Q86YV9  HPS6_HUMAN

Gene name: HPS6   Description: Hermansky-Pudlak syndrome 6 protein

Length: 775    GTS: 1.279e-06   GTS percentile: 0.345     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 5      BenignSAV: 6      gnomAD_SAV: 410      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MKRSGTLRLLSDLSAFGGAARLRELVAGDSAVRVRGSPDGRHLLLLRPPGAVAPQLLVASRGPGAELERAWPAGQPSPLDAFFLPWPARPALVLVWESGL 100
PathogenicSAV: V                                                                                                   
gnomAD_SAV:    L  L I     E# T        K  PRY V    D AEA    PM    #G                G  AS    Q      Q       L M Q   
Conservation:  8211115222333223213004131300101114304543244342121224111125333211126230521021124533341110112434523272
SS_PSIPRED:         HHHHHH HHH   HHHHHHHH      EEEE     EEEEE        EEEEEE                  EEEEE       EEEEEE    
SS_SPIDER3:            EH  H H  HHHHHHHHH      EEEE     EEEEEE       EHEEE                   EHEEE       EEEEEEE   
SS_PSSPRED:        HHHHHHHHHHHH  HHHHHHHHH     EEEE     EEEEE        HHHHHH                   EEEE       EEEEEE    
DO_DISOPRED3:  DDDDDDDDDD                                                                                          
DO_SPOTD:      DDDDDD                                                                                              
DO_IUPRED2A:                                                                      DDDD                             

                       10        20        30        40        50        60        70        80        90     
AA:            AEVWGAGVGPGWRPLQSTELCPGGGARVVAVAALRGRLVWCEERQARAEGPSGSPAAAFSHCVCVRTLEPSGEASTSLGRTHVLLHHCPAFGLLASCRQL 200
BenignSAV:                                     V                  L                                                
gnomAD_SAV:           L    WL P      CR S  LT  V P   M    W V  #R L   V  V Y    W    I DTG #  LA     PYT  W  V  K  
Conservation:  3447111203471345323770232746253520310638675452331101111121523457173332125023165121536655905043442204
SS_PSIPRED:    EEEEE       EE EEE        EEEEEEEE  EEEEE                  EEEEEEE              EEEEEE      EEEE   E
SS_SPIDER3:    EEEEEE     EEEEEEE        EEEEEEEE  EEEEEEE                 EEEEEEE       EEEE  EEEEEE     EEEE    E
SS_PSSPRED:    EEEE        E            EEEEEEE     EEEE                  EEEEE                EEEEEE      EEE    E
DO_DISOPRED3:                                                DDDDDDDD                                              
DO_SPOTD:                                                    DDDDDDDD                                              
DO_IUPRED2A:                                                     DD                                                

                       10        20        30        40        50        60        70        80        90     
AA:            FLVPTATTWPGVAHVLLIWSPGKGKVMVAAPRLGLSYSKSLNPGRGDTWDFRTLLRGLPGLLSPREPLAVHTWAPTPQGLLLLDFGGTVSLLQSHGGTRA 300
PathogenicSAV:                                                            E           I  S                         
BenignSAV:               A                     R                                                                   
gnomAD_SAV:     M     AGRSM YF      VN #MI   RQR PFCR  VKT    A N W   Q#  E RF S S V P   SASHS      R A       D MQS
Conservation:  6748301201232345627161131424233103121131312112211883285133372621112434322431134765520181512521582161
SS_PSIPRED:    EEE         EEEEEEEE    EEEEEE    EEE          HHHHHHHH              EEEE      EEEEE   EEEEEE     EE
SS_SPIDER3:    EE         EEEEEEEEE    EEEEEE     EEEEE         HHHHHH    EEEE     EEEEEEE    EEEEE    EEEE     EEE
SS_PSSPRED:    EE         EEEEEEEE     EEEEEE     EE           HHHHHHHHH           EEEEE      EEEEE    EEEEE    EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                       D                               

                       10        20        30        40        50        60        70        80        90     
AA:            VGTLQEAPVGPWGSAALGTFQGTLACVLGSTLELLDMGSGQLLERKVLSTDRVHLLEPPAPGMEDEEELETRGNLRLLSALGLFCVGWEAPQGVELPSAK 400
gnomAD_SAV:    MD  P V#  LL FGT RA R   TS  S IWQ  NV  R #   NIIGR S R   L#VASV    K   *EI #        S   A#   A  S #N
Conservation:  5215111121010121512313355632311747452148344441262121334220111112001111111143452329670300100000212131
SS_PSIPRED:    EEEE          EEEEE   HHHHHH  EEEEEE    HHHEEE     EEEE          HHHHHH   EEEE     EEEEEE         HH
SS_SPIDER3:    EEEE          EEEEEE  HEEEEE  EEEEEE     EEEEEE     EEEE         HHHHHH   EEEEEH   EEEEEE         HH
SS_PSSPRED:    EEE          EEEEEE  HHHHHHH  EEEEEE     HHHHHH     EEEE          HHHHH     EE     EEEEE         HHH
DO_DISOPRED3:                                                                 D                                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:     DD                                                 DDDDDDDDDDDDDDDDD                              

                       10        20        30        40        50        60        70        80        90     
AA:            DLVFEEACGYYQRRSLRGAQLTPEELRHSSTFRAPQALASILQGHLPPSALLTMLRTELRDYRGLEQLKAQLVAGDDEEAGWTELAEQEVARLLRTELIG 500
BenignSAV:                       T                                                                                 
gnomAD_SAV:    E   QG  R  #QQ  WDV        R N  Q  R     I      C#P N# K K W  #         M VGA DVD I  VV K VC    V  R
Conservation:  3386798837995989443488542752433877943744663223221283115118742413761492145143213225218542941966135413
SS_PSIPRED:    HHHHHHHHHHHHHH        HHHH       HHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHEE   HHHHHHHHHHHHHHHHHH      
SS_SPIDER3:    HHHHHHHHHHHHHH        HHHH      HHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHH E   HHH  HHHHHHHHHHHHH     H
SS_PSSPRED:    HHHHHHHHHHHHHHH       HHHHH     HHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHH   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                             D                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            DQLAQLNTVFQALPTAAWGATLRALQLQLDGNGKLRSQAPPDVWKKVLGGITAGKEPPNGILPPFELLCQCLCQLEPRWLPPFVELAQQQGGPGWGAGGP 600
PathogenicSAV:                                                                 V                                   
gnomAD_SAV:     HV *   I   F       A T#  #    S R GF*P L   Q L R#KIT RDT SV MSL     R V     Q    LLD    H RL#L TE S
Conservation:  5182658258227914492533127575143370425474365972671210000001261364898592343254928970765559341313632422
SS_PSIPRED:     HHHHHHHHHHH  HHHHHHHHHHHH              HHHHHHHH               HHHHHHHHHHH      HHHHHHHHHH          
SS_SPIDER3:    HHHHHHHHHHHH  HHHHHHHHHHH   E     EEE   HHHHHHHH               HHHHHHHHHH      HHHHHHHHHH           
SS_PSSPRED:    HHHHHHHHHHHH HHHHHHHHHHHHHH       EE     HHHHHHH               HHHHHHHHHHH       HHHHHHHHH          
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                  DDD                                        D         

                       10        20        30        40        50        60        70        80        90     
AA:            GLPLYRRALAVLGEEGTRPEALELELLLSSGRPKAVLQAVGQLVQKEQWDRALDAGLALGPSSPLLRSEIFKLLLAEFAQHRRLDAHLPLLCRLCPPELA 700
BenignSAV:                                                                                 K                       
gnomAD_SAV:    #P#VDC*VV   DG R        K P    Q EG  E  R   R K RGP VVV    S  G   #    T  V K  * SQ Y  FLI  C   S   
Conservation:  3299979962562101022234566698382994866895229401329345324623441266863686932792644479299474216417993633
SS_PSIPRED:      HHHHHHHHHH      HHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHH    HHHHHHHHHH      
SS_SPIDER3:       HHHHHHHHH      HHHHHHHHHHH   HHHHHHHHHHHHH   HHHHHHHHHHH     HHHHHHHHHHHHHHHH     HHHHHHHH       
SS_PSSPRED:       HHHHHHHHH      HHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHH  HHHHHHHHHHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70     
AA:            PAELLLLLRTYLPDEVGPPTPFPEPGAEPPLTVGLLKALLEQTGAQGWLSGPVLSPYEDILWDPSTPPPTPPRDL 775
gnomAD_SAV:     TKV F  K #F  D ES # SS S  G L#     N P  # VV RCPL T VRL#      T    A # Q V
Conservation:  323582354133511011209613010223774657749815322121022111214232732212685364521
SS_PSIPRED:    HHHHHHHHHHH                     HHHHHHHHHHHH            HHHHH              
SS_SPIDER3:    HHHHHHHHHHH                     HHHHHHHHHHHHH           HHHHH              
SS_PSSPRED:    HHHHHHHHHHH                     HHHHHHHHHHHHH          HHHHHH              
DO_DISOPRED3:                  DDDDDDDDDDDDD            DDD DDDDDDD     DD    DDDDDDDDDDDD
DO_SPOTD:                                                                            DDDDD
DO_IUPRED2A:                   DDDDDDDDDDDD    D                          DDDDDDDDDDDDDDDD