Q86X52  CHSS1_HUMAN

Gene name: CHSY1   Description: Chondroitin sulfate synthase 1

Length: 802    GTS: 1.982e-06   GTS percentile: 0.647     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 5      gnomAD_SAV: 383      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPRRRASPEGCRSGQAAASQAGGARGDARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQT 100
gnomAD_SAV:                 F  I   A V  F   Q P                     E      #  N LRV F LT      R    D F    IS       
Conservation:  2222222222222222222221100211122222222202222222222222222002222222000000222001100001000111110200010100
STMI:                 MMMMMMMMMMMMMMMMMMMMM                                                                        
SS_PSIPRED:         HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                HHHH                              EEEEEE  HHHHHH
SS_SPIDER3:           HHHHHHHHHHHHHHHHHHHHHHHHHHHHH                HH HH                       E    EEEEEEE  HHHHHH
SS_PSSPRED:         HHHHHHHHHHHHHHHHHHHHHHHH HHHHHH                 HHHH                            EEEEEEE  HHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDD         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    D                     
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                    
DO_IUPRED2A:                                     DDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDD                       

                       10        20        30        40        50        60        70        80        90     
AA:            RAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTG 200
gnomAD_SAV:     VAVV     E VH R H SLNDV GP#      #VQ  G   L  R   VLIRF  N F V C         MF T YC *SL #G    D R      
Conservation:  1102101313113321332364142112132633242333332342324432332232132312242344333323253797297757777363566999
SS_PSIPRED:    HHHHHHHHHHH    EEEEEE                        HHHHHHHHHHHHHH HHH  EEEEE   EEE HHHHHHHHH       EE     
SS_SPIDER3:    HHHHHHHHHHHH   EEEEEEEE                       HHHHHHHHHHHHH      EEEE    E E HHHHHHHHH       EEEE   
SS_PSSPRED:    HHHHHHHHHHH    EEEEEE                       HHHHHHHHHHHHHHHH HHHEEEEEE    EE HHHHHHHHHH             
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                 DD  DDDDD                                                             
CARBOHYD:                                                                                              N           

                       10        20        30        40        50        60        70        80        90     
AA:            LGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHQA 300
gnomAD_SAV:       M          SD   LV   MT  Q#A Q V LRV R  W               W#  EMR        H  H   K  QT  V   R T     
Conservation:  7942396969799797679777976659565655647755268356553335446866859544335246546979979999467497747876464626
SS_PSIPRED:       HH                   EEE HHHHHHHHHHHHHH        HHHHHHHHHHHH        HHHHHHHH    HH    HHH     EEEE
SS_SPIDER3:        HH           EE     EEE HHHHHHHHH HHHH        HHHHHHHHHHHH             HEE           HH     HEEE
SS_PSSPRED:                            EEE HHHHHHHHHHHHHHHHH      HHHHHHHHHHHH      HHHHHHHHHHHHHH          HHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:         D                                                                                            D

                       10        20        30        40        50        60        70        80        90     
AA:            ITLHPNKNPPYQYRLHSYMLSRKISELRHRTIQLHREIVLMSKYSNTEIHKEDLQLGIPPSFMRFQPRQREEILEWEFLTGKYLYSAVDGQPPRRGMDSA 400
BenignSAV:                                                       R       S                                         
gnomAD_SAV:           T  DE S Y# V  #T TKF#RC  L   K   I  C   DVNE #     S FSVK   H QD MV       N F L   S LRQG  G T
Conservation:  6888988364596888464844454498547649688342554643143145624592265632636225235468685545445422433454543333
SS_PSIPRED:    EEE     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                 HHH      HHHH EEE                     HH
SS_SPIDER3:    EEE      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       H        H H       HHH  E  EE   EEEE            HH
SS_PSSPRED:    HHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                         HHHHHHHH     EEEE            HH
DO_DISOPRED3:                                         D       D  DDDD                                              
DO_SPOTD:                                                  DDDD                                                    
DO_IUPRED2A:                                                                                                DDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            QREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFVEHEELDAQELAKRINQE 500
BenignSAV:                                              T                                                          
gnomAD_SAV:     T S  #V TEI  LNS  T  G H   C     #*CWM RTC    L      HR  N   #  L T RV V  AY T RS VR K  SRQ  RK YH 
Conservation:  4416776555869849839774997467876669995655944976666987899778697559789899788983996344181334630153213414
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHH    EEHHHHEEEEE       HHHHHHHHHHEE          EEEHHHHH               HHHHHHHHH  
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHH    EHEHEE EEEEE     EEEEEEEEEEEE    EEEE  EEEEEEEE           H HHHHHHHHH    
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHEEE      EHHHHHHHH           HHHHHHHHHHH              HHHHHHHH   
DO_DISOPRED3:                                                                                  DDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   D                                                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            SGSLSFLSNSLKKLVPFQLPGSKSEHKEPKDKKINILIPLSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADMQ 600
PathogenicSAV:                                       R                                                             
BenignSAV:                       I                                                                                 
gnomAD_SAV:         L   T Q  I#LEI  LN  Q   RE NL    A P #CN  M #     #M V SSL IR      D Y T E   E Q VT  L T  E VT#
Conservation:  2254563748843644523211104012213286648597279554827981669448734355758264873132324203623952473067716652
SS_PSIPRED:         HH     EEE                 EEEEEEE    HHHHHHHHHHHHHHH      EEEEEEEE     HHHHHHHHHHHHHHHH      E
SS_SPIDER3:        HHH      E E               EEEEEEEEE   HHHHHHHHHHHHHH       EEEEEEEE     HHHHHHHHHHHHHHHH     EE
SS_PSSPRED:                                    EEEEEEE    HHHHHHHHHHHHHHH      EEEEEEEE     HHHHHHHHHHHHHHHH      E
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDD DD                                                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                        DD DD                                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            ILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYK 700
BenignSAV:                                                        H                                                
gnomAD_SAV:    V L#C#  L PP       R  SA  I   NIN M   G     * DI   KEM   VV       F CCAR R ESYSVV H   C       V  VCR
Conservation:  6245171999746943755351747997699898484265649992862363549796698996966421422203417466135979838979759558
SS_PSIPRED:    EEE      HHHHHHHHHHH     EEEEEE   EE HHHHHHHHHH     EEEEEEE                                    EEEEH
SS_SPIDER3:    EEEE     HHHHHHHHHHH    EEEEEE    E  HHHHHHHHHH E   EEEEEEEEHH   HH                    E      EEEEEH
SS_PSSPRED:    EEE      HHHHHHHHHHH     EEEEE   EEE HHHHHHHHHH     EEEE   EE     EE                   E      EEEEEH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                         D                                                                   
CARBOHYD:                            N                                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            GDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEMWLEKNDPSYSKSSNNNGSVR 800
gnomAD_SAV:    E   Q S L L   A           I      M     I#A  IYRS    RS  SQKF          CV SE  VKI VG KYA    RG  SV L 
Conservation:  3973149788499699989999873954148523898573755955867197547346957796886855369315976486384212433222233522
SS_PSIPRED:    HHHHHH             HHHHHHHHHH   EEEEE     EEEE          HHHHHHHHHHH      HHHHHHHHHH       HHH       
SS_SPIDER3:    HHHHH               HHHHHHHHH   EEEEE     EEEEEE        HHHHHHHHH  H     HHHHHHHHH                  
SS_PSSPRED:    HHHHH              HHHHHHHHHHH  EEEEE     EEEEE         HHHHHHHHHHHH     HHHHHHHHHHH                
DO_DISOPRED3:                                                                                        DDDDDDDDDDDDDD
DO_SPOTD:                                                                                           DDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                          D  DDDDDDDDDD
METAL:                                                       H                                                     
CARBOHYD:                                                                                                     N    

                 
AA:            TA 802
gnomAD_SAV:     V
Conservation:  51
SS_PSIPRED:      
SS_SPIDER3:      
SS_PSSPRED:      
DO_DISOPRED3:  DD
DO_SPOTD:      DD
DO_IUPRED2A:   DD