPOTD:                                                               DDDDD   DDDD DDDDD      DDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                   D               DDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                         S                                  T   T         

                       10        20        30        40        50        60        70        80        
AA:            LPGQKPFKRSLRGSDALSETSSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQKGVPHPEDDHSQVEGPESLR 788
gnomAD_SAV:     R #T Y K  Q   D R INL GQT # G  GH F EL H   K   ID Y ET N#  SNPIKPL*#E L  VE N KA  L   #
Conservation:  1474526573235352153545324133111010110011000111001000101000010100110110000111222222220101
SS_PSIPRED:                           HHHHHHHHHH                               HHHH                    
SS_SPIDER3:                            HHHHHHHH                                HHH                     
SS_PSSPRED:                                HHHHH                                                       
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:               S       S   S                         S        S                     S      S