Q6UVM3  KCNT2_HUMAN

Gene name: KCNT2   Description: Potassium channel subfamily T member 2

Length: 1135    GTS: 1.012e-06   GTS percentile: 0.228     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 3      BenignSAV: 2      gnomAD_SAV: 343      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MVDLESEVPPLPPRYRFRDLLLGDQGWQNDDRVQVEFYMNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWSHIFWVNR 100
gnomAD_SAV:    T    N    M           VN    S NS E     K S L            T     C         # FS V  I   K    S  YYV   D 
Conservation:  2222020000010001000200010000002243533431222323232423341242454333324343225524442363321201000612536525
STMI:                                                                         MMMMMMMMMMMMMMMMMMMMM                
SS_PSIPRED:                     EE             EEHHHH     HHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHH            EEEE  
SS_SPIDER3:                    EEE              EEEEE  HHHHHHHHHHHHHH   HHHHHHHHHHH HHHHHHHHHHHHH         EEEEEE   
SS_PSSPRED:                                     EEEEEE HHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHH              E   
DO_DISOPRED3:  DDDDDDDDDDDDDBBBBBBBBBBBBBBB                                    DDDDD DD                            
DO_SPOTD:      DDDDDDDD                                                                                            
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                                        N 

                       10        20        30        40        50        60        70        80        90     
AA:            SLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPFIISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRAIQRTQSAMFNQVL 200
PathogenicSAV:                                                                                          H          
gnomAD_SAV:      R     F         RM  CS              H T D   T        C #  K             R   S      I   C          
Conservation:  1024423362452354323253345444554345433335355334429534543303563577878888998835886445746666446456455664
STMI:           MMMMMMMMMMMMMMMMMMMMM               MMMMMMMMMMMMMMMMMMMMM      MMMMMMMMMMMMMMMMMMMMM             MM
SS_PSIPRED:       HHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHH    HH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:      HHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:        HHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHH     HH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ILISTLLCLIFTCICGIQHLERIGKKLNLFDSLYFCIVTFSTVGFGDVTPETWSSKLFVVAMICVALVVLPIQFEQLAYLWMERQKSGGNYSRHRAQTEK 300
PathogenicSAV:                                        L N                                                          
gnomAD_SAV:             MIPR        *      ILE   L          R  I#  RC R     T        L           D      DC #    I N
Conservation:  4554453744685486656847461364564547996888866958664825534546644554646446645355434965655548834553644656
STMI:          MMMMMMMMMMMMMMMMMMM         IIIIIIIIIIIIIIIIIIIII       MMMMMMMMMMMMMMMMMMMMM                       
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHH            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                
SS_SPIDER3:    HHHHHHHH HHHHHHHHHHHH       HHHHHHHHHHHH            HHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHH              
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHH            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH              
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                            DDDD D        
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            HVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDVQVRRVLQIPMWSQRVIYLQGSALKDQDLLRAKMDDAEACFILSSRCEVDRTSSDHQTI 400
gnomAD_SAV:      A  D   R       *S Y         H E      I A  L      L*P      K       G     # ET     P  H    K   #    
Conservation:  6455986554466658688866656257455555566463613554583567764997677775666579366654353655565473433524556667
SS_PSIPRED:     EEEEEE   HHHHHHHHHHHH        EEEEEE     HHHHHHH   HHH  EEEEE     HHHHHH       EEEEE         HHHHHHH
SS_SPIDER3:    EEEEEEE   HHHHHHHHHHH         EEEEEE     HHHHHHH       EEEEEE     HHHHHHH      EEEEE       HHHHHHHHH
SS_PSSPRED:     EEEEE    HHHHHHHHHHHH       EEEEEE      HHHHHHHH   HHHEEEEEE     HHHHHHH      EEEEE         HHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LRAWAVKDFAPNCPLYVQILKPENKFHIKFADHVVCEEEFKYAMLALNCICPATSTLITLLVHTSRGQEGQQSPEQWQKMYGRCSGNEVYHIVLEESTFF 500
BenignSAV:                 W               N                                                                       
gnomAD_SAV:               D               V   N     *          SV     I   V  L   RRK   LL    N#  G# R    #TA       
Conservation:  7767757797736576677976767976684355656564444455435466333434255353533354216442845275355555643414147255
SS_PSIPRED:    HHHHHHHHH     EEEEE  HHHHHHHH   EEEEHHHHHHHHHHHH    HHHHHHHHHHH          HHHHHHHHHHHH  EEEEEEE      
SS_SPIDER3:    HHHHHHHHH     EEEEEE HHHHHHHH    EEEHHHHHHHHHHH     HHHHHHHHHHHHH        HHHHHHHHHH    EEEEEEE     H
SS_PSSPRED:    HHHHHHHHH     EEEEE  HHHHHHH    EEEEHHHHHHHHHHHHH  HHHHHHHHHHHHH         HHHHHHHHHHHH  EEEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                          DD    D                      

                       10        20        30        40        50        60        70        80        90     
AA:            AEYEGKSFTYASFHAHKKFGVCLIGVRREDNKNILLNPGPRYIMNSTDICFYINITKEENSAFKNQDQQRKSNVSRSFYHGPSRLPVHSIIASMGTVAID 600
gnomAD_SAV:        R   I      R    I  T AT KND TNW    LQ LL  # # L       K    RS E H   #   LS R LAG T              
Conservation:  2541656843557545464745425233222323213643333423263644455355725223222100201111102123326533335533754645
SS_PSIPRED:    HHH    HHHHHHHHHHHH EEEEEEEE    EEEE     EE     EEEEEE  HHHHHHHHHHHHHH                   HH      HHH
SS_SPIDER3:    HHH   EHHHHHHHHHHH  EEEEEEEE    EEEEE   EEE     EEEEEEE H HHHHHHHHHHH                 EEEEEE    E E 
SS_PSSPRED:    HHH    HHHHHHHHHHHH  EEEEEE     EEEE     EEE    EEEEEE  HHHHHHHHHHHHHH                  EEEE        
DO_DISOPRED3:                                                                D DDDDDD                       DDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                DDDDDDD    DDDD                        

                       10        20        30        40        50        60        70        80        90     
AA:            LQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADTSSIQTCDLLSDQSEDETTPDEEMSSNLEYAKGYPPYSPYIGSSPTFCHLLHEKVPFCCLRLD 700
gnomAD_SAV:    M GA    T  RA  FA K#NEDV          F  I L H  G     T    PS#  TP #     #    P H    L     VNV  A   ISFV
Conservation:  3433222311213524523210205645534744324221233344435444542233321010014348664458688865458684317343986586
SS_PSIPRED:                                                              HHHH                     HHHH         EE  
SS_SPIDER3:                                                                                         HH       EEE   
SS_PSSPRED:                                                                                       HHHHHHH    HHH   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD        D                              
DO_SPOTD:        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                
DO_IUPRED2A:            D DD   DDDDDD    D                  DDDDDDDDDDDDDDDDDDDDD                                  

                       10        20        30        40        50        60        70        80        90     
AA:            KSCQHNYYEDAKAYGFKNKLIIVAAETAGNGLYNFIVPLRAYYRPKKELNPIVLLLDNPPDMHFLDAICWFPMVYYMVGSIDNLDDLLRCGVTFAANMVV 800
gnomAD_SAV:     R    CN  V G     N   F G  #        L   V   S  *F  V V    L            #VL  VM C                 V  
Conservation:  5282911286664735455566665825897578855868745834548485678864175125755743574446435444465446558435542456
SS_PSIPRED:            HHHHHH     EEEEE    HHHHHHHHHHHHHH         EEEEE     HHHHHHHH    EEEEE     HHHHHHH HHHH EEEE
SS_SPIDER3:           HH HHH     EEEEEEE    HHHHHHHHHHHHH         EEEEE     HHHHHHHH    EEEEE     HHHHHHH HHH  EEEE
SS_PSSPRED:     HHHHHHHHHHHHH     EEEEEE   HHHHHHHHHHHHHH         EEEE      HHHHHHHHH   EEEEE     HHHHHHH HHHH EEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            VDKESTMSAEEDYMADAKTIVNVQTLFRLFSSLSIITELTHPANMRFMQFRAKDCYSLALSKLEKKERERGSNLAFMFRLPFAAGRVFSISMLDTLLYQS 900
gnomAD_SAV:        N    K        I      P #     R        V             #    I QN   G D D T   * L       NV          
Conservation:  5568445463656566555565434344855363545554465455543534532342234254535633645846663484455644544544655563
SS_PSIPRED:    E          HHH HHHHHHHHHHHHHH     EEEEE  HHHHHH          HHHHHHHHHHHH      HH         EEHHHHHHHHHHHH
SS_SPIDER3:    E                HHHHHHHHHHHH     EEEEE   H HHHHHH     HHHHHHHHHHHHHH      EEE  HHH      HHHHHHHHHHH
SS_PSSPRED:    E          HHHHHH HHHHHHHHHHHHH    EEEE    HHHHHHHHHHH HHHHHHHHHHHHHHH   HHHHH HHHH  EEEHHHHHHHHHHHH
DO_DISOPRED3:       DDDDDDDDDD                              DDDDDDDDDDDDDDDDDDDDDDDD                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FVKDYMISITRLLLGLDTTPGSGFLCSMKITADDLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHRSNHRNST 1000
gnomAD_SAV:        C F VM  M A  N  R      #    #    K           TAA   F V   G  NFII    L  N G  G N   E HE  H   C   
Conservation:  5444333143344456332743635423252423553246555432254423445365444324121122341422322124212011001002114111
SS_PSIPRED:    H  HHHHHHHHHHH                 HHHH    HHHHHHHHHH      EEEEE                HHHH                    
SS_SPIDER3:    H    HHHHHHHHH                 HHH    EHHHHHHHHHH    EEEEEEE                HHHHH                   
SS_PSSPRED:    H HHHHHHHHHHHH          EEE    HHHH    HHHHHHHHHHH   EEEEEE                                         
DO_DISOPRED3:                       D DDDDD                                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                      DDDDDDDD      D  DDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                 DDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SSDQSDHPLLRRKSMQWARRLSRKGPKHSGKTAEKITQQRLNLYRRSERQELAELVKNRMKHLGLSTVGYDEMNDHQSTLSYILINPSPDTRIELNDVVY 1100
gnomAD_SAV:        L Q S W   I** Q  TG      S                P    P              A   N    N #A  HT    F  I      IL 
Conservation:  2222131333634522635243322131122132213245113234465457334342653364533133222231132245364362333232322244
SS_PSIPRED:                HHHHHHHHHH         HHHHHHHHHHHHH   HHHHHHHHHHHHHHH                  EEEEE            EEE
SS_SPIDER3:           HHHHHH HHHHHHH          HHHHHHHHHHH     HHHHHHHHHHHHHHH                   EEEE            EEE
SS_PSSPRED:                  HHHHHHHH         HHHHHHHHHHHHHH  HHHHHHHHHHHHHHHH                  EEEE            EEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   D D         DDD                                 
DO_SPOTD:      DDDDDDDDDDD   DDDD DDDDDDDDDD                                                                       
DO_IUPRED2A:   DDDDDDDDDD     D   DDDDDDDDDDDDDDDDDDDDDDDDD  DDD  D DDDDDD    DDDDDDDDD    D DDDDDDDDD        D    
NP_BIND:                               GPKHSGKT                                                                    

                       10        20        30     
AA:            LIRPDPLAYLPNSEPSRRNSICNVTGQDSREETQL 1135
gnomAD_SAV:      Q  SMV        LK#R Y#D S  FWA#I  
Conservation:  54534423132111110111010101111111110
SS_PSIPRED:    EE                             HH  
SS_SPIDER3:    EE                                 
SS_PSSPRED:    EE                                 
DO_DISOPRED3:       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                DDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:           DDDDDDDDDDDDDDDDDDDDDDDDDDD