Q86UE6  LRRT1_HUMAN

Gene name: LRRTM1   Description: Leucine-rich repeat transmembrane neuronal protein 1

Length: 522    GTS: 1.421e-06   GTS percentile: 0.412     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 234      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MDFLLLGLCLYWLLRRPSGVVLCLLGACFQMLPAAPSGCPQLCRCEGRLLYCEALNLTEAPHNLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNH 100
gnomAD_SAV:       RV #VR  LP K  PR      EV   T  VT R FS   W  E    R G SF #E N   S      S  RF   #VD LSE I V  F     Y
Conservation:  1203222222423142232222222222222222232354545355647422555473234522222234524445354663545376536815565563
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                  
SS_PSIPRED:       HHHHHHHHHHH    HHHHHHHHHHHHH            EEE  EEEE                EEE                     EEE     
SS_SPIDER3:      HHHHHHHHHHH      HHHHHHHHHHHH            EEE EEEEE      E         EEE    E  E             EEE     
SS_PSSPRED:      HHHHHHHHHHHHH    EEHHHHHHHHHH            EEE  EEEEE               EEE           HHH      EEEE     
DO_DISOPRED3:  BBBBBBBBBBDDDDDDDDDDDDDDDDDDDDD                                                                     
DO_SPOTD:      DDDDDDDDDDDDDD  D  DDDDDDDDDD                                                                       
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                             N      N                                     

                       10        20        30        40        50        60        70        80        90     
AA:            ICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSL 200
gnomAD_SAV:     RFL #GT    S#   H     E I  S#   W     HT           G E         #  I #S       L       V#   M H H RT 
Conservation:  4451531551264242283176338735772235662346337336638439547512780353253323115445142633752394033233447811
SS_PSIPRED:      EE            EEE                     EEE                     EEE                     EEE         
SS_SPIDER3:     EEE            EEE       E             EEE    E  E    HH       EEE    E  E             EEE    E  E 
SS_PSSPRED:         HHHH       EEE                     EEE          HHHH       EE        EE  HHH                   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                   N                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            ARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRIL 300
gnomAD_SAV:       C T  S  IK R QNS  IN#   Q    V   L    K  A T  R    LS  V       Q Q#         L       YF C I V# Q  
Conservation:  3673583222254418425222222222233734423537453553632545627636432642320010001114364065335422222253335311
SS_PSIPRED:                EEE                     EEE      HHHHH         EEE                     EEE            HH
SS_SPIDER3:                EEE       E    H        EEE    EEEEH H         EEE      EE    HH       EEE          HHHH
SS_PSSPRED:     HHHH       EEE          HHHH       EEE     EEHHHHHH        E                      EEE          HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NSWKSLTSITLAGNLWDCGRNVCALASWLNNFQGRYDGNLQCASPEYAQGEDVLDAVYAFHLCEDGAEPTSGHLLSAVTNRSDLGPPASSATTLADGGEG 400
BenignSAV:                                  S       S                                                              
gnomAD_SAV:     C RF  N NQ#R P   E KM    L  S  H #H S M *PR D T   E P#V#H YN     VQA     F#SI  C   EL      K T D KA
Conservation:  2414475455545364255744543646764553554153323151242234233221342241222423323332234231224484749668745729
SS_PSIPRED:           EEE           HHHHHHHHHH         EE   HHH    HHH  HHH                                        
SS_SPIDER3:           EEEE            HHHHHHH      E  EEE   HHH   E EH  HHH E       E                              
SS_PSSPRED:    H      EEEE          HHHHHHHHHH        EE   HHHH    HHH  HHHH                                       
DO_DISOPRED3:                                                                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                       DDD             DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                               DD       DDDDDDDDDDDDDDD
CARBOHYD:                                                                                     N                    

                       10        20        30        40        50        60        70        80        90     
AA:            QHDGTFEPATVALPGGEHAENAVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPASLRQLRQCFVTQRRKQKQKQTMHQMAAMSAQEYYVDYKPNHIEGA 500
gnomAD_SAV:    P YR    T  T # AK    # #  RA     TFM         V  F   #   F R     GR  K P    N   T  I  R          T A 
Conservation:  6434376358555462222256455244544665946743762342394125474421553163433644344345555663644552376543366639
STMI:                                     MMMMMMMMMMMMMMMMMMMMM                                                    
SS_PSIPRED:                      HH    EEHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH          
SS_SPIDER3:                          HHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHH H          HHHHHHHHHHH    E E        
SS_PSSPRED:                           EEEEEHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH           
DO_DISOPRED3:  DDDDDDDDDDDDDDDD                                                 DDDDDDDDDDDDDDDDD                  
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                
DO_IUPRED2A:   DD  DDDDDDDD                                                              DDDD                      

                       10        20  
AA:            LVIINEYGSCTCHQQPARECEV 522
gnomAD_SAV:       V      P Q   VK* * 
Conservation:  6439454653542367533653
SS_PSIPRED:    EEEE      EEEE        
SS_SPIDER3:    EEEE   E EEEEE   EE   
SS_PSSPRED:    EEEEE    EEE          
DO_DISOPRED3:                       D
DO_SPOTD:                            
DO_IUPRED2A: