Q7L985  LIGO2_HUMAN

Gene name: LINGO2   Description: Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

Length: 606    GTS: 1.863e-06   GTS percentile: 0.604     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 311      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLHTAISCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGA 100
gnomAD_SAV:     F #V  #C L     ALVM  R  T   T      #         *  ST D    KI VF# T  K NGI # G VL L          VTTI   A 
Conservation:  9363424595646465443343445269966979667467929897951389797939965989998763254666923764696696969573469996
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                         
SS_PSIPRED:        HHHHHHHHHHHHHHHHHH          EEE    EEE                  EEE       EE HHH        EEE      EEE    
SS_SPIDER3:          HHHHHHHHHHHHHHH           EE     EEEE      E         EEEE    E EEE HHHH       EEE       EE    
SS_PSSPRED:        HHHHHHHHHHHHHHHHH           EE     EEEE               EEEEE          HHH        EEE             
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDD                                                                              
DO_SPOTD:      DDDD D DDDDDDDDDDDD                                                                                 
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                           N                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            FNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHL 200
gnomAD_SAV:      T  #PC  H   SC    S   LM         VT  N IL   HI  E YK    KMRE GF F  RS  R   # KK N   Y#  V RA   F  
Conservation:  9516457669597799769553889579599919969796798778769968559749779996986878599799369619599799993896799968
SS_PSIPRED:            EEE                     EEE       EE            EEE                     EEE            HHH  
SS_SPIDER3:            EEEE   E EE             EEE   EEEEEE   H        EEEEE     E             EEEEE  E  E    HHH  
SS_PSSPRED:            EEE       EE             EE     EEEE HHHH       EEE        E HHH         EE          HHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                   N                                                         N            

                       10        20        30        40        50        60        70        80        90     
AA:            RSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQ 300
gnomAD_SAV:    C#  G R  RFY  SI  H   T       # #  LS  V HSKNRHD    # A SSA  PII Y #     HV    F C   ##V  RV     C  
Conservation:  6584396755938614435696794585296752835971473957779998196596876724961655862696499896669217633561463795
SS_PSIPRED:        EEE             HH      EEE                     EEE                     EEE                     
SS_SPIDER3:        EEE             H       EEE     HHH             EEE   EE  E   HHH       EEE       E             
SS_PSSPRED:         EE          HHHHHH     EEE           HHHH      EEE          HHHHH      EEE                     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                    N                     

                       10        20        30        40        50        60        70        80        90     
AA:            ELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLLWILQRQPTLQFGGQQPMCAGPDTIRERSFKDFHSTA 400
BenignSAV:                             L                                                                           
gnomAD_SAV:     F VAR H##P#KH P    CS HL SMAE       K      MV    C  #              QK   HIA  KA R SLN TL S   #   IS
Conservation:  7764546681366347968630955877959396959325954443923948639994999994968652224165314929336644453356652433
SS_PSIPRED:    EEEE      EE            EEE                     EEE         HHHHHHHH            EE   HHH    HHH  HHH
SS_SPIDER3:    EEEE      EE   H        EEE      HH    H        EEEE        EEHHHHHH            EE   HHH   EHHH  HHH
SS_PSSPRED:    EEE     EEE  HHH        EEE                     EEEE          HHHHHHH                               
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                N                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            LSFYFTCKKPKIREKKLQHLLVDEGQTVQLECSADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGMYVCIASNAAGNDTFTASLTV 500
gnomAD_SAV:    I S  I  NT  H        I  EEI  V  ##  N   A  #   Q HL      E  IM SN  F TC   NL GVV   FS       NC V    
Conservation:  8638569289493553441316599815250937693939254925954414517646933651795956724737939393949695999672367839
SS_PSIPRED:                      EEEE     EEEEEE       EEEEE     EE       EEE    EEEEE   HHH EEEEEEEE     EEEEEEEEE
SS_SPIDER3:               E       EEE    EEEEEEEE      EEEEE     EE      EEEE    EEEEE   H H EEEEEEEE      EEEEEEEE
SS_PSSPRED:                 HHHH         EEEEEEE       EEEEE    EEE      EEEE    EEEEE        EEEEEEEE      EEEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                   D                                                                   
DISULFID:                                     C                                                  C                 

                       10        20        30        40        50        60        70        80        90     
AA:            KGFASDRFLYANRTPMYMTDSNDTISNGTNANTFSLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRR 600
BenignSAV:           H                                                                                             
gnomAD_SAV:    R LT  C   V  ISR  #N DVIT S # DS          L AV              VV SLRT   C Q SNT        I A     #      
Conservation:  7552795376696765334635431495922335468999999999999999996997998797999998989856995977997479422724233379
STMI:                                                       MMMMMMMMMMMMMMMMMMMMM                                  
SS_PSIPRED:                                         HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH         EEEEEE                  
SS_SPIDER3:    EEE                                  HHHHHHHHHHHHHHHHHHHHHHHHHHH H          EEEEE E               EE
SS_PSSPRED:    E                                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHH          EEEE                  E
DO_DISOPRED3:                DDDDDDDDDDDDDDDDDD                                              DDDDDDDDDDDDDDDDDDDD D
DO_SPOTD:                         DDDDDDDDDDDD                                                       DDDDDDDDDDDDDD
DO_IUPRED2A:                       DDD                                                                             

                     
AA:            FNMKMI 606
Conservation:  789997
SS_PSIPRED:     EEEE 
SS_SPIDER3:    E     
SS_PSSPRED:    EEEEE 
DO_DISOPRED3:  D     
DO_SPOTD:        DDDD
DO_IUPRED2A: